RNA–Protein interactions for RNA: ENST00000357058.7

RNF38-204, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-204ENST00000357058 CFDP1Q9UEE9 299 aaPredicted RBP27.82■■■□□ 2.04
RNF38-204ENST00000357058 CCNB3Q8WWL7 1395 aa27.77■■■□□ 2.04
RNF38-204ENST00000357058 DAXXQ9UER7 740 aaPredicted RBP27.76■■■□□ 2.03
RNF38-204ENST00000357058 ESF1Q9H501 851 aaKnown RBP27.74■■■□□ 2.03
RNF38-204ENST00000357058 RUSC2Q8N2Y8 1516 aa27.73■■■□□ 2.03
RNF38-204ENST00000357058 KDM2AQ9Y2K7 1162 aa27.73■■■□□ 2.03
RNF38-204ENST00000357058 KANK4Q5T7N3 995 aaPredicted RBP27.71■■■□□ 2.03
RNF38-204ENST00000357058 HIRIP3Q9BW71 556 aaPredicted RBP27.71■■■□□ 2.03
RNF38-204ENST00000357058 RAPGEF2Q9Y4G8 1499 aa27.7■■■□□ 2.02
RNF38-204ENST00000357058 STAG3Q9UJ98 1225 aa27.65■■■□□ 2.02
RNF38-204ENST00000357058 FANCD2Q9BXW9 1451 aa27.64■■■□□ 2.02
RNF38-204ENST00000357058 MIER1Q8N108 512 aa27.63■■■□□ 2.01
RNF38-204ENST00000357058 NCAPD3P42695 1498 aa27.59■■■□□ 2.01
RNF38-204ENST00000357058 CLSPNQ9HAW4 1339 aa27.59■■■□□ 2.01
RNF38-204ENST00000357058 EIF4G2P78344 907 aaKnown RBP eCLIP27.58■■■□□ 2.01
RNF38-204ENST00000357058 SIN3AQ96ST3 1273 aa27.55■■■□□ 2
RNF38-204ENST00000357058 HNRNPUQ00839 825 aaKnown RBP eCLIP27.54■■■□□ 2
RNF38-204ENST00000357058 FAM9BQ8IZU0 186 aa27.54■■■□□ 2
RNF38-204ENST00000357058 ARHGAP35Q9NRY4 1499 aa27.54■■■□□ 2
RNF38-204ENST00000357058 FMN1Q68DA7 1419 aa27.53■■■□□ 2
RNF38-204ENST00000357058 PLPPR3Q6T4P5 718 aa27.47■■□□□ 1.99
RNF38-204ENST00000357058 FHOD3Q2V2M9 1422 aa27.46■■□□□ 1.99
RNF38-204ENST00000357058 CARMIL2Q6F5E8 1435 aa27.45■■□□□ 1.98
RNF38-204ENST00000357058 NEFMP07197 916 aa27.44■■□□□ 1.98
RNF38-204ENST00000357058 RGL3Q3MIN7 710 aa27.44■■□□□ 1.98
RNF38-204ENST00000357058 SETD5Q9C0A6 1442 aa27.42■■□□□ 1.98
RNF38-204ENST00000357058 CANXP27824 592 aaKnown RBP27.41■■□□□ 1.98
RNF38-204ENST00000357058 TMC1Q8TDI8 760 aa27.4■■□□□ 1.98
RNF38-204ENST00000357058 FGD5Q6ZNL6 1462 aa27.4■■□□□ 1.98
RNF38-204ENST00000357058 MRS2Q9HD23 443 aa27.39■■□□□ 1.97
RNF38-204ENST00000357058 FKBP8Q14318 412 aa27.37■■□□□ 1.97
RNF38-204ENST00000357058 MYT1Q01538 1121 aa27.34■■□□□ 1.97
RNF38-204ENST00000357058 IGF1RP08069 1367 aa27.31■■□□□ 1.96
RNF38-204ENST00000357058 SALL2Q9Y467 1007 aaPredicted RBP27.3■■□□□ 1.96
RNF38-204ENST00000357058 RAD54L2Q9Y4B4 1467 aa27.28■■□□□ 1.96
RNF38-204ENST00000357058 RAB3GAP2Q9H2M9 1393 aa27.27■■□□□ 1.96
RNF38-204ENST00000357058 CARD11Q9BXL7 1154 aa27.24■■□□□ 1.95
RNF38-204ENST00000357058 SLC24A1O60721 1099 aa27.23■■□□□ 1.95
RNF38-204ENST00000357058 CFTRP13569 1480 aa27.22■■□□□ 1.95
RNF38-204ENST00000357058 SENP3Q9H4L4 574 aaPredicted RBP27.22■■□□□ 1.95
RNF38-204ENST00000357058 TIMELESSQ9UNS1 1208 aa27.21■■□□□ 1.95
RNF38-204ENST00000357058 GAPVD1Q14C86 1478 aa27.19■■□□□ 1.94
RNF38-204ENST00000357058 SYNJ1O43426 1573 aa27.19■■□□□ 1.94
RNF38-204ENST00000357058 JPH4Q96JJ6 628 aa27.18■■□□□ 1.94
RNF38-204ENST00000357058 BICRAQ9NZM4 1560 aa27.17■■□□□ 1.94
RNF38-204ENST00000357058 WDR43Q15061 677 aaKnown RBP eCLIP27.17■■□□□ 1.94
RNF38-204ENST00000357058 HMGXB3Q12766 1538 aa27.16■■□□□ 1.94
RNF38-204ENST00000357058 ZBTB47Q9UFB7 747 aaPredicted RBP27.15■■□□□ 1.94
RNF38-204ENST00000357058 CC2D2AQ9P2K1 1620 aa27.11■■□□□ 1.93
RNF38-204ENST00000357058 FOXD1Q16676 465 aa27.1■■□□□ 1.93
RNF38-204ENST00000357058 PPP1R15AO75807 674 aaPredicted RBP27.1■■□□□ 1.93
RNF38-204ENST00000357058 RTL5Q5HYW3 569 aaPredicted RBP27.1■■□□□ 1.93
RNF38-204ENST00000357058 SCAF1Q9H7N4 1312 aaKnown RBP27.08■■□□□ 1.93
RNF38-204ENST00000357058 CCDC18Q5T9S5 1454 aa27.08■■□□□ 1.93
RNF38-204ENST00000357058 PKD2Q13563 968 aa27.07■■□□□ 1.92
RNF38-204ENST00000357058 DCAF11Q8TEB1 546 aa27.06■■□□□ 1.92
RNF38-204ENST00000357058 MPHOSPH9Q99550 1183 aa27.05■■□□□ 1.92
RNF38-204ENST00000357058 BCL11AQ9H165 835 aa27.05■■□□□ 1.92
RNF38-204ENST00000357058 NESP48681 1621 aa27.04■■□□□ 1.92
RNF38-204ENST00000357058 ARID4BQ4LE39 1312 aaPredicted RBP27.03■■□□□ 1.92
RNF38-204ENST00000357058 KIF21BO75037 1637 aa27.02■■□□□ 1.92
RNF38-204ENST00000357058 CDCA8Q53HL2 280 aa27.02■■□□□ 1.92
RNF38-204ENST00000357058 ANKRD30AQ9BXX3 1397 aa27.02■■□□□ 1.92
RNF38-204ENST00000357058 KANK1Q14678 1352 aa27■■□□□ 1.91
RNF38-204ENST00000357058 EFCAB2Q5VUJ9 269 aa27■■□□□ 1.91
RNF38-204ENST00000357058 AQRO60306 1485 aaKnown RBP eCLIP26.99■■□□□ 1.91
RNF38-204ENST00000357058 TOP2BQ02880 1626 aa26.97■■□□□ 1.91
RNF38-204ENST00000357058 HNRNPMP52272 730 aaKnown RBP eCLIP26.96■■□□□ 1.91
RNF38-204ENST00000357058 NUP155O75694 1391 aa26.96■■□□□ 1.91
RNF38-204ENST00000357058 KNSTRNQ9Y448 316 aa26.96■■□□□ 1.91
RNF38-204ENST00000357058 CUX1P39880 1505 aa26.95■■□□□ 1.9
RNF38-204ENST00000357058 IRX6P78412 446 aaPredicted RBP26.94■■□□□ 1.9
RNF38-204ENST00000357058 ERICH3Q5RHP9 1530 aa26.94■■□□□ 1.9
RNF38-204ENST00000357058 HSPA5P11021 654 aaKnown RBP26.93■■□□□ 1.9
RNF38-204ENST00000357058 CCDC136Q96JN2 1154 aa26.9■■□□□ 1.9
RNF38-204ENST00000357058 DHX57Q6P158 1386 aaKnown RBP26.9■■□□□ 1.9
RNF38-204ENST00000357058 PTPRGP23470 1445 aa26.88■■□□□ 1.89
RNF38-204ENST00000357058 SENP3-EIF4A1A0A087X0R7 540 aa26.88■■□□□ 1.89
RNF38-204ENST00000357058 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.88■■□□□ 1.89
RNF38-204ENST00000357058 ANP32AP39687 249 aaKnown RBP26.86■■□□□ 1.89
RNF38-204ENST00000357058 GGT6Q6P531 493 aa26.85■■□□□ 1.89
RNF38-204ENST00000357058 TOPBP1Q92547 1522 aa26.84■■□□□ 1.89
RNF38-204ENST00000357058 PRXQ9BXM0 1461 aa26.83■■□□□ 1.89
RNF38-204ENST00000357058 NPM2Q86SE8 214 aaKnown RBP26.83■■□□□ 1.89
RNF38-204ENST00000357058 RSPH4AQ5TD94 716 aa26.82■■□□□ 1.88
RNF38-204ENST00000357058 ARAP1Q96P48 1450 aa26.81■■□□□ 1.88
RNF38-204ENST00000357058 TMF1P82094 1093 aa26.8■■□□□ 1.88
RNF38-204ENST00000357058 GRIN2BQ13224 1484 aa26.8■■□□□ 1.88
RNF38-204ENST00000357058 POLA1P09884 1462 aaPredicted RBP26.79■■□□□ 1.88
RNF38-204ENST00000357058 UNC13AQ9UPW8 1703 aa26.78■■□□□ 1.88
RNF38-204ENST00000357058 L3MBTL2Q969R5 705 aa26.77■■□□□ 1.88
RNF38-204ENST00000357058 MRC2Q9UBG0 1479 aa26.77■■□□□ 1.88
RNF38-204ENST00000357058 POGKQ9P215 609 aa26.77■■□□□ 1.88
RNF38-204ENST00000357058 CC2D1BQ5T0F9 858 aaKnown RBP26.76■■□□□ 1.87
RNF38-204ENST00000357058 MLECQ14165 292 aa26.76■■□□□ 1.87
RNF38-204ENST00000357058 LRRC9Q6ZRR7 1453 aa26.75■■□□□ 1.87
RNF38-204ENST00000357058 CFAP53Q96M91 514 aa26.74■■□□□ 1.87
RNF38-204ENST00000357058 SPAG9O60271 1321 aaKnown RBP26.74■■□□□ 1.87
RNF38-204ENST00000357058 CASKIN1Q8WXD9 1431 aa26.73■■□□□ 1.87
RNF38-204ENST00000357058 PHLDB1Q86UU1 1377 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms