RNA–Protein interactions for RNA: ENST00000357048.8

CAPN10-205, Transcript of calpain 10, humanhuman

TSL 1 (best)

Gene CAPN10, Length 2,202 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN10-205ENST00000357048 SNAPC4Q5SXM2 1469 aa29.11■■■□□ 2.25
CAPN10-205ENST00000357048 OSCARQ8IYS5 282 aa29.1■■■□□ 2.25
CAPN10-205ENST00000357048 PBRM1Q86U86 1689 aa29.07■■■□□ 2.24
CAPN10-205ENST00000357048 GTF3C3Q9Y5Q9 886 aa29.07■■■□□ 2.24
CAPN10-205ENST00000357048 CHMP7Q8WUX9 453 aaPredicted RBP29.02■■■□□ 2.24
CAPN10-205ENST00000357048 MAGI1Q96QZ7 1491 aaPredicted RBP29.02■■■□□ 2.24
CAPN10-205ENST00000357048 CLIP1P30622 1438 aa29.02■■■□□ 2.24
CAPN10-205ENST00000357048 CHD1O14646 1710 aa29■■■□□ 2.23
CAPN10-205ENST00000357048 VPS8Q8N3P4 1428 aa28.98■■■□□ 2.23
CAPN10-205ENST00000357048 KIF27Q86VH2 1401 aa28.95■■■□□ 2.23
CAPN10-205ENST00000357048 SYNJ2O15056 1496 aa28.93■■■□□ 2.22
CAPN10-205ENST00000357048 ERICH3Q5RHP9 1530 aa28.91■■■□□ 2.22
CAPN10-205ENST00000357048 HNRNPUL2Q1KMD3 747 aaKnown RBP28.86■■■□□ 2.21
CAPN10-205ENST00000357048 RAPGEF2Q9Y4G8 1499 aa28.85■■■□□ 2.21
CAPN10-205ENST00000357048 IGF1RP08069 1367 aa28.84■■■□□ 2.21
CAPN10-205ENST00000357048 ADAMTS12P58397 1594 aa28.84■■■□□ 2.21
CAPN10-205ENST00000357048 FHAD1B1AJZ9 1412 aa28.83■■■□□ 2.21
CAPN10-205ENST00000357048 APLP2Q06481 763 aa28.78■■■□□ 2.2
CAPN10-205ENST00000357048 GRIN2AQ12879 1464 aa28.77■■■□□ 2.2
CAPN10-205ENST00000357048 MIER1Q8N108 512 aa28.7■■■□□ 2.19
CAPN10-205ENST00000357048 CARMIL1Q5VZK9 1371 aa28.68■■■□□ 2.18
CAPN10-205ENST00000357048 CUL7Q14999 1698 aa28.66■■■□□ 2.18
CAPN10-205ENST00000357048 CLASP1Q7Z460 1538 aa28.64■■■□□ 2.17
CAPN10-205ENST00000357048 CLSPNQ9HAW4 1339 aa28.63■■■□□ 2.17
CAPN10-205ENST00000357048 CEP170Q5SW79 1584 aa28.63■■■□□ 2.17
CAPN10-205ENST00000357048 YTHDC1Q96MU7 727 aaKnown RBP28.61■■■□□ 2.17
CAPN10-205ENST00000357048 NUP160Q12769 1436 aa28.61■■■□□ 2.17
CAPN10-205ENST00000357048 PRXQ9BXM0 1461 aa28.59■■■□□ 2.17
CAPN10-205ENST00000357048 ARHGEF11O15085 1522 aa28.57■■■□□ 2.16
CAPN10-205ENST00000357048 RIMBP3CA6NJZ7 1639 aa28.55■■■□□ 2.16
CAPN10-205ENST00000357048 RIMBP3BA6NNM3 1639 aa28.55■■■□□ 2.16
CAPN10-205ENST00000357048 RIMBP3Q9UFD9 1639 aa28.55■■■□□ 2.16
CAPN10-205ENST00000357048 ARAP1Q96P48 1450 aa28.53■■■□□ 2.16
CAPN10-205ENST00000357048 DHX57Q6P158 1386 aaKnown RBP28.48■■■□□ 2.15
CAPN10-205ENST00000357048 RANGAP1P46060 587 aaPredicted RBP28.47■■■□□ 2.15
CAPN10-205ENST00000357048 MYT1Q01538 1121 aa28.46■■■□□ 2.15
CAPN10-205ENST00000357048 CYB5RLQ6IPT4 315 aa28.44■■■□□ 2.14
CAPN10-205ENST00000357048 JPH4Q96JJ6 628 aa28.43■■■□□ 2.14
CAPN10-205ENST00000357048 RRBP1Q9P2E9 1410 aaKnown RBP28.4■■■□□ 2.14
CAPN10-205ENST00000357048 KIAA0586Q9BVV6 1533 aa28.39■■■□□ 2.14
CAPN10-205ENST00000357048 ERCC6L2Q5T890 1561 aa28.36■■■□□ 2.13
CAPN10-205ENST00000357048 KANK4Q5T7N3 995 aaPredicted RBP28.35■■■□□ 2.13
CAPN10-205ENST00000357048 SHROOM2Q13796 1616 aa28.34■■■□□ 2.13
CAPN10-205ENST00000357048 PRG4Q92954 1404 aaPredicted RBP28.34■■■□□ 2.13
CAPN10-205ENST00000357048 IQGAP2Q13576 1575 aa28.26■■■□□ 2.11
CAPN10-205ENST00000357048 ARHGAP35Q9NRY4 1499 aa28.21■■■□□ 2.11
CAPN10-205ENST00000357048 CCNB3Q8WWL7 1395 aa28.2■■■□□ 2.1
CAPN10-205ENST00000357048 CTTNBP2Q8WZ74 1663 aa28.17■■■□□ 2.1
CAPN10-205ENST00000357048 CARMIL2Q6F5E8 1435 aa28.11■■■□□ 2.09
CAPN10-205ENST00000357048 MAP3K1Q13233 1512 aa28.09■■■□□ 2.09
CAPN10-205ENST00000357048 UGGT2Q9NYU1 1516 aa28.07■■■□□ 2.08
CAPN10-205ENST00000357048 DISP1Q96F81 1524 aa28.07■■■□□ 2.08
CAPN10-205ENST00000357048 PTPRGP23470 1445 aa28.01■■■□□ 2.08
CAPN10-205ENST00000357048 TIAM1Q13009 1591 aa28.01■■■□□ 2.07
CAPN10-205ENST00000357048 P3H3Q8IVL6 736 aa27.99■■■□□ 2.07
CAPN10-205ENST00000357048 RAB3GAP2Q9H2M9 1393 aa27.98■■■□□ 2.07
CAPN10-205ENST00000357048 KIAA0556O60303 1618 aa27.97■■■□□ 2.07
CAPN10-205ENST00000357048 MAPKBP1O60336 1514 aa27.97■■■□□ 2.07
CAPN10-205ENST00000357048 SUPT16HQ9Y5B9 1047 aaKnown RBP27.96■■■□□ 2.07
CAPN10-205ENST00000357048 ITGAEP38570 1179 aa27.9■■■□□ 2.06
CAPN10-205ENST00000357048 LRRC9Q6ZRR7 1453 aa27.89■■■□□ 2.05
CAPN10-205ENST00000357048 SETD5Q9C0A6 1442 aa27.89■■■□□ 2.05
CAPN10-205ENST00000357048 ADCY10Q96PN6 1610 aa27.84■■■□□ 2.05
CAPN10-205ENST00000357048 TRHP20396 242 aaPredicted RBP27.84■■■□□ 2.05
CAPN10-205ENST00000357048 NPM1P06748 294 aaKnown RBP eCLIP27.84■■■□□ 2.05
CAPN10-205ENST00000357048 CFAP43Q8NDM7 1665 aa27.81■■■□□ 2.04
CAPN10-205ENST00000357048 SAMD9Q5K651 1589 aa27.81■■■□□ 2.04
CAPN10-205ENST00000357048 UACAQ9BZF9 1416 aa27.8■■■□□ 2.04
CAPN10-205ENST00000357048 PHLDB1Q86UU1 1377 aa27.78■■■□□ 2.04
CAPN10-205ENST00000357048 PLB1Q6P1J6 1458 aa27.77■■■□□ 2.04
CAPN10-205ENST00000357048 FHOD3Q2V2M9 1422 aa27.76■■■□□ 2.04
CAPN10-205ENST00000357048 TIMELESSQ9UNS1 1208 aa27.72■■■□□ 2.03
CAPN10-205ENST00000357048 ABCC2Q92887 1545 aa27.71■■■□□ 2.03
CAPN10-205ENST00000357048 PCF11O94913 1555 aaKnown RBP27.7■■■□□ 2.03
CAPN10-205ENST00000357048 EFCAB5A4FU69 1503 aa27.7■■■□□ 2.03
CAPN10-205ENST00000357048 UHRF1BP1LA0JNW5 1464 aa27.69■■■□□ 2.02
CAPN10-205ENST00000357048 ARID3CA6NKF2 412 aa27.68■■■□□ 2.02
CAPN10-205ENST00000357048 KCNH8Q96L42 1107 aa27.65■■■□□ 2.02
CAPN10-205ENST00000357048 ABCA8O94911 1581 aa27.65■■■□□ 2.02
CAPN10-205ENST00000357048 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.65■■■□□ 2.02
CAPN10-205ENST00000357048 FAM50AQ14320 339 aaKnown RBP27.64■■■□□ 2.02
CAPN10-205ENST00000357048 SIN3AQ96ST3 1273 aa27.62■■■□□ 2.01
CAPN10-205ENST00000357048 FYCO1Q9BQS8 1478 aa27.61■■■□□ 2.01
CAPN10-205ENST00000357048 KDM5BQ9UGL1 1544 aa27.6■■■□□ 2.01
CAPN10-205ENST00000357048 TSHZ2Q9NRE2 1034 aa27.59■■■□□ 2.01
CAPN10-205ENST00000357048 PPP1R15AO75807 674 aaPredicted RBP27.57■■■□□ 2
CAPN10-205ENST00000357048 ZCCHC11Q5TAX3 1644 aaKnown RBP27.57■■■□□ 2
CAPN10-205ENST00000357048 DDX10Q13206 875 aaKnown RBP27.56■■■□□ 2
CAPN10-205ENST00000357048 CASKIN1Q8WXD9 1431 aa27.56■■■□□ 2
CAPN10-205ENST00000357048 ASXL2Q76L83 1435 aa27.55■■■□□ 2
CAPN10-205ENST00000357048 RAPGEF6Q8TEU7 1601 aa27.55■■■□□ 2
CAPN10-205ENST00000357048 FAM69CQ0P6D2 419 aa27.55■■■□□ 2
CAPN10-205ENST00000357048 ATP1B4Q9UN42 357 aaPredicted RBP27.54■■■□□ 2
CAPN10-205ENST00000357048 FMN1Q68DA7 1419 aa27.5■■□□□ 1.99
CAPN10-205ENST00000357048 ABCC10Q5T3U5 1492 aa27.49■■□□□ 1.99
CAPN10-205ENST00000357048 ATP10BO94823 1461 aa27.49■■□□□ 1.99
CAPN10-205ENST00000357048 NUP153P49790 1475 aaKnown RBP27.48■■□□□ 1.99
CAPN10-205ENST00000357048 CCER2I3L3R5 266 aa27.47■■□□□ 1.99
CAPN10-205ENST00000357048 KIF13AQ9H1H9 1805 aa27.46■■□□□ 1.99
CAPN10-205ENST00000357048 DIP2BQ9P265 1576 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 850 ms