RNA–Protein interactions for RNA: ENST00000351817.4

NKX2-4-201, Transcript of NK2 homeobox 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-4, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4-201ENST00000351817 WDR97A6NE52 1622 aa32.49■■■□□ 2.79
NKX2-4-201ENST00000351817 PELP1Q8IZL8 1130 aaKnown RBP32.46■■■□□ 2.79
NKX2-4-201ENST00000351817 MAP3K1Q13233 1512 aa32.43■■■□□ 2.78
NKX2-4-201ENST00000351817 CCNB3Q8WWL7 1395 aa32.42■■■□□ 2.78
NKX2-4-201ENST00000351817 TIAM1Q13009 1591 aa32.37■■■□□ 2.77
NKX2-4-201ENST00000351817 CUL7Q14999 1698 aa32.36■■■□□ 2.77
NKX2-4-201ENST00000351817 ABCA5Q8WWZ7 1642 aa32.34■■■□□ 2.77
NKX2-4-201ENST00000351817 GTF3C3Q9Y5Q9 886 aa32.33■■■□□ 2.77
NKX2-4-201ENST00000351817 MIER1Q8N108 512 aa32.31■■■□□ 2.76
NKX2-4-201ENST00000351817 TDRD9Q8NDG6 1382 aaKnown RBP32.29■■■□□ 2.76
NKX2-4-201ENST00000351817 TARBP1Q13395 1621 aaKnown RBP32.25■■■□□ 2.75
NKX2-4-201ENST00000351817 FHAD1B1AJZ9 1412 aa32.24■■■□□ 2.75
NKX2-4-201ENST00000351817 GAPVD1Q14C86 1478 aa32.24■■■□□ 2.75
NKX2-4-201ENST00000351817 LRRC9Q6ZRR7 1453 aa32.22■■■□□ 2.75
NKX2-4-201ENST00000351817 MRC2Q9UBG0 1479 aa32.19■■■□□ 2.74
NKX2-4-201ENST00000351817 CFAP43Q8NDM7 1665 aa32.18■■■□□ 2.74
NKX2-4-201ENST00000351817 CTTNBP2Q8WZ74 1663 aa32.16■■■□□ 2.74
NKX2-4-201ENST00000351817 YTHDC1Q96MU7 727 aaKnown RBP32.14■■■□□ 2.74
NKX2-4-201ENST00000351817 PCF11O94913 1555 aaKnown RBP32.13■■■□□ 2.73
NKX2-4-201ENST00000351817 ITGAEP38570 1179 aa32.11■■■□□ 2.73
NKX2-4-201ENST00000351817 EFCAB5A4FU69 1503 aa32.1■■■□□ 2.73
NKX2-4-201ENST00000351817 RAB3GAP2Q9H2M9 1393 aa32.08■■■□□ 2.73
NKX2-4-201ENST00000351817 PHLDB1Q86UU1 1377 aa32.06■■■□□ 2.72
NKX2-4-201ENST00000351817 FYCO1Q9BQS8 1478 aa32.02■■■□□ 2.72
NKX2-4-201ENST00000351817 P3H3Q8IVL6 736 aa32.02■■■□□ 2.72
NKX2-4-201ENST00000351817 SETD5Q9C0A6 1442 aa32.01■■■□□ 2.72
NKX2-4-201ENST00000351817 PBRM1Q86U86 1689 aa32■■■□□ 2.71
NKX2-4-201ENST00000351817 WDR62O43379 1518 aa32■■■□□ 2.71
NKX2-4-201ENST00000351817 AQRO60306 1485 aaKnown RBP eCLIP32■■■□□ 2.71
NKX2-4-201ENST00000351817 FHOD3Q2V2M9 1422 aa31.99■■■□□ 2.71
NKX2-4-201ENST00000351817 MAPKBP1O60336 1514 aa31.97■■■□□ 2.71
NKX2-4-201ENST00000351817 CASKIN1Q8WXD9 1431 aa31.97■■■□□ 2.71
NKX2-4-201ENST00000351817 FAM50AQ14320 339 aaKnown RBP31.9■■■□□ 2.7
NKX2-4-201ENST00000351817 IFT140Q96RY7 1462 aa31.89■■■□□ 2.7
NKX2-4-201ENST00000351817 ATP1B4Q9UN42 357 aaPredicted RBP31.89■■■□□ 2.7
NKX2-4-201ENST00000351817 SAMD9Q5K651 1589 aa31.88■■■□□ 2.69
NKX2-4-201ENST00000351817 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.86■■■□□ 2.69
NKX2-4-201ENST00000351817 FMN1Q68DA7 1419 aa31.86■■■□□ 2.69
NKX2-4-201ENST00000351817 ADAMTS12P58397 1594 aa31.86■■■□□ 2.69
NKX2-4-201ENST00000351817 ZNF608Q9ULD9 1512 aaPredicted RBP31.85■■■□□ 2.69
NKX2-4-201ENST00000351817 GRIN2BQ13224 1484 aa31.84■■■□□ 2.69
NKX2-4-201ENST00000351817 ERCC6Q03468 1493 aa31.82■■■□□ 2.68
NKX2-4-201ENST00000351817 THOC2Q8NI27 1593 aaKnown RBP31.78■■■□□ 2.68
NKX2-4-201ENST00000351817 SNAPC4Q5SXM2 1469 aa31.78■■■□□ 2.68
NKX2-4-201ENST00000351817 FGD6Q6ZV73 1430 aa31.69■■■□□ 2.66
NKX2-4-201ENST00000351817 EIF4G3O43432 1585 aaKnown RBP31.68■■■□□ 2.66
NKX2-4-201ENST00000351817 TIMELESSQ9UNS1 1208 aa31.67■■■□□ 2.66
NKX2-4-201ENST00000351817 IQGAP2Q13576 1575 aa31.66■■■□□ 2.66
NKX2-4-201ENST00000351817 MTUS2Q5JR59 1369 aa31.64■■■□□ 2.66
NKX2-4-201ENST00000351817 LRRIQ1Q96JM4 1722 aa31.62■■■□□ 2.65
NKX2-4-201ENST00000351817 SIN3AQ96ST3 1273 aa31.61■■■□□ 2.65
NKX2-4-201ENST00000351817 SUPT6HQ7KZ85 1726 aaKnown RBP31.53■■■□□ 2.64
NKX2-4-201ENST00000351817 EHBP1L1Q8N3D4 1523 aa31.52■■■□□ 2.64
NKX2-4-201ENST00000351817 NCOA2Q15596 1464 aa31.52■■■□□ 2.64
NKX2-4-201ENST00000351817 MYOM3Q5VTT5 1437 aa31.51■■■□□ 2.63
NKX2-4-201ENST00000351817 UGGT2Q9NYU1 1516 aa31.51■■■□□ 2.63
NKX2-4-201ENST00000351817 GRIN2AQ12879 1464 aa31.5■■■□□ 2.63
NKX2-4-201ENST00000351817 HFM1A2PYH4 1435 aa31.5■■■□□ 2.63
NKX2-4-201ENST00000351817 CCDC18Q5T9S5 1454 aa31.49■■■□□ 2.63
NKX2-4-201ENST00000351817 PTPN23Q9H3S7 1636 aa31.46■■■□□ 2.63
NKX2-4-201ENST00000351817 KIAA0586Q9BVV6 1533 aa31.46■■■□□ 2.63
NKX2-4-201ENST00000351817 MAGI1Q96QZ7 1491 aaPredicted RBP31.46■■■□□ 2.63
NKX2-4-201ENST00000351817 PTPRKQ15262 1439 aa31.45■■■□□ 2.63
NKX2-4-201ENST00000351817 PPP1R15AO75807 674 aaPredicted RBP31.44■■■□□ 2.62
NKX2-4-201ENST00000351817 UACAQ9BZF9 1416 aa31.43■■■□□ 2.62
NKX2-4-201ENST00000351817 ARHGEF11O15085 1522 aa31.4■■■□□ 2.62
NKX2-4-201ENST00000351817 HECW1Q76N89 1606 aa31.38■■■□□ 2.61
NKX2-4-201ENST00000351817 SYNJ2O15056 1496 aa31.37■■■□□ 2.61
NKX2-4-201ENST00000351817 NAIPQ13075 1403 aa31.37■■■□□ 2.61
NKX2-4-201ENST00000351817 DISP1Q96F81 1524 aa31.37■■■□□ 2.61
NKX2-4-201ENST00000351817 MAGI3Q5TCQ9 1506 aa31.35■■■□□ 2.61
NKX2-4-201ENST00000351817 KIAA0556O60303 1618 aa31.35■■■□□ 2.61
NKX2-4-201ENST00000351817 TONSLQ96HA7 1378 aa31.32■■■□□ 2.6
NKX2-4-201ENST00000351817 DDX10Q13206 875 aaKnown RBP31.32■■■□□ 2.6
NKX2-4-201ENST00000351817 CEP170Q5SW79 1584 aa31.32■■■□□ 2.6
NKX2-4-201ENST00000351817 EPRSP07814 1512 aaKnown RBP31.3■■■□□ 2.6
NKX2-4-201ENST00000351817 CHMP7Q8WUX9 453 aaPredicted RBP31.3■■■□□ 2.6
NKX2-4-201ENST00000351817 TCOF1Q13428 1488 aaKnown RBP31.29■■■□□ 2.6
NKX2-4-201ENST00000351817 CDK13Q14004 1512 aaKnown RBP31.24■■■□□ 2.59
NKX2-4-201ENST00000351817 KCNH8Q96L42 1107 aa31.24■■■□□ 2.59
NKX2-4-201ENST00000351817 SUPT16HQ9Y5B9 1047 aaKnown RBP31.23■■■□□ 2.59
NKX2-4-201ENST00000351817 GCC2Q8IWJ2 1684 aa31.22■■■□□ 2.59
NKX2-4-201ENST00000351817 NUP160Q12769 1436 aa31.21■■■□□ 2.59
NKX2-4-201ENST00000351817 MYT1Q01538 1121 aa31.21■■■□□ 2.59
NKX2-4-201ENST00000351817 FBLN2P98095 1184 aa31.2■■■□□ 2.58
NKX2-4-201ENST00000351817 AKNAQ7Z591 1439 aa31.18■■■□□ 2.58
NKX2-4-201ENST00000351817 MIA2Q96PC5 1412 aa31.16■■■□□ 2.58
NKX2-4-201ENST00000351817 HIRIP3Q9BW71 556 aaPredicted RBP31.14■■■□□ 2.58
NKX2-4-201ENST00000351817 RAPGEF6Q8TEU7 1601 aa31.13■■■□□ 2.57
NKX2-4-201ENST00000351817 NUP153P49790 1475 aaKnown RBP31.12■■■□□ 2.57
NKX2-4-201ENST00000351817 ARID3CA6NKF2 412 aa31.11■■■□□ 2.57
NKX2-4-201ENST00000351817 CCER2I3L3R5 266 aa31.1■■■□□ 2.57
NKX2-4-201ENST00000351817 RRP7BPQ9NSQ0 103 aa31.09■■■□□ 2.57
NKX2-4-201ENST00000351817 KDM5BQ9UGL1 1544 aa31.08■■■□□ 2.57
NKX2-4-201ENST00000351817 ANP32CO43423 234 aa31.07■■■□□ 2.56
NKX2-4-201ENST00000351817 JPH4Q96JJ6 628 aa31.05■■■□□ 2.56
NKX2-4-201ENST00000351817 CHIC2Q9UKJ5 165 aa31.05■■■□□ 2.56
NKX2-4-201ENST00000351817 CARMIL2Q6F5E8 1435 aa31■■■□□ 2.55
NKX2-4-201ENST00000351817 DENND4BO75064 1496 aaPredicted RBP31■■■□□ 2.55
NKX2-4-201ENST00000351817 KDM6BO15054 1643 aa31■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms