RNA–Protein interactions for RNA: ENST00000357769.4

THSD4-203, Transcript of thrombospondin type 1 domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene THSD4, Length 3,403 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-203ENST00000357769 URB2Q14146 1524 aaKnown RBP14.11□□□□□ -0.15
THSD4-203ENST00000357769 ARID3CA6NKF2 412 aa14.1□□□□□ -0.15
THSD4-203ENST00000357769 KIF21AQ7Z4S6 1674 aa14.1□□□□□ -0.15
THSD4-203ENST00000357769 BCANQ96GW7 911 aa14.09□□□□□ -0.15
THSD4-203ENST00000357769 PRXQ9BXM0 1461 aa14.09□□□□□ -0.15
THSD4-203ENST00000357769 RAD54L2Q9Y4B4 1467 aa14.08□□□□□ -0.16
THSD4-203ENST00000357769 ERICH3Q5RHP9 1530 aa14.07□□□□□ -0.16
THSD4-203ENST00000357769 IGF1RP08069 1367 aa14.05□□□□□ -0.16
THSD4-203ENST00000357769 ABCA10Q8WWZ4 1543 aa14.05□□□□□ -0.16
THSD4-203ENST00000357769 DDX10Q13206 875 aaKnown RBP14.03□□□□□ -0.16
THSD4-203ENST00000357769 MRC2Q9UBG0 1479 aa14.02□□□□□ -0.16
THSD4-203ENST00000357769 CARMIL1Q5VZK9 1371 aa14.02□□□□□ -0.16
THSD4-203ENST00000357769 ARHGAP35Q9NRY4 1499 aa14.02□□□□□ -0.17
THSD4-203ENST00000357769 CCNB3Q8WWL7 1395 aa14.02□□□□□ -0.17
THSD4-203ENST00000357769 ERCC6Q03468 1493 aa14.02□□□□□ -0.17
THSD4-203ENST00000357769 RAB3GAP2Q9H2M9 1393 aa13.99□□□□□ -0.17
THSD4-203ENST00000357769 TDRD9Q8NDG6 1382 aaKnown RBP13.97□□□□□ -0.17
THSD4-203ENST00000357769 CNGB1Q14028 1251 aaPredicted RBP13.95□□□□□ -0.18
THSD4-203ENST00000357769 PHLDB1Q86UU1 1377 aa13.95□□□□□ -0.18
THSD4-203ENST00000357769 FHOD3Q2V2M9 1422 aa13.94□□□□□ -0.18
THSD4-203ENST00000357769 GAPVD1Q14C86 1478 aa13.94□□□□□ -0.18
THSD4-203ENST00000357769 TRIM52Q96A61 297 aa13.93□□□□□ -0.18
THSD4-203ENST00000357769 WDR97A6NE52 1622 aa13.92□□□□□ -0.18
THSD4-203ENST00000357769 SUPT16HQ9Y5B9 1047 aaKnown RBP13.92□□□□□ -0.18
THSD4-203ENST00000357769 CHIC2Q9UKJ5 165 aa13.91□□□□□ -0.18
THSD4-203ENST00000357769 WDR62O43379 1518 aa13.91□□□□□ -0.18
THSD4-203ENST00000357769 CUL7Q14999 1698 aa13.9□□□□□ -0.18
THSD4-203ENST00000357769 TARBP1Q13395 1621 aaKnown RBP13.89□□□□□ -0.19
THSD4-203ENST00000357769 ABCA5Q8WWZ7 1642 aa13.89□□□□□ -0.19
THSD4-203ENST00000357769 IFT140Q96RY7 1462 aa13.88□□□□□ -0.19
THSD4-203ENST00000357769 RRBP1Q9P2E9 1410 aaKnown RBP13.87□□□□□ -0.19
THSD4-203ENST00000357769 AQRO60306 1485 aaKnown RBP eCLIP13.84□□□□□ -0.19
THSD4-203ENST00000357769 SENP3-EIF4A1A0A087X0R7 540 aa13.84□□□□□ -0.19
THSD4-203ENST00000357769 RRP7BPQ9NSQ0 103 aa13.83□□□□□ -0.2
THSD4-203ENST00000357769 THOC2Q8NI27 1593 aaKnown RBP13.82□□□□□ -0.2
THSD4-203ENST00000357769 FKBP8Q14318 412 aa13.81□□□□□ -0.2
THSD4-203ENST00000357769 SETD5Q9C0A6 1442 aa13.81□□□□□ -0.2
THSD4-203ENST00000357769 GRIN2BQ13224 1484 aa13.81□□□□□ -0.2
THSD4-203ENST00000357769 FOXD1Q16676 465 aa13.8□□□□□ -0.2
THSD4-203ENST00000357769 IRX6P78412 446 aaPredicted RBP13.8□□□□□ -0.2
THSD4-203ENST00000357769 MAPKBP1O60336 1514 aa13.8□□□□□ -0.2
THSD4-203ENST00000357769 LRRC9Q6ZRR7 1453 aa13.79□□□□□ -0.2
THSD4-203ENST00000357769 ZNF608Q9ULD9 1512 aaPredicted RBP13.79□□□□□ -0.2
THSD4-203ENST00000357769 FHAD1B1AJZ9 1412 aa13.78□□□□□ -0.2
THSD4-203ENST00000357769 PBRM1Q86U86 1689 aa13.78□□□□□ -0.2
THSD4-203ENST00000357769 CLSPNQ9HAW4 1339 aa13.78□□□□□ -0.2
THSD4-203ENST00000357769 TIAM1Q13009 1591 aa13.77□□□□□ -0.2
THSD4-203ENST00000357769 PCF11O94913 1555 aaKnown RBP13.76□□□□□ -0.21
THSD4-203ENST00000357769 MTUS2Q5JR59 1369 aa13.75□□□□□ -0.21
THSD4-203ENST00000357769 CTTNBP2Q8WZ74 1663 aa13.75□□□□□ -0.21
THSD4-203ENST00000357769 ADAMTS12P58397 1594 aa13.72□□□□□ -0.21
THSD4-203ENST00000357769 EIF4G3O43432 1585 aaKnown RBP13.72□□□□□ -0.21
THSD4-203ENST00000357769 EFCAB5A4FU69 1503 aa13.71□□□□□ -0.21
THSD4-203ENST00000357769 POLR3GLQ9BT43 218 aa13.71□□□□□ -0.21
THSD4-203ENST00000357769 TONSLQ96HA7 1378 aa13.71□□□□□ -0.22
THSD4-203ENST00000357769 SNAPC4Q5SXM2 1469 aa13.7□□□□□ -0.22
THSD4-203ENST00000357769 TSHZ2Q9NRE2 1034 aa13.7□□□□□ -0.22
THSD4-203ENST00000357769 PPP1R15AO75807 674 aaPredicted RBP13.68□□□□□ -0.22
THSD4-203ENST00000357769 ANP32CO43423 234 aa13.68□□□□□ -0.22
THSD4-203ENST00000357769 CHMP7Q8WUX9 453 aaPredicted RBP13.68□□□□□ -0.22
THSD4-203ENST00000357769 PTPRKQ15262 1439 aa13.68□□□□□ -0.22
THSD4-203ENST00000357769 FBLN2P98095 1184 aa13.67□□□□□ -0.22
THSD4-203ENST00000357769 MAGI1Q96QZ7 1491 aaPredicted RBP13.66□□□□□ -0.22
THSD4-203ENST00000357769 ZNF326Q5BKZ1 582 aaKnown RBP13.65□□□□□ -0.22
THSD4-203ENST00000357769 FMN1Q68DA7 1419 aa13.65□□□□□ -0.22
THSD4-203ENST00000357769 IQGAP2Q13576 1575 aa13.63□□□□□ -0.23
THSD4-203ENST00000357769 HNRNPUQ00839 825 aaKnown RBP eCLIP13.63□□□□□ -0.23
THSD4-203ENST00000357769 GRIN2AQ12879 1464 aa13.63□□□□□ -0.23
THSD4-203ENST00000357769 SYNJ2O15056 1496 aa13.62□□□□□ -0.23
THSD4-203ENST00000357769 FGD6Q6ZV73 1430 aa13.61□□□□□ -0.23
THSD4-203ENST00000357769 NEFLP07196 543 aa13.6□□□□□ -0.23
THSD4-203ENST00000357769 CCDC184Q52MB2 194 aa13.6□□□□□ -0.23
THSD4-203ENST00000357769 CCDC18Q5T9S5 1454 aa13.6□□□□□ -0.23
THSD4-203ENST00000357769 SAMD9Q5K651 1589 aa13.6□□□□□ -0.23
THSD4-203ENST00000357769 ZNF777Q9ULD5 760 aaPredicted RBP13.6□□□□□ -0.23
THSD4-203ENST00000357769 FYCO1Q9BQS8 1478 aa13.59□□□□□ -0.23
THSD4-203ENST00000357769 KIAA0586Q9BVV6 1533 aa13.59□□□□□ -0.23
THSD4-203ENST00000357769 ZNF644Q9H582 1327 aaPredicted RBP13.59□□□□□ -0.23
THSD4-203ENST00000357769 CASKIN1Q8WXD9 1431 aa13.59□□□□□ -0.23
THSD4-203ENST00000357769 MAP3K1Q13233 1512 aa13.59□□□□□ -0.23
THSD4-203ENST00000357769 FAM9BQ8IZU0 186 aa13.58□□□□□ -0.23
THSD4-203ENST00000357769 HSPA5P11021 654 aaKnown RBP13.57□□□□□ -0.24
THSD4-203ENST00000357769 NCOA2Q15596 1464 aa13.55□□□□□ -0.24
THSD4-203ENST00000357769 UGGT2Q9NYU1 1516 aa13.54□□□□□ -0.24
THSD4-203ENST00000357769 C11orf95C9JLR9 678 aaPredicted RBP13.53□□□□□ -0.24
THSD4-203ENST00000357769 L3MBTL2Q969R5 705 aa13.52□□□□□ -0.25
THSD4-203ENST00000357769 WASHC2AQ641Q2 1341 aa13.51□□□□□ -0.25
THSD4-203ENST00000357769 CFAP43Q8NDM7 1665 aa13.51□□□□□ -0.25
THSD4-203ENST00000357769 CDK13Q14004 1512 aaKnown RBP13.51□□□□□ -0.25
THSD4-203ENST00000357769 NAIPQ13075 1403 aa13.5□□□□□ -0.25
THSD4-203ENST00000357769 CEP170Q5SW79 1584 aa13.5□□□□□ -0.25
THSD4-203ENST00000357769 NUP160Q12769 1436 aa13.5□□□□□ -0.25
THSD4-203ENST00000357769 JPH4Q96JJ6 628 aa13.49□□□□□ -0.25
THSD4-203ENST00000357769 MPHOSPH9Q99550 1183 aa13.48□□□□□ -0.25
THSD4-203ENST00000357769 MAGI3Q5TCQ9 1506 aa13.48□□□□□ -0.25
THSD4-203ENST00000357769 CARMIL2Q6F5E8 1435 aa13.48□□□□□ -0.25
THSD4-203ENST00000357769 MYOM3Q5VTT5 1437 aa13.47□□□□□ -0.25
THSD4-203ENST00000357769 KIAA0556O60303 1618 aa13.47□□□□□ -0.25
THSD4-203ENST00000357769 DISP1Q96F81 1524 aa13.46□□□□□ -0.25
THSD4-203ENST00000357769 SLC4A1APQ9BWU0 796 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms