RNA–Protein interactions for RNA: ENST00000355666.5

TTC3-202, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TTC3, Length 7,712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-202ENST00000355666 GAPVD1Q14C86 1478 aa14.23□□□□□ -0.13
TTC3-202ENST00000355666 KANK4Q5T7N3 995 aaPredicted RBP14.23□□□□□ -0.13
TTC3-202ENST00000355666 POLA1P09884 1462 aaPredicted RBP14.22□□□□□ -0.13
TTC3-202ENST00000355666 PRDM2Q13029 1718 aa14.22□□□□□ -0.13
TTC3-202ENST00000355666 NEUROD1Q13562 356 aa14.22□□□□□ -0.13
TTC3-202ENST00000355666 CLSPNQ9HAW4 1339 aa14.2□□□□□ -0.14
TTC3-202ENST00000355666 YTHDC1Q96MU7 727 aaKnown RBP14.2□□□□□ -0.14
TTC3-202ENST00000355666 PELP1Q8IZL8 1130 aaKnown RBP14.2□□□□□ -0.14
TTC3-202ENST00000355666 ABCA10Q8WWZ4 1543 aa14.19□□□□□ -0.14
TTC3-202ENST00000355666 ARHGAP35Q9NRY4 1499 aa14.18□□□□□ -0.14
TTC3-202ENST00000355666 FHOD3Q2V2M9 1422 aa14.18□□□□□ -0.14
TTC3-202ENST00000355666 ARAP1Q96P48 1450 aa14.17□□□□□ -0.14
TTC3-202ENST00000355666 MRC2Q9UBG0 1479 aa14.16□□□□□ -0.14
TTC3-202ENST00000355666 CUL7Q14999 1698 aa14.13□□□□□ -0.15
TTC3-202ENST00000355666 EFCAB5A4FU69 1503 aa14.12□□□□□ -0.15
TTC3-202ENST00000355666 ACIN1Q9UKV3 1341 aaKnown RBP14.11□□□□□ -0.15
TTC3-202ENST00000355666 ZNF777Q9ULD5 760 aaPredicted RBP14.1□□□□□ -0.15
TTC3-202ENST00000355666 IFT140Q96RY7 1462 aa14.07□□□□□ -0.16
TTC3-202ENST00000355666 TONSLQ96HA7 1378 aa14.07□□□□□ -0.16
TTC3-202ENST00000355666 GRIN2BQ13224 1484 aa14.07□□□□□ -0.16
TTC3-202ENST00000355666 URB2Q14146 1524 aaKnown RBP14.07□□□□□ -0.16
TTC3-202ENST00000355666 SETD5Q9C0A6 1442 aa14.07□□□□□ -0.16
TTC3-202ENST00000355666 CARMIL2Q6F5E8 1435 aa14.06□□□□□ -0.16
TTC3-202ENST00000355666 CASKIN1Q8WXD9 1431 aa14.05□□□□□ -0.16
TTC3-202ENST00000355666 CHIC2Q9UKJ5 165 aa14.05□□□□□ -0.16
TTC3-202ENST00000355666 FYCO1Q9BQS8 1478 aa14.05□□□□□ -0.16
TTC3-202ENST00000355666 MYT1LQ9UL68 1186 aa14.05□□□□□ -0.16
TTC3-202ENST00000355666 AQRO60306 1485 aaKnown RBP eCLIP14.04□□□□□ -0.161e-7■■■■□ 25.7
TTC3-202ENST00000355666 PLEKHD1A6NEE1 506 aa14.03□□□□□ -0.16
TTC3-202ENST00000355666 LRRC9Q6ZRR7 1453 aa14.03□□□□□ -0.16
TTC3-202ENST00000355666 TIAM1Q13009 1591 aa14□□□□□ -0.17
TTC3-202ENST00000355666 RRBP1Q9P2E9 1410 aaKnown RBP14□□□□□ -0.17
TTC3-202ENST00000355666 RAB3GAP2Q9H2M9 1393 aa13.99□□□□□ -0.17
TTC3-202ENST00000355666 CCDC18Q5T9S5 1454 aa13.99□□□□□ -0.17
TTC3-202ENST00000355666 RRP7BPQ9NSQ0 103 aa13.98□□□□□ -0.17
TTC3-202ENST00000355666 CFDP1Q9UEE9 299 aaPredicted RBP13.97□□□□□ -0.17
TTC3-202ENST00000355666 MAP3K1Q13233 1512 aa13.97□□□□□ -0.17
TTC3-202ENST00000355666 DNAJC5BQ9UF47 199 aa13.97□□□□□ -0.17
TTC3-202ENST00000355666 TSPY4P0CV99 314 aa13.95□□□□□ -0.18
TTC3-202ENST00000355666 TSPY10P0CW01 314 aa13.95□□□□□ -0.18
TTC3-202ENST00000355666 TIMELESSQ9UNS1 1208 aa13.95□□□□□ -0.18
TTC3-202ENST00000355666 DHX57Q6P158 1386 aaKnown RBP13.94□□□□□ -0.18
TTC3-202ENST00000355666 ANP32CO43423 234 aa13.93□□□□□ -0.18
TTC3-202ENST00000355666 NEFLP07196 543 aa13.92□□□□□ -0.18
TTC3-202ENST00000355666 PHLDB1Q86UU1 1377 aa13.92□□□□□ -0.18
TTC3-202ENST00000355666 PCF11O94913 1555 aaKnown RBP13.91□□□□□ -0.18
TTC3-202ENST00000355666 KIF21AQ7Z4S6 1674 aa13.91□□□□□ -0.18
TTC3-202ENST00000355666 FGD6Q6ZV73 1430 aa13.9□□□□□ -0.18
TTC3-202ENST00000355666 JPH4Q96JJ6 628 aa13.89□□□□□ -0.19
TTC3-202ENST00000355666 IQGAP2Q13576 1575 aa13.89□□□□□ -0.19
TTC3-202ENST00000355666 CTTNBP2Q8WZ74 1663 aa13.89□□□□□ -0.19
TTC3-202ENST00000355666 MYOM3Q5VTT5 1437 aa13.89□□□□□ -0.19
TTC3-202ENST00000355666 SNAPC4Q5SXM2 1469 aa13.89□□□□□ -0.19
TTC3-202ENST00000355666 POLR3GLQ9BT43 218 aa13.89□□□□□ -0.19
TTC3-202ENST00000355666 HECW1Q76N89 1606 aa13.88□□□□□ -0.19
TTC3-202ENST00000355666 EHBP1L1Q8N3D4 1523 aa13.88□□□□□ -0.19
TTC3-202ENST00000355666 ZNF326Q5BKZ1 582 aaKnown RBP13.87□□□□□ -0.19
TTC3-202ENST00000355666 SLC4A1APQ9BWU0 796 aaKnown RBP13.87□□□□□ -0.19
TTC3-202ENST00000355666 NCOA2Q15596 1464 aa13.86□□□□□ -0.19
TTC3-202ENST00000355666 SIN3AQ96ST3 1273 aa13.85□□□□□ -0.19
TTC3-202ENST00000355666 KIAA0586Q9BVV6 1533 aa13.85□□□□□ -0.19
TTC3-202ENST00000355666 NPM1P06748 294 aaKnown RBP eCLIP13.85□□□□□ -0.19
TTC3-202ENST00000355666 MIER1Q8N108 512 aa13.83□□□□□ -0.2
TTC3-202ENST00000355666 MAGI1Q96QZ7 1491 aaPredicted RBP13.83□□□□□ -0.2
TTC3-202ENST00000355666 ABCA5Q8WWZ7 1642 aa13.82□□□□□ -0.2
TTC3-202ENST00000355666 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.82□□□□□ -0.23e-9■■■■□ 21.4
TTC3-202ENST00000355666 SUPT6HQ7KZ85 1726 aaKnown RBP13.82□□□□□ -0.2
TTC3-202ENST00000355666 DDX10Q13206 875 aaKnown RBP13.8□□□□□ -0.2
TTC3-202ENST00000355666 KCNH8Q96L42 1107 aa13.8□□□□□ -0.2
TTC3-202ENST00000355666 SYNJ2O15056 1496 aa13.79□□□□□ -0.2
TTC3-202ENST00000355666 GRIN2AQ12879 1464 aa13.79□□□□□ -0.2
TTC3-202ENST00000355666 THOC2Q8NI27 1593 aaKnown RBP13.79□□□□□ -0.2
TTC3-202ENST00000355666 GTF3C3Q9Y5Q9 886 aa13.79□□□□□ -0.2
TTC3-202ENST00000355666 ADAMTS12P58397 1594 aa13.78□□□□□ -0.2
TTC3-202ENST00000355666 WDR62O43379 1518 aa13.78□□□□□ -0.2
TTC3-202ENST00000355666 PTPRGP23470 1445 aa13.78□□□□□ -0.2
TTC3-202ENST00000355666 ZNF608Q9ULD9 1512 aaPredicted RBP13.77□□□□□ -0.2
TTC3-202ENST00000355666 CFAP43Q8NDM7 1665 aa13.76□□□□□ -0.21
TTC3-202ENST00000355666 ANKRD30AQ9BXX3 1397 aa13.76□□□□□ -0.21
TTC3-202ENST00000355666 EIF4G2P78344 907 aaKnown RBP eCLIP13.76□□□□□ -0.213e-6■■■□□ 15.8
TTC3-202ENST00000355666 WDR97A6NE52 1622 aa13.76□□□□□ -0.21
TTC3-202ENST00000355666 EPRSP07814 1512 aaKnown RBP13.76□□□□□ -0.21
TTC3-202ENST00000355666 PBRM1Q86U86 1689 aa13.76□□□□□ -0.21
TTC3-202ENST00000355666 MIA2Q96PC5 1412 aa13.75□□□□□ -0.21
TTC3-202ENST00000355666 MPHOSPH9Q99550 1183 aa13.73□□□□□ -0.21
TTC3-202ENST00000355666 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.73□□□□□ -0.214e-7■■□□□ 14.3
TTC3-202ENST00000355666 TARBP1Q13395 1621 aaKnown RBP13.72□□□□□ -0.21
TTC3-202ENST00000355666 UACAQ9BZF9 1416 aa13.72□□□□□ -0.21
TTC3-202ENST00000355666 RSPH4AQ5TD94 716 aa13.71□□□□□ -0.22
TTC3-202ENST00000355666 PPP1R15AO75807 674 aaPredicted RBP13.7□□□□□ -0.22
TTC3-202ENST00000355666 HFM1A2PYH4 1435 aa13.69□□□□□ -0.22
TTC3-202ENST00000355666 CDK13Q14004 1512 aaKnown RBP13.68□□□□□ -0.22
TTC3-202ENST00000355666 PRG4Q92954 1404 aaPredicted RBP13.68□□□□□ -0.22
TTC3-202ENST00000355666 HIRIP3Q9BW71 556 aaPredicted RBP13.68□□□□□ -0.22
TTC3-202ENST00000355666 UGGT2Q9NYU1 1516 aa13.68□□□□□ -0.22
TTC3-202ENST00000355666 TROQ12816 1431 aaPredicted RBP13.68□□□□□ -0.22
TTC3-202ENST00000355666 CNGB1Q14028 1251 aaPredicted RBP13.67□□□□□ -0.22
TTC3-202ENST00000355666 SAMD9Q5K651 1589 aa13.67□□□□□ -0.22
TTC3-202ENST00000355666 EIF4G3O43432 1585 aaKnown RBP13.67□□□□□ -0.22
TTC3-202ENST00000355666 PTPN23Q9H3S7 1636 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms