RNA–Protein interactions for RNA: ENST00000357710.8

PSEN1-202, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-202ENST00000357710 ERCC6Q03468 1493 aa16.04■□□□□ 0.16
PSEN1-202ENST00000357710 MSH5O43196 834 aa16.03■□□□□ 0.16
PSEN1-202ENST00000357710 RUSC2Q8N2Y8 1516 aa16.03■□□□□ 0.16
PSEN1-202ENST00000357710 POLA1P09884 1462 aaPredicted RBP16.02■□□□□ 0.16
PSEN1-202ENST00000357710 CCER1Q8TC90 406 aaPredicted RBP16■□□□□ 0.15
PSEN1-202ENST00000357710 KIF27Q86VH2 1401 aa15.99■□□□□ 0.15
PSEN1-202ENST00000357710 WDR62O43379 1518 aa15.99■□□□□ 0.15
PSEN1-202ENST00000357710 MIER1Q8N108 512 aa15.98■□□□□ 0.15
PSEN1-202ENST00000357710 THOC2Q8NI27 1593 aaKnown RBP15.96■□□□□ 0.15
PSEN1-202ENST00000357710 CUX2O14529 1486 aa15.96■□□□□ 0.15
PSEN1-202ENST00000357710 ABCA10Q8WWZ4 1543 aa15.96■□□□□ 0.15
PSEN1-202ENST00000357710 LOC105371045A0A1W2PR82 267 aa15.96■□□□□ 0.15
PSEN1-202ENST00000357710 WDR97A6NE52 1622 aa15.95■□□□□ 0.14
PSEN1-202ENST00000357710 KIF21BO75037 1637 aa15.94■□□□□ 0.14
PSEN1-202ENST00000357710 RAD54L2Q9Y4B4 1467 aa15.93■□□□□ 0.14
PSEN1-202ENST00000357710 RANGAP1P46060 587 aaPredicted RBP15.92■□□□□ 0.14
PSEN1-202ENST00000357710 NCBP3Q53F19 620 aaKnown RBP15.92■□□□□ 0.14
PSEN1-202ENST00000357710 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.91■□□□□ 0.14
PSEN1-202ENST00000357710 GOLGA3Q08378 1498 aa15.9■□□□□ 0.14
PSEN1-202ENST00000357710 TARBP1Q13395 1621 aaKnown RBP15.89■□□□□ 0.13
PSEN1-202ENST00000357710 ABCA5Q8WWZ7 1642 aa15.85■□□□□ 0.13
PSEN1-202ENST00000357710 ERICH3Q5RHP9 1530 aa15.85■□□□□ 0.13
PSEN1-202ENST00000357710 EHMT2Q96KQ7 1210 aa15.85■□□□□ 0.13
PSEN1-202ENST00000357710 IFT140Q96RY7 1462 aa15.84■□□□□ 0.13
PSEN1-202ENST00000357710 PRXQ9BXM0 1461 aa15.84■□□□□ 0.13
PSEN1-202ENST00000357710 PDE4CQ08493 712 aa15.84■□□□□ 0.13
PSEN1-202ENST00000357710 ARXQ96QS3 562 aa15.84■□□□□ 0.13
PSEN1-202ENST00000357710 PDIA4P13667 645 aaKnown RBP15.82■□□□□ 0.12
PSEN1-202ENST00000357710 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.81■□□□□ 0.12
PSEN1-202ENST00000357710 RAPGEF2Q9Y4G8 1499 aa15.8■□□□□ 0.12
PSEN1-202ENST00000357710 CUL7Q14999 1698 aa15.8■□□□□ 0.12
PSEN1-202ENST00000357710 GAPVD1Q14C86 1478 aa15.8■□□□□ 0.12
PSEN1-202ENST00000357710 IGF1RP08069 1367 aa15.79■□□□□ 0.12
PSEN1-202ENST00000357710 TNIKQ9UKE5 1360 aa15.79■□□□□ 0.12
PSEN1-202ENST00000357710 RSPH6AQ9H0K4 717 aa15.78■□□□□ 0.12
PSEN1-202ENST00000357710 TDRD9Q8NDG6 1382 aaKnown RBP15.77■□□□□ 0.12
PSEN1-202ENST00000357710 PBRM1Q86U86 1689 aa15.77■□□□□ 0.11
PSEN1-202ENST00000357710 FGD1P98174 961 aa15.76■□□□□ 0.11
PSEN1-202ENST00000357710 UBTFP17480 764 aaKnown RBP15.76■□□□□ 0.11
PSEN1-202ENST00000357710 ZMYND15Q9H091 742 aa15.75■□□□□ 0.11
PSEN1-202ENST00000357710 IL27Q8NEV9 243 aa15.75■□□□□ 0.11
PSEN1-202ENST00000357710 C11orf95C9JLR9 678 aaPredicted RBP15.75■□□□□ 0.11
PSEN1-202ENST00000357710 CARMIL1Q5VZK9 1371 aa15.74■□□□□ 0.11
PSEN1-202ENST00000357710 EIF4G3O43432 1585 aaKnown RBP15.72■□□□□ 0.11
PSEN1-202ENST00000357710 CEP162Q5TB80 1403 aa15.71■□□□□ 0.11
PSEN1-202ENST00000357710 ZNF608Q9ULD9 1512 aaPredicted RBP15.7■□□□□ 0.1
PSEN1-202ENST00000357710 GRIN2BQ13224 1484 aa15.7■□□□□ 0.1
PSEN1-202ENST00000357710 AQRO60306 1485 aaKnown RBP eCLIP15.7■□□□□ 0.1
PSEN1-202ENST00000357710 ADAMTS12P58397 1594 aa15.67■□□□□ 0.1
PSEN1-202ENST00000357710 RTL5Q5HYW3 569 aaPredicted RBP15.66■□□□□ 0.1
PSEN1-202ENST00000357710 AAMPQ13685 434 aa15.66■□□□□ 0.1
PSEN1-202ENST00000357710 FHAD1B1AJZ9 1412 aa15.63■□□□□ 0.09
PSEN1-202ENST00000357710 CLIP1P30622 1438 aa15.61■□□□□ 0.09
PSEN1-202ENST00000357710 TAF7LQ5H9L4 462 aa15.61■□□□□ 0.09
PSEN1-202ENST00000357710 CTTNBP2Q8WZ74 1663 aa15.61■□□□□ 0.09
PSEN1-202ENST00000357710 VSIG10Q8N0Z9 540 aa15.61■□□□□ 0.09
PSEN1-202ENST00000357710 FKBP8Q14318 412 aa15.6■□□□□ 0.09
PSEN1-202ENST00000357710 SNAPC4Q5SXM2 1469 aa15.6■□□□□ 0.09
PSEN1-202ENST00000357710 NOP58Q9Y2X3 529 aaKnown RBP15.6■□□□□ 0.09
PSEN1-202ENST00000357710 MAGI1Q96QZ7 1491 aaPredicted RBP15.6■□□□□ 0.09
PSEN1-202ENST00000357710 RTN4Q9NQC3 1192 aaKnown RBP15.59■□□□□ 0.09
PSEN1-202ENST00000357710 CDK11AQ9UQ88 783 aaPredicted RBP15.58■□□□□ 0.09
PSEN1-202ENST00000357710 RBM10P98175 930 aaKnown RBP15.56■□□□□ 0.08
PSEN1-202ENST00000357710 KLHL34Q8N239 644 aa15.55■□□□□ 0.08
PSEN1-202ENST00000357710 BCANQ96GW7 911 aa15.55■□□□□ 0.08
PSEN1-202ENST00000357710 WASHC2CQ9Y4E1 1318 aa15.53■□□□□ 0.08
PSEN1-202ENST00000357710 SYNJ2O15056 1496 aa15.52■□□□□ 0.08
PSEN1-202ENST00000357710 WASHC2AQ641Q2 1341 aa15.51■□□□□ 0.07
PSEN1-202ENST00000357710 GRIN2AQ12879 1464 aa15.51■□□□□ 0.07
PSEN1-202ENST00000357710 USP35Q9P2H5 1018 aa15.49■□□□□ 0.07
PSEN1-202ENST00000357710 EFCAB5A4FU69 1503 aa15.48■□□□□ 0.07
PSEN1-202ENST00000357710 BCL11BQ9C0K0 894 aaPredicted RBP15.48■□□□□ 0.07
PSEN1-202ENST00000357710 ARHGAP35Q9NRY4 1499 aa15.48■□□□□ 0.07
PSEN1-202ENST00000357710 A0A0U1RQG5 324 aaPredicted RBP15.47■□□□□ 0.07
PSEN1-202ENST00000357710 VPS8Q8N3P4 1428 aa15.47■□□□□ 0.07
PSEN1-202ENST00000357710 NBR1Q14596 966 aa15.47■□□□□ 0.07
PSEN1-202ENST00000357710 ARAP1Q96P48 1450 aa15.47■□□□□ 0.07
PSEN1-202ENST00000357710 IQGAP2Q13576 1575 aa15.46■□□□□ 0.07
PSEN1-202ENST00000357710 CHMP7Q8WUX9 453 aaPredicted RBP15.44■□□□□ 0.06
PSEN1-202ENST00000357710 RRP9O43818 475 aaKnown RBP15.43■□□□□ 0.06
PSEN1-202ENST00000357710 ZNF326Q5BKZ1 582 aaKnown RBP15.43■□□□□ 0.06
PSEN1-202ENST00000357710 SAMD9Q5K651 1589 aa15.42■□□□□ 0.06
PSEN1-202ENST00000357710 KIAA0586Q9BVV6 1533 aa15.41■□□□□ 0.06
PSEN1-202ENST00000357710 FAM43AQ8N2R8 423 aa15.41■□□□□ 0.06
PSEN1-202ENST00000357710 CEP170Q5SW79 1584 aa15.41■□□□□ 0.06
PSEN1-202ENST00000357710 CHD1O14646 1710 aa15.4■□□□□ 0.06
PSEN1-202ENST00000357710 NUP160Q12769 1436 aa15.4■□□□□ 0.06
PSEN1-202ENST00000357710 TIMELESSQ9UNS1 1208 aa15.39■□□□□ 0.05
PSEN1-202ENST00000357710 FBLN2P98095 1184 aa15.38■□□□□ 0.05
PSEN1-202ENST00000357710 UGGT2Q9NYU1 1516 aa15.37■□□□□ 0.05
PSEN1-202ENST00000357710 FHOD3Q2V2M9 1422 aa15.35■□□□□ 0.05
PSEN1-202ENST00000357710 ITGAEP38570 1179 aa15.32■□□□□ 0.04
PSEN1-202ENST00000357710 FMN1Q68DA7 1419 aa15.32■□□□□ 0.04
PSEN1-202ENST00000357710 KIAA0556O60303 1618 aa15.31■□□□□ 0.04
PSEN1-202ENST00000357710 HSP90AA2PQ14568 343 aaPredicted RBP15.3■□□□□ 0.04
PSEN1-202ENST00000357710 RSPH4AQ5TD94 716 aa15.3■□□□□ 0.04
PSEN1-202ENST00000357710 PCF11O94913 1555 aaKnown RBP15.3■□□□□ 0.04
PSEN1-202ENST00000357710 P3H3Q8IVL6 736 aa15.3■□□□□ 0.04
PSEN1-202ENST00000357710 FYCO1Q9BQS8 1478 aa15.28■□□□□ 0.04
PSEN1-202ENST00000357710 DISP1Q96F81 1524 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms