RNA–Protein interactions for RNA: ENST00000354192.7

APP-203, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-203ENST00000354192 TOPBP1Q92547 1522 aa26.51■■□□□ 1.83
APP-203ENST00000354192 DHX57Q6P158 1386 aaKnown RBP26.51■■□□□ 1.83
APP-203ENST00000354192 SIN3AQ96ST3 1273 aa26.46■■□□□ 1.83
APP-203ENST00000354192 HIRIP3Q9BW71 556 aaPredicted RBP26.43■■□□□ 1.82
APP-203ENST00000354192 FBLN2P98095 1184 aa26.43■■□□□ 1.82
APP-203ENST00000354192 PHLDB1Q86UU1 1377 aa26.43■■□□□ 1.82
APP-203ENST00000354192 RAB3GAP2Q9H2M9 1393 aa26.39■■□□□ 1.82
APP-203ENST00000354192 CHIC2Q9UKJ5 165 aa26.37■■□□□ 1.81
APP-203ENST00000354192 URB2Q14146 1524 aaKnown RBP26.36■■□□□ 1.81
APP-203ENST00000354192 MTUS2Q5JR59 1369 aa26.35■■□□□ 1.81
APP-203ENST00000354192 PDS5BQ9NTI5 1447 aa26.34■■□□□ 1.81
APP-203ENST00000354192 DNMBPQ6XZF7 1577 aa26.34■■□□□ 1.81
APP-203ENST00000354192 FHAD1B1AJZ9 1412 aa26.32■■□□□ 1.8
APP-203ENST00000354192 RRBP1Q9P2E9 1410 aaKnown RBP26.32■■□□□ 1.8
APP-203ENST00000354192 ABCA10Q8WWZ4 1543 aa26.28■■□□□ 1.8
APP-203ENST00000354192 LRRC9Q6ZRR7 1453 aa26.28■■□□□ 1.8
APP-203ENST00000354192 AQRO60306 1485 aaKnown RBP eCLIP26.27■■□□□ 1.8
APP-203ENST00000354192 GAPVD1Q14C86 1478 aa26.27■■□□□ 1.8
APP-203ENST00000354192 PRDM2Q13029 1718 aa26.26■■□□□ 1.79
APP-203ENST00000354192 RRP7BPQ9NSQ0 103 aa26.23■■□□□ 1.79
APP-203ENST00000354192 TIAM1Q13009 1591 aa26.22■■□□□ 1.79
APP-203ENST00000354192 PCF11O94913 1555 aaKnown RBP26.2■■□□□ 1.78
APP-203ENST00000354192 SETD5Q9C0A6 1442 aa26.18■■□□□ 1.78
APP-203ENST00000354192 TRIM52Q96A61 297 aa26.18■■□□□ 1.78
APP-203ENST00000354192 DDX10Q13206 875 aaKnown RBP26.14■■□□□ 1.78
APP-203ENST00000354192 CLSPNQ9HAW4 1339 aa26.12■■□□□ 1.77
APP-203ENST00000354192 LAMC3Q9Y6N6 1575 aa26.1■■□□□ 1.77
APP-203ENST00000354192 FMN1Q68DA7 1419 aa26.08■■□□□ 1.77
APP-203ENST00000354192 KCNH8Q96L42 1107 aa26.04■■□□□ 1.76
APP-203ENST00000354192 CASKIN1Q8WXD9 1431 aa26.04■■□□□ 1.76
APP-203ENST00000354192 ZNF777Q9ULD5 760 aaPredicted RBP26.03■■□□□ 1.76
APP-203ENST00000354192 KIF21AQ7Z4S6 1674 aa26.02■■□□□ 1.76
APP-203ENST00000354192 CHMP7Q8WUX9 453 aaPredicted RBP26.02■■□□□ 1.76
APP-203ENST00000354192 FOXD1Q16676 465 aa25.99■■□□□ 1.75
APP-203ENST00000354192 ERCC6Q03468 1493 aa25.98■■□□□ 1.75
APP-203ENST00000354192 FYCO1Q9BQS8 1478 aa25.96■■□□□ 1.75
APP-203ENST00000354192 ZNF608Q9ULD9 1512 aaPredicted RBP25.96■■□□□ 1.75
APP-203ENST00000354192 FGD6Q6ZV73 1430 aa25.94■■□□□ 1.74
APP-203ENST00000354192 CNGB1Q14028 1251 aaPredicted RBP25.94■■□□□ 1.74
APP-203ENST00000354192 TONSLQ96HA7 1378 aa25.92■■□□□ 1.74
APP-203ENST00000354192 CUL7Q14999 1698 aa25.91■■□□□ 1.74
APP-203ENST00000354192 EFCAB5A4FU69 1503 aa25.88■■□□□ 1.73
APP-203ENST00000354192 NCOA2Q15596 1464 aa25.87■■□□□ 1.73
APP-203ENST00000354192 ZNF644Q9H582 1327 aaPredicted RBP25.87■■□□□ 1.73
APP-203ENST00000354192 PTPRKQ15262 1439 aa25.86■■□□□ 1.73
APP-203ENST00000354192 MAPKBP1O60336 1514 aa25.86■■□□□ 1.73
APP-203ENST00000354192 MAP3K1Q13233 1512 aa25.84■■□□□ 1.73
APP-203ENST00000354192 CTTNBP2Q8WZ74 1663 aa25.82■■□□□ 1.72
APP-203ENST00000354192 SNAPC4Q5SXM2 1469 aa25.82■■□□□ 1.72
APP-203ENST00000354192 MRC2Q9UBG0 1479 aa25.81■■□□□ 1.72
APP-203ENST00000354192 CDK13Q14004 1512 aaKnown RBP25.81■■□□□ 1.72
APP-203ENST00000354192 PPP1R15AO75807 674 aaPredicted RBP25.81■■□□□ 1.72
APP-203ENST00000354192 ABCA5Q8WWZ7 1642 aa25.8■■□□□ 1.72
APP-203ENST00000354192 WDR97A6NE52 1622 aa25.78■■□□□ 1.72
APP-203ENST00000354192 CCDC18Q5T9S5 1454 aa25.78■■□□□ 1.72
APP-203ENST00000354192 MYOM3Q5VTT5 1437 aa25.77■■□□□ 1.72
APP-203ENST00000354192 ZNF326Q5BKZ1 582 aaKnown RBP25.77■■□□□ 1.72
APP-203ENST00000354192 GRIN2BQ13224 1484 aa25.75■■□□□ 1.71
APP-203ENST00000354192 POLR3GLQ9BT43 218 aa25.75■■□□□ 1.71
APP-203ENST00000354192 CFAP43Q8NDM7 1665 aa25.74■■□□□ 1.71
APP-203ENST00000354192 BCANQ96GW7 911 aa25.72■■□□□ 1.71
APP-203ENST00000354192 CDK11AQ9UQ88 783 aaPredicted RBP25.7■■□□□ 1.71
APP-203ENST00000354192 TARBP1Q13395 1621 aaKnown RBP25.7■■□□□ 1.71
APP-203ENST00000354192 CFDP1Q9UEE9 299 aaPredicted RBP25.68■■□□□ 1.7
APP-203ENST00000354192 JPH4Q96JJ6 628 aa25.66■■□□□ 1.7
APP-203ENST00000354192 ANP32CO43423 234 aa25.65■■□□□ 1.7
APP-203ENST00000354192 IQGAP2Q13576 1575 aa25.65■■□□□ 1.7
APP-203ENST00000354192 MAGI3Q5TCQ9 1506 aa25.65■■□□□ 1.7
APP-203ENST00000354192 SLC4A1APQ9BWU0 796 aaKnown RBP25.64■■□□□ 1.7
APP-203ENST00000354192 NAIPQ13075 1403 aa25.64■■□□□ 1.7
APP-203ENST00000354192 MPHOSPH9Q99550 1183 aa25.63■■□□□ 1.69
APP-203ENST00000354192 EPRSP07814 1512 aaKnown RBP25.63■■□□□ 1.69
APP-203ENST00000354192 SAMD9Q5K651 1589 aa25.59■■□□□ 1.69
APP-203ENST00000354192 IFT140Q96RY7 1462 aa25.59■■□□□ 1.69
APP-203ENST00000354192 HFM1A2PYH4 1435 aa25.59■■□□□ 1.69
APP-203ENST00000354192 UACAQ9BZF9 1416 aa25.56■■□□□ 1.68
APP-203ENST00000354192 THOC2Q8NI27 1593 aaKnown RBP25.56■■□□□ 1.68
APP-203ENST00000354192 PRG4Q92954 1404 aaPredicted RBP25.55■■□□□ 1.68
APP-203ENST00000354192 PBRM1Q86U86 1689 aa25.55■■□□□ 1.68
APP-203ENST00000354192 L3MBTL2Q969R5 705 aa25.55■■□□□ 1.68
APP-203ENST00000354192 SUPT6HQ7KZ85 1726 aaKnown RBP25.54■■□□□ 1.68
APP-203ENST00000354192 EHBP1L1Q8N3D4 1523 aa25.54■■□□□ 1.68
APP-203ENST00000354192 LRRIQ1Q96JM4 1722 aa25.54■■□□□ 1.68
APP-203ENST00000354192 ADAMTS12P58397 1594 aa25.53■■□□□ 1.68
APP-203ENST00000354192 PLEKHD1A6NEE1 506 aa25.52■■□□□ 1.68
APP-203ENST00000354192 PTPN23Q9H3S7 1636 aa25.52■■□□□ 1.68
APP-203ENST00000354192 PLB1Q6P1J6 1458 aa25.51■■□□□ 1.67
APP-203ENST00000354192 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.51■■□□□ 1.67
APP-203ENST00000354192 HSPA5P11021 654 aaKnown RBP25.5■■□□□ 1.67
APP-203ENST00000354192 TIMELESSQ9UNS1 1208 aa25.49■■□□□ 1.67
APP-203ENST00000354192 SENP3-EIF4A1A0A087X0R7 540 aa25.48■■□□□ 1.67
APP-203ENST00000354192 GRIN2AQ12879 1464 aa25.48■■□□□ 1.67
APP-203ENST00000354192 KIAA0586Q9BVV6 1533 aa25.47■■□□□ 1.67
APP-203ENST00000354192 HECW1Q76N89 1606 aa25.46■■□□□ 1.67
APP-203ENST00000354192 UGGT2Q9NYU1 1516 aa25.46■■□□□ 1.67
APP-203ENST00000354192 KDM2AQ9Y2K7 1162 aa25.43■■□□□ 1.66
APP-203ENST00000354192 SUPT16HQ9Y5B9 1047 aaKnown RBP25.42■■□□□ 1.66
APP-203ENST00000354192 HNRNPMP52272 730 aaKnown RBP eCLIP25.42■■□□□ 1.661e-6■□□□□ 11.1
APP-203ENST00000354192 EIF4G2P78344 907 aaKnown RBP eCLIP25.42■■□□□ 1.66
APP-203ENST00000354192 DISP1Q96F81 1524 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms