RNA–Protein interactions for RNA: ENST00000352981.7

CASP6-202, Transcript of caspase 6, humanhuman

TSL 1 (best) BASIC

Gene CASP6, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6-202ENST00000352981 GRIN2AQ12879 1464 aa24.12■■□□□ 1.45
CASP6-202ENST00000352981 MSH5O43196 834 aa24.08■■□□□ 1.44
CASP6-202ENST00000352981 NUP160Q12769 1436 aa24.06■■□□□ 1.44
CASP6-202ENST00000352981 FAM9AQ8IZU1 332 aaPredicted RBP24.04■■□□□ 1.44
CASP6-202ENST00000352981 KIAA0586Q9BVV6 1533 aa23.97■■□□□ 1.43
CASP6-202ENST00000352981 KIF21BO75037 1637 aa23.96■■□□□ 1.43
CASP6-202ENST00000352981 CHD1O14646 1710 aa23.92■■□□□ 1.42
CASP6-202ENST00000352981 GOLGA3Q08378 1498 aa23.91■■□□□ 1.42
CASP6-202ENST00000352981 JPH4Q96JJ6 628 aa23.87■■□□□ 1.41
CASP6-202ENST00000352981 CLASP1Q7Z460 1538 aa23.87■■□□□ 1.41
CASP6-202ENST00000352981 CEP170Q5SW79 1584 aa23.86■■□□□ 1.41
CASP6-202ENST00000352981 UBTFP17480 764 aaKnown RBP23.82■■□□□ 1.4
CASP6-202ENST00000352981 TNIKQ9UKE5 1360 aa23.78■■□□□ 1.4
CASP6-202ENST00000352981 IQGAP2Q13576 1575 aa23.75■■□□□ 1.39
CASP6-202ENST00000352981 POTEDQ86YR6 584 aa23.73■■□□□ 1.39
CASP6-202ENST00000352981 CARMIL2Q6F5E8 1435 aa23.73■■□□□ 1.39
CASP6-202ENST00000352981 UGGT2Q9NYU1 1516 aa23.73■■□□□ 1.39
CASP6-202ENST00000352981 SHROOM2Q13796 1616 aa23.71■■□□□ 1.39
CASP6-202ENST00000352981 PRG4Q92954 1404 aaPredicted RBP23.69■■□□□ 1.38
CASP6-202ENST00000352981 CTTNBP2Q8WZ74 1663 aa23.64■■□□□ 1.37
CASP6-202ENST00000352981 ARHGEF11O15085 1522 aa23.6■■□□□ 1.37
CASP6-202ENST00000352981 LOC105371045A0A1W2PR82 267 aa23.59■■□□□ 1.37
CASP6-202ENST00000352981 DISP1Q96F81 1524 aa23.59■■□□□ 1.37
CASP6-202ENST00000352981 EFCAB5A4FU69 1503 aa23.58■■□□□ 1.37
CASP6-202ENST00000352981 PTPRGP23470 1445 aa23.53■■□□□ 1.36
CASP6-202ENST00000352981 EHMT2Q96KQ7 1210 aa23.53■■□□□ 1.36
CASP6-202ENST00000352981 SAMD9Q5K651 1589 aa23.49■■□□□ 1.35
CASP6-202ENST00000352981 CLIP1P30622 1438 aa23.49■■□□□ 1.35
CASP6-202ENST00000352981 KIAA0556O60303 1618 aa23.48■■□□□ 1.35
CASP6-202ENST00000352981 RIMBP3CA6NJZ7 1639 aa23.46■■□□□ 1.35
CASP6-202ENST00000352981 RIMBP3BA6NNM3 1639 aa23.46■■□□□ 1.35
CASP6-202ENST00000352981 RIMBP3Q9UFD9 1639 aa23.46■■□□□ 1.35
CASP6-202ENST00000352981 CEP162Q5TB80 1403 aa23.44■■□□□ 1.34
CASP6-202ENST00000352981 ARHGAP35Q9NRY4 1499 aa23.44■■□□□ 1.34
CASP6-202ENST00000352981 FMN1Q68DA7 1419 aa23.43■■□□□ 1.34
CASP6-202ENST00000352981 ERCC6L2Q5T890 1561 aa23.42■■□□□ 1.34
CASP6-202ENST00000352981 ARAP1Q96P48 1450 aa23.42■■□□□ 1.34
CASP6-202ENST00000352981 CYB5RLQ6IPT4 315 aa23.42■■□□□ 1.34
CASP6-202ENST00000352981 RANGAP1P46060 587 aaPredicted RBP23.38■■□□□ 1.33
CASP6-202ENST00000352981 UHRF1BP1LA0JNW5 1464 aa23.38■■□□□ 1.33
CASP6-202ENST00000352981 UACAQ9BZF9 1416 aa23.38■■□□□ 1.33
CASP6-202ENST00000352981 P3H3Q8IVL6 736 aa23.37■■□□□ 1.33
CASP6-202ENST00000352981 FHOD3Q2V2M9 1422 aa23.34■■□□□ 1.33
CASP6-202ENST00000352981 NPM1P06748 294 aaKnown RBP eCLIP23.3■■□□□ 1.32
CASP6-202ENST00000352981 PPP4R3CPQ6ZMV5 832 aa23.28■■□□□ 1.32
CASP6-202ENST00000352981 ABCC2Q92887 1545 aa23.26■■□□□ 1.31
CASP6-202ENST00000352981 ABCA8O94911 1581 aa23.25■■□□□ 1.31
CASP6-202ENST00000352981 CASKIN1Q8WXD9 1431 aa23.24■■□□□ 1.31
CASP6-202ENST00000352981 PLB1Q6P1J6 1458 aa23.23■■□□□ 1.31
CASP6-202ENST00000352981 KDM5BQ9UGL1 1544 aa23.21■■□□□ 1.31
CASP6-202ENST00000352981 TTBK1Q5TCY1 1321 aaPredicted RBP23.2■■□□□ 1.31
CASP6-202ENST00000352981 VPS8Q8N3P4 1428 aa23.19■■□□□ 1.3
CASP6-202ENST00000352981 FYCO1Q9BQS8 1478 aa23.17■■□□□ 1.3
CASP6-202ENST00000352981 CDK11AQ9UQ88 783 aaPredicted RBP23.16■■□□□ 1.3
CASP6-202ENST00000352981 RAPGEF6Q8TEU7 1601 aa23.15■■□□□ 1.3
CASP6-202ENST00000352981 NUP153P49790 1475 aaKnown RBP23.14■■□□□ 1.29
CASP6-202ENST00000352981 ADCY10Q96PN6 1610 aa23.13■■□□□ 1.29
CASP6-202ENST00000352981 ATP10BO94823 1461 aa23.12■■□□□ 1.29
CASP6-202ENST00000352981 CCDC18Q5T9S5 1454 aa23.11■■□□□ 1.29
CASP6-202ENST00000352981 HECW1Q76N89 1606 aa23.09■■□□□ 1.29
CASP6-202ENST00000352981 PLEKHD1A6NEE1 506 aa23.08■■□□□ 1.29
CASP6-202ENST00000352981 MAPKBP1O60336 1514 aa23.08■■□□□ 1.29
CASP6-202ENST00000352981 SCAF1Q9H7N4 1312 aaKnown RBP23.07■■□□□ 1.28
CASP6-202ENST00000352981 EPRSP07814 1512 aaKnown RBP23.07■■□□□ 1.28
CASP6-202ENST00000352981 MAP3K1Q13233 1512 aa23.06■■□□□ 1.28
CASP6-202ENST00000352981 ATP1B4Q9UN42 357 aaPredicted RBP23.05■■□□□ 1.28
CASP6-202ENST00000352981 TRHP20396 242 aaPredicted RBP23.03■■□□□ 1.28
CASP6-202ENST00000352981 APLP2Q06481 763 aa23.03■■□□□ 1.28
CASP6-202ENST00000352981 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.02■■□□□ 1.28
CASP6-202ENST00000352981 HNRNPUL2Q1KMD3 747 aaKnown RBP23.02■■□□□ 1.28
CASP6-202ENST00000352981 ASXL2Q76L83 1435 aa23■■□□□ 1.27
CASP6-202ENST00000352981 PCF11O94913 1555 aaKnown RBP22.99■■□□□ 1.27
CASP6-202ENST00000352981 WDR7Q9Y4E6 1490 aa22.97■■□□□ 1.27
CASP6-202ENST00000352981 ZCCHC11Q5TAX3 1644 aaKnown RBP22.96■■□□□ 1.27
CASP6-202ENST00000352981 TROQ12816 1431 aaPredicted RBP22.93■■□□□ 1.26
CASP6-202ENST00000352981 ABCC10Q5T3U5 1492 aa22.92■■□□□ 1.26
CASP6-202ENST00000352981 ARID3CA6NKF2 412 aa22.9■■□□□ 1.26
CASP6-202ENST00000352981 CDK13Q14004 1512 aaKnown RBP22.89■■□□□ 1.25
CASP6-202ENST00000352981 MTUS2Q5JR59 1369 aa22.88■■□□□ 1.25
CASP6-202ENST00000352981 GLI2P10070 1586 aa22.86■■□□□ 1.25
CASP6-202ENST00000352981 FAM69CQ0P6D2 419 aa22.84■■□□□ 1.25
CASP6-202ENST00000352981 TIAM1Q13009 1591 aa22.84■■□□□ 1.25
CASP6-202ENST00000352981 KCNH8Q96L42 1107 aa22.83■■□□□ 1.25
CASP6-202ENST00000352981 LRRC9Q6ZRR7 1453 aa22.82■■□□□ 1.24
CASP6-202ENST00000352981 MAPK8IP2Q13387 824 aaPredicted RBP22.81■■□□□ 1.24
CASP6-202ENST00000352981 EHBP1L1Q8N3D4 1523 aa22.79■■□□□ 1.24
CASP6-202ENST00000352981 KCNA4P22459 653 aa22.79■■□□□ 1.24
CASP6-202ENST00000352981 PHLDB1Q86UU1 1377 aa22.77■■□□□ 1.24
CASP6-202ENST00000352981 KANK4Q5T7N3 995 aaPredicted RBP22.76■■□□□ 1.23
CASP6-202ENST00000352981 DIP2BQ9P265 1576 aa22.75■■□□□ 1.23
CASP6-202ENST00000352981 CFAP43Q8NDM7 1665 aa22.75■■□□□ 1.23
CASP6-202ENST00000352981 CD109Q6YHK3 1445 aa22.75■■□□□ 1.23
CASP6-202ENST00000352981 LRRIQ1Q96JM4 1722 aa22.75■■□□□ 1.23
CASP6-202ENST00000352981 MAGI3Q5TCQ9 1506 aa22.73■■□□□ 1.23
CASP6-202ENST00000352981 ARAP3Q8WWN8 1544 aa22.72■■□□□ 1.23
CASP6-202ENST00000352981 NCBP3Q53F19 620 aaKnown RBP22.72■■□□□ 1.23
CASP6-202ENST00000352981 KIF14Q15058 1648 aa22.72■■□□□ 1.23
CASP6-202ENST00000352981 ABCA9Q8IUA7 1624 aa22.72■■□□□ 1.23
CASP6-202ENST00000352981 PLCH2O75038 1416 aa22.71■■□□□ 1.23
CASP6-202ENST00000352981 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms