RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 PEG3Q9GZU2 1588 aa11.63□□□□□ -0.55
CDC42SE1-201ENST00000357235 RRBP1Q9P2E9 1410 aaKnown RBP11.63□□□□□ -0.55
CDC42SE1-201ENST00000357235 TOP2BQ02880 1626 aa11.62□□□□□ -0.55
CDC42SE1-201ENST00000357235 RBM19Q9Y4C8 960 aaKnown RBP11.62□□□□□ -0.55
CDC42SE1-201ENST00000357235 ANP32CO43423 234 aa11.58□□□□□ -0.56
CDC42SE1-201ENST00000357235 ARHGAP35Q9NRY4 1499 aa11.58□□□□□ -0.56
CDC42SE1-201ENST00000357235 ERICH3Q5RHP9 1530 aa11.58□□□□□ -0.56
CDC42SE1-201ENST00000357235 HMGXB3Q12766 1538 aa11.57□□□□□ -0.56
CDC42SE1-201ENST00000357235 MYT1LQ9UL68 1186 aa11.57□□□□□ -0.56
CDC42SE1-201ENST00000357235 SETD5Q9C0A6 1442 aa11.56□□□□□ -0.56
CDC42SE1-201ENST00000357235 CUX1P39880 1505 aa11.55□□□□□ -0.56
CDC42SE1-201ENST00000357235 IRX6P78412 446 aaPredicted RBP11.54□□□□□ -0.56
CDC42SE1-201ENST00000357235 PHLDB1Q86UU1 1377 aa11.53□□□□□ -0.56
CDC42SE1-201ENST00000357235 CUX2O14529 1486 aa11.52□□□□□ -0.56
CDC42SE1-201ENST00000357235 WDR97A6NE52 1622 aa11.52□□□□□ -0.56
CDC42SE1-201ENST00000357235 MAPKBP1O60336 1514 aa11.52□□□□□ -0.57
CDC42SE1-201ENST00000357235 MSH5O43196 834 aa11.52□□□□□ -0.57
CDC42SE1-201ENST00000357235 PPP1R15AO75807 674 aaPredicted RBP11.51□□□□□ -0.57
CDC42SE1-201ENST00000357235 DEKP35659 375 aaKnown RBP11.5□□□□□ -0.57
CDC42SE1-201ENST00000357235 BIVM-ERCC5R4GMW8 1640 aa11.5□□□□□ -0.57
CDC42SE1-201ENST00000357235 CARMIL1Q5VZK9 1371 aa11.49□□□□□ -0.57
CDC42SE1-201ENST00000357235 IGF1RP08069 1367 aa11.49□□□□□ -0.57
CDC42SE1-201ENST00000357235 TONSLQ96HA7 1378 aa11.48□□□□□ -0.57
CDC42SE1-201ENST00000357235 HNRNPUQ00839 825 aaKnown RBP eCLIP11.48□□□□□ -0.57
CDC42SE1-201ENST00000357235 NESP48681 1621 aa11.48□□□□□ -0.57
CDC42SE1-201ENST00000357235 SALL2Q9Y467 1007 aaPredicted RBP11.47□□□□□ -0.57
CDC42SE1-201ENST00000357235 UBE2Q2Q8WVN8 375 aa11.47□□□□□ -0.57
CDC42SE1-201ENST00000357235 LRRC9Q6ZRR7 1453 aa11.46□□□□□ -0.58
CDC42SE1-201ENST00000357235 ERICH6BQ5W0A0 696 aa11.45□□□□□ -0.58
CDC42SE1-201ENST00000357235 CNGB1Q14028 1251 aaPredicted RBP11.44□□□□□ -0.58
CDC42SE1-201ENST00000357235 TIAM1Q13009 1591 aa11.44□□□□□ -0.58
CDC42SE1-201ENST00000357235 CCER2I3L3R5 266 aa11.44□□□□□ -0.58
CDC42SE1-201ENST00000357235 CADPSQ9ULU8 1353 aa11.43□□□□□ -0.58
CDC42SE1-201ENST00000357235 FHOD3Q2V2M9 1422 aa11.43□□□□□ -0.58
CDC42SE1-201ENST00000357235 ERCC6Q03468 1493 aa11.42□□□□□ -0.58
CDC42SE1-201ENST00000357235 FANCIQ9NVI1 1328 aa11.42□□□□□ -0.58
CDC42SE1-201ENST00000357235 CCDC136Q96JN2 1154 aa11.42□□□□□ -0.58
CDC42SE1-201ENST00000357235 FHAD1B1AJZ9 1412 aa11.4□□□□□ -0.58
CDC42SE1-201ENST00000357235 CFTRP13569 1480 aa11.4□□□□□ -0.58
CDC42SE1-201ENST00000357235 CHIC2Q9UKJ5 165 aa11.4□□□□□ -0.58
CDC42SE1-201ENST00000357235 TIMELESSQ9UNS1 1208 aa11.4□□□□□ -0.58
CDC42SE1-201ENST00000357235 CDK11AQ9UQ88 783 aaPredicted RBP11.39□□□□□ -0.59
CDC42SE1-201ENST00000357235 RRP7BPQ9NSQ0 103 aa11.38□□□□□ -0.59
CDC42SE1-201ENST00000357235 MTUS2Q5JR59 1369 aa11.37□□□□□ -0.59
CDC42SE1-201ENST00000357235 ARID3CA6NKF2 412 aa11.37□□□□□ -0.59
CDC42SE1-201ENST00000357235 FAM9BQ8IZU0 186 aa11.37□□□□□ -0.59
CDC42SE1-201ENST00000357235 FGD5Q6ZNL6 1462 aa11.36□□□□□ -0.59
CDC42SE1-201ENST00000357235 PDS5BQ9NTI5 1447 aa11.36□□□□□ -0.59
CDC42SE1-201ENST00000357235 PCF11O94913 1555 aaKnown RBP11.33□□□□□ -0.59
CDC42SE1-201ENST00000357235 SENP3-EIF4A1A0A087X0R7 540 aa11.33□□□□□ -0.6
CDC42SE1-201ENST00000357235 LAMC3Q9Y6N6 1575 aa11.33□□□□□ -0.6
CDC42SE1-201ENST00000357235 HSPA5P11021 654 aaKnown RBP11.33□□□□□ -0.6
CDC42SE1-201ENST00000357235 POLR3GLQ9BT43 218 aa11.32□□□□□ -0.6
CDC42SE1-201ENST00000357235 CCDC18Q5T9S5 1454 aa11.32□□□□□ -0.6
CDC42SE1-201ENST00000357235 FOXD1Q16676 465 aa11.32□□□□□ -0.6
CDC42SE1-201ENST00000357235 CCDC184Q52MB2 194 aa11.31□□□□□ -0.6
CDC42SE1-201ENST00000357235 MAP3K1Q13233 1512 aa11.31□□□□□ -0.6
CDC42SE1-201ENST00000357235 B4GALNT3Q6L9W6 998 aa11.3□□□□□ -0.6
CDC42SE1-201ENST00000357235 RAD54L2Q9Y4B4 1467 aa11.3□□□□□ -0.6
CDC42SE1-201ENST00000357235 FGD6Q6ZV73 1430 aa11.3□□□□□ -0.6
CDC42SE1-201ENST00000357235 WASHC2AQ641Q2 1341 aa11.3□□□□□ -0.6
CDC42SE1-201ENST00000357235 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.29□□□□□ -0.6
CDC42SE1-201ENST00000357235 EIF5BO60841 1220 aaKnown RBP11.29□□□□□ -0.6
CDC42SE1-201ENST00000357235 EIF4G2P78344 907 aaKnown RBP eCLIP11.29□□□□□ -0.6
CDC42SE1-201ENST00000357235 MRS2Q9HD23 443 aa11.29□□□□□ -0.6
CDC42SE1-201ENST00000357235 PTPRKQ15262 1439 aa11.28□□□□□ -0.6
CDC42SE1-201ENST00000357235 FANCD2Q9BXW9 1451 aa11.28□□□□□ -0.6
CDC42SE1-201ENST00000357235 UACAQ9BZF9 1416 aa11.26□□□□□ -0.61
CDC42SE1-201ENST00000357235 NBR1Q14596 966 aa11.25□□□□□ -0.61
CDC42SE1-201ENST00000357235 CASKIN1Q8WXD9 1431 aa11.25□□□□□ -0.61
CDC42SE1-201ENST00000357235 AQRO60306 1485 aaKnown RBP eCLIP11.24□□□□□ -0.611e-6■■□□□ 12.2
CDC42SE1-201ENST00000357235 FYCO1Q9BQS8 1478 aa11.24□□□□□ -0.61
CDC42SE1-201ENST00000357235 PPP4R2Q9NY27 417 aa11.24□□□□□ -0.61
CDC42SE1-201ENST00000357235 ZNF326Q5BKZ1 582 aaKnown RBP11.24□□□□□ -0.61
CDC42SE1-201ENST00000357235 L3MBTL2Q969R5 705 aa11.24□□□□□ -0.61
CDC42SE1-201ENST00000357235 RTN4Q9NQC3 1192 aaKnown RBP11.24□□□□□ -0.61
CDC42SE1-201ENST00000357235 HFM1A2PYH4 1435 aa11.23□□□□□ -0.61
CDC42SE1-201ENST00000357235 FMN1Q68DA7 1419 aa11.23□□□□□ -0.61
CDC42SE1-201ENST00000357235 C11orf95C9JLR9 678 aaPredicted RBP11.23□□□□□ -0.61
CDC42SE1-201ENST00000357235 IL27Q8NEV9 243 aa11.23□□□□□ -0.61
CDC42SE1-201ENST00000357235 NAIPQ13075 1403 aa11.23□□□□□ -0.61
CDC42SE1-201ENST00000357235 TDRD9Q8NDG6 1382 aaKnown RBP11.22□□□□□ -0.61
CDC42SE1-201ENST00000357235 CFAP43Q8NDM7 1665 aa11.21□□□□□ -0.61
CDC42SE1-201ENST00000357235 PRKRIP1Q9H875 184 aaPredicted RBP11.21□□□□□ -0.62
CDC42SE1-201ENST00000357235 KIF21AQ7Z4S6 1674 aa11.21□□□□□ -0.62
CDC42SE1-201ENST00000357235 MPHOSPH9Q99550 1183 aa11.2□□□□□ -0.62
CDC42SE1-201ENST00000357235 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.2□□□□□ -0.62
CDC42SE1-201ENST00000357235 NCOA2Q15596 1464 aa11.2□□□□□ -0.62
CDC42SE1-201ENST00000357235 PKNOX2Q96KN3 472 aa11.2□□□□□ -0.62
CDC42SE1-201ENST00000357235 RTL5Q5HYW3 569 aaPredicted RBP11.19□□□□□ -0.62
CDC42SE1-201ENST00000357235 MYOM3Q5VTT5 1437 aa11.19□□□□□ -0.62
CDC42SE1-201ENST00000357235 MRC2Q9UBG0 1479 aa11.19□□□□□ -0.62
CDC42SE1-201ENST00000357235 PTPN23Q9H3S7 1636 aa11.18□□□□□ -0.62
CDC42SE1-201ENST00000357235 NOP58Q9Y2X3 529 aaKnown RBP11.18□□□□□ -0.62
CDC42SE1-201ENST00000357235 POLA1P09884 1462 aaPredicted RBP11.17□□□□□ -0.62
CDC42SE1-201ENST00000357235 SLC4A1APQ9BWU0 796 aaKnown RBP11.16□□□□□ -0.62
CDC42SE1-201ENST00000357235 EFCAB5A4FU69 1503 aa11.15□□□□□ -0.62
CDC42SE1-201ENST00000357235 NBPF8Q3BBV2 869 aa11.15□□□□□ -0.62
CDC42SE1-201ENST00000357235 CNTLNQ9NXG0 1405 aa11.15□□□□□ -0.62
CDC42SE1-201ENST00000357235 CCDC7Q96M83 1385 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms