RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 CTTNBP2Q8WZ74 1663 aa32.36■■■□□ 2.77
LIMS2-202ENST00000355119 ABCA5Q8WWZ7 1642 aa32.33■■■□□ 2.77
LIMS2-202ENST00000355119 CFAP43Q8NDM7 1665 aa32.32■■■□□ 2.76
LIMS2-202ENST00000355119 LRRC9Q6ZRR7 1453 aa32.31■■■□□ 2.76
LIMS2-202ENST00000355119 PCF11O94913 1555 aaKnown RBP32.29■■■□□ 2.76
LIMS2-202ENST00000355119 DHX57Q6P158 1386 aaKnown RBP32.29■■■□□ 2.76
LIMS2-202ENST00000355119 KIF21AQ7Z4S6 1674 aa32.26■■■□□ 2.76
LIMS2-202ENST00000355119 AQRO60306 1485 aaKnown RBP eCLIP32.24■■■□□ 2.75
LIMS2-202ENST00000355119 FYCO1Q9BQS8 1478 aa32.24■■■□□ 2.75
LIMS2-202ENST00000355119 GAPVD1Q14C86 1478 aa32.23■■■□□ 2.75
LIMS2-202ENST00000355119 FHOD3Q2V2M9 1422 aa32.22■■■□□ 2.75
LIMS2-202ENST00000355119 CASKIN1Q8WXD9 1431 aa32.19■■■□□ 2.74
LIMS2-202ENST00000355119 TDRD9Q8NDG6 1382 aaKnown RBP32.19■■■□□ 2.74
LIMS2-202ENST00000355119 P3H3Q8IVL6 736 aa32.19■■■□□ 2.74
LIMS2-202ENST00000355119 DNAJC5BQ9UF47 199 aa32.17■■■□□ 2.74
LIMS2-202ENST00000355119 TARBP1Q13395 1621 aaKnown RBP32.12■■■□□ 2.73
LIMS2-202ENST00000355119 FMN1Q68DA7 1419 aa32.12■■■□□ 2.73
LIMS2-202ENST00000355119 PHLDB1Q86UU1 1377 aa32.09■■■□□ 2.73
LIMS2-202ENST00000355119 SAMD9Q5K651 1589 aa32.08■■■□□ 2.73
LIMS2-202ENST00000355119 ATP1B4Q9UN42 357 aaPredicted RBP32.04■■■□□ 2.72
LIMS2-202ENST00000355119 ITGAEP38570 1179 aa32.03■■■□□ 2.72
LIMS2-202ENST00000355119 SNAPC4Q5SXM2 1469 aa32■■■□□ 2.71
LIMS2-202ENST00000355119 RAB3GAP2Q9H2M9 1393 aa31.98■■■□□ 2.71
LIMS2-202ENST00000355119 MRC2Q9UBG0 1479 aa31.98■■■□□ 2.71
LIMS2-202ENST00000355119 SETD5Q9C0A6 1442 aa31.96■■■□□ 2.71
LIMS2-202ENST00000355119 PBRM1Q86U86 1689 aa31.96■■■□□ 2.71
LIMS2-202ENST00000355119 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.95■■■□□ 2.7
LIMS2-202ENST00000355119 SCAF1Q9H7N4 1312 aaKnown RBP31.92■■■□□ 2.7
LIMS2-202ENST00000355119 THOC2Q8NI27 1593 aaKnown RBP31.91■■■□□ 2.7
LIMS2-202ENST00000355119 ACIN1Q9UKV3 1341 aaKnown RBP31.91■■■□□ 2.7
LIMS2-202ENST00000355119 CENPBP07199 599 aaPredicted RBP31.9■■■□□ 2.7
LIMS2-202ENST00000355119 FAM50AQ14320 339 aaKnown RBP31.9■■■□□ 2.7
LIMS2-202ENST00000355119 GRIN2BQ13224 1484 aa31.87■■■□□ 2.69
LIMS2-202ENST00000355119 ADAMTS12P58397 1594 aa31.85■■■□□ 2.69
LIMS2-202ENST00000355119 MAPKBP1O60336 1514 aa31.81■■■□□ 2.68
LIMS2-202ENST00000355119 MTUS2Q5JR59 1369 aa31.8■■■□□ 2.68
LIMS2-202ENST00000355119 LRRIQ1Q96JM4 1722 aa31.79■■■□□ 2.68
LIMS2-202ENST00000355119 FGD6Q6ZV73 1430 aa31.78■■■□□ 2.68
LIMS2-202ENST00000355119 NEUROD1Q13562 356 aa31.78■■■□□ 2.68
LIMS2-202ENST00000355119 IFT140Q96RY7 1462 aa31.76■■■□□ 2.68
LIMS2-202ENST00000355119 IQGAP2Q13576 1575 aa31.75■■■□□ 2.67
LIMS2-202ENST00000355119 WDR62O43379 1518 aa31.74■■■□□ 2.67
LIMS2-202ENST00000355119 EHBP1L1Q8N3D4 1523 aa31.73■■■□□ 2.67
LIMS2-202ENST00000355119 MIER1Q8N108 512 aa31.73■■■□□ 2.67
LIMS2-202ENST00000355119 CCDC18Q5T9S5 1454 aa31.71■■■□□ 2.67
LIMS2-202ENST00000355119 SUPT6HQ7KZ85 1726 aaKnown RBP31.7■■■□□ 2.67
LIMS2-202ENST00000355119 NCOA2Q15596 1464 aa31.68■■■□□ 2.66
LIMS2-202ENST00000355119 HECW1Q76N89 1606 aa31.66■■■□□ 2.66
LIMS2-202ENST00000355119 MYOM3Q5VTT5 1437 aa31.64■■■□□ 2.66
LIMS2-202ENST00000355119 UGGT2Q9NYU1 1516 aa31.61■■■□□ 2.65
LIMS2-202ENST00000355119 ARHGEF11O15085 1522 aa31.59■■■□□ 2.65
LIMS2-202ENST00000355119 ZNF608Q9ULD9 1512 aaPredicted RBP31.59■■■□□ 2.65
LIMS2-202ENST00000355119 MAGI3Q5TCQ9 1506 aa31.53■■■□□ 2.64
LIMS2-202ENST00000355119 TIMELESSQ9UNS1 1208 aa31.53■■■□□ 2.64
LIMS2-202ENST00000355119 HFM1A2PYH4 1435 aa31.53■■■□□ 2.64
LIMS2-202ENST00000355119 PTPN23Q9H3S7 1636 aa31.51■■■□□ 2.64
LIMS2-202ENST00000355119 EPRSP07814 1512 aaKnown RBP31.51■■■□□ 2.63
LIMS2-202ENST00000355119 KIAA0586Q9BVV6 1533 aa31.5■■■□□ 2.63
LIMS2-202ENST00000355119 PTPRKQ15262 1439 aa31.49■■■□□ 2.63
LIMS2-202ENST00000355119 EIF4G3O43432 1585 aaKnown RBP31.47■■■□□ 2.63
LIMS2-202ENST00000355119 TCOF1Q13428 1488 aaKnown RBP31.45■■■□□ 2.63
LIMS2-202ENST00000355119 YTHDC1Q96MU7 727 aaKnown RBP31.44■■■□□ 2.62
LIMS2-202ENST00000355119 ERCC6Q03468 1493 aa31.44■■■□□ 2.62
LIMS2-202ENST00000355119 SIN3AQ96ST3 1273 aa31.43■■■□□ 2.62
LIMS2-202ENST00000355119 GRIN2AQ12879 1464 aa31.43■■■□□ 2.62
LIMS2-202ENST00000355119 KIAA0556O60303 1618 aa31.42■■■□□ 2.62
LIMS2-202ENST00000355119 GTF3C3Q9Y5Q9 886 aa31.42■■■□□ 2.62
LIMS2-202ENST00000355119 UACAQ9BZF9 1416 aa31.41■■■□□ 2.62
LIMS2-202ENST00000355119 NAIPQ13075 1403 aa31.4■■■□□ 2.62
LIMS2-202ENST00000355119 CDK13Q14004 1512 aaKnown RBP31.38■■■□□ 2.61
LIMS2-202ENST00000355119 DISP1Q96F81 1524 aa31.37■■■□□ 2.61
LIMS2-202ENST00000355119 MAGI1Q96QZ7 1491 aaPredicted RBP31.37■■■□□ 2.61
LIMS2-202ENST00000355119 MIA2Q96PC5 1412 aa31.36■■■□□ 2.61
LIMS2-202ENST00000355119 AKNAQ7Z591 1439 aa31.29■■■□□ 2.6
LIMS2-202ENST00000355119 GCC2Q8IWJ2 1684 aa31.29■■■□□ 2.6
LIMS2-202ENST00000355119 RAPGEF6Q8TEU7 1601 aa31.27■■■□□ 2.6
LIMS2-202ENST00000355119 SYNJ2O15056 1496 aa31.26■■■□□ 2.6
LIMS2-202ENST00000355119 PPP1R15AO75807 674 aaPredicted RBP31.25■■■□□ 2.59
LIMS2-202ENST00000355119 NUP153P49790 1475 aaKnown RBP31.22■■■□□ 2.59
LIMS2-202ENST00000355119 TONSLQ96HA7 1378 aa31.2■■■□□ 2.59
LIMS2-202ENST00000355119 CEP170Q5SW79 1584 aa31.19■■■□□ 2.58
LIMS2-202ENST00000355119 CHMP7Q8WUX9 453 aaPredicted RBP31.18■■■□□ 2.58
LIMS2-202ENST00000355119 ARID3CA6NKF2 412 aa31.15■■■□□ 2.58
LIMS2-202ENST00000355119 CDK11AQ9UQ88 783 aaPredicted RBP31.15■■■□□ 2.58
LIMS2-202ENST00000355119 RRP7BPQ9NSQ0 103 aa31.14■■■□□ 2.57
LIMS2-202ENST00000355119 CHIC2Q9UKJ5 165 aa31.11■■■□□ 2.57
LIMS2-202ENST00000355119 NUP160Q12769 1436 aa31.11■■■□□ 2.57
LIMS2-202ENST00000355119 CARMIL2Q6F5E8 1435 aa31.07■■■□□ 2.57
LIMS2-202ENST00000355119 ROCK1Q13464 1354 aa31.07■■■□□ 2.56
LIMS2-202ENST00000355119 DNMT1P26358 1616 aaKnown RBP31.06■■■□□ 2.56
LIMS2-202ENST00000355119 DAPK1P53355 1430 aa31.05■■■□□ 2.56
LIMS2-202ENST00000355119 PELP1Q8IZL8 1130 aaKnown RBP31.05■■■□□ 2.56
LIMS2-202ENST00000355119 TROQ12816 1431 aaPredicted RBP31.05■■■□□ 2.56
LIMS2-202ENST00000355119 KDM6BO15054 1643 aa31.03■■■□□ 2.56
LIMS2-202ENST00000355119 FBLN2P98095 1184 aa31■■■□□ 2.55
LIMS2-202ENST00000355119 TRIM52Q96A61 297 aa30.99■■■□□ 2.55
LIMS2-202ENST00000355119 ABCC5O15440 1437 aa30.99■■■□□ 2.55
LIMS2-202ENST00000355119 PLB1Q6P1J6 1458 aa30.98■■■□□ 2.55
LIMS2-202ENST00000355119 ADCY10Q96PN6 1610 aa30.98■■■□□ 2.55
LIMS2-202ENST00000355119 DENND4BO75064 1496 aaPredicted RBP30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms