RNA–Protein interactions for RNA: ENST00000351193.6

NMD3-201, Transcript of NMD3 ribosome export adaptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NMD3, Length 3,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-201ENST00000351193 ERICH3Q5RHP9 1530 aa11.63□□□□□ -0.55
NMD3-201ENST00000351193 ANP32CO43423 234 aa11.63□□□□□ -0.55
NMD3-201ENST00000351193 ARHGAP35Q9NRY4 1499 aa11.63□□□□□ -0.55
NMD3-201ENST00000351193 KIF27Q86VH2 1401 aa11.61□□□□□ -0.55
NMD3-201ENST00000351193 SETD5Q9C0A6 1442 aa11.6□□□□□ -0.55
NMD3-201ENST00000351193 PPP1R15AO75807 674 aaPredicted RBP11.6□□□□□ -0.55
NMD3-201ENST00000351193 CUX2O14529 1486 aa11.6□□□□□ -0.55
NMD3-201ENST00000351193 PHLDB1Q86UU1 1377 aa11.57□□□□□ -0.56
NMD3-201ENST00000351193 BIVM-ERCC5R4GMW8 1640 aa11.57□□□□□ -0.56
NMD3-201ENST00000351193 CUX1P39880 1505 aa11.57□□□□□ -0.56
NMD3-201ENST00000351193 HNRNPUQ00839 825 aaKnown RBP eCLIP11.54□□□□□ -0.56
NMD3-201ENST00000351193 MSH5O43196 834 aa11.54□□□□□ -0.56
NMD3-201ENST00000351193 ERICH6Q7L0X2 663 aa11.52□□□□□ -0.56
NMD3-201ENST00000351193 CCER2I3L3R5 266 aa11.52□□□□□ -0.57
NMD3-201ENST00000351193 TIAM1Q13009 1591 aa11.51□□□□□ -0.57
NMD3-201ENST00000351193 TONSLQ96HA7 1378 aa11.51□□□□□ -0.57
NMD3-201ENST00000351193 LRRC9Q6ZRR7 1453 aa11.5□□□□□ -0.57
NMD3-201ENST00000351193 CDK11AQ9UQ88 783 aaPredicted RBP11.48□□□□□ -0.57
NMD3-201ENST00000351193 IGF1RP08069 1367 aa11.47□□□□□ -0.57
NMD3-201ENST00000351193 CARMIL1Q5VZK9 1371 aa11.47□□□□□ -0.57
NMD3-201ENST00000351193 CNGB1Q14028 1251 aaPredicted RBP11.44□□□□□ -0.58
NMD3-201ENST00000351193 FHOD3Q2V2M9 1422 aa11.44□□□□□ -0.58
NMD3-201ENST00000351193 TIMELESSQ9UNS1 1208 aa11.44□□□□□ -0.58
NMD3-201ENST00000351193 FAM9BQ8IZU0 186 aa11.41□□□□□ -0.58
NMD3-201ENST00000351193 CCDC184Q52MB2 194 aa11.41□□□□□ -0.58
NMD3-201ENST00000351193 PCF11O94913 1555 aaKnown RBP11.4□□□□□ -0.58
NMD3-201ENST00000351193 B4GALNT3Q6L9W6 998 aa11.4□□□□□ -0.58
NMD3-201ENST00000351193 FHAD1B1AJZ9 1412 aa11.4□□□□□ -0.59
NMD3-201ENST00000351193 CHIC2Q9UKJ5 165 aa11.39□□□□□ -0.59
NMD3-201ENST00000351193 SENP3-EIF4A1A0A087X0R7 540 aa11.38□□□□□ -0.59
NMD3-201ENST00000351193 CFTRP13569 1480 aa11.38□□□□□ -0.59
NMD3-201ENST00000351193 HSPA5P11021 654 aaKnown RBP11.38□□□□□ -0.59
NMD3-201ENST00000351193 CCDC18Q5T9S5 1454 aa11.37□□□□□ -0.59
NMD3-201ENST00000351193 RRP7BPQ9NSQ0 103 aa11.37□□□□□ -0.59
NMD3-201ENST00000351193 MAP3K1Q13233 1512 aa11.37□□□□□ -0.59
NMD3-201ENST00000351193 FANCIQ9NVI1 1328 aa11.37□□□□□ -0.59
NMD3-201ENST00000351193 WASHC2AQ641Q2 1341 aa11.36□□□□□ -0.59
NMD3-201ENST00000351193 FGD5Q6ZNL6 1462 aa11.36□□□□□ -0.59
NMD3-201ENST00000351193 NCAPD3P42695 1498 aa11.35□□□□□ -0.59
NMD3-201ENST00000351193 MTUS2Q5JR59 1369 aa11.35□□□□□ -0.59
NMD3-201ENST00000351193 PTPRKQ15262 1439 aa11.34□□□□□ -0.59
NMD3-201ENST00000351193 NBR1Q14596 966 aa11.34□□□□□ -0.59
NMD3-201ENST00000351193 PPP4R2Q9NY27 417 aa11.34□□□□□ -0.59
NMD3-201ENST00000351193 FOXD1Q16676 465 aa11.33□□□□□ -0.6
NMD3-201ENST00000351193 MRS2Q9HD23 443 aa11.33□□□□□ -0.6
NMD3-201ENST00000351193 FGD6Q6ZV73 1430 aa11.33□□□□□ -0.6
NMD3-201ENST00000351193 CFAP43Q8NDM7 1665 aa11.32□□□□□ -0.6
NMD3-201ENST00000351193 AQRO60306 1485 aaKnown RBP eCLIP11.32□□□□□ -0.65e-8■■■■□ 21.8
NMD3-201ENST00000351193 ARID3CA6NKF2 412 aa11.31□□□□□ -0.6
NMD3-201ENST00000351193 POLR3GLQ9BT43 218 aa11.31□□□□□ -0.6
NMD3-201ENST00000351193 HMGXB3Q12766 1538 aa11.31□□□□□ -0.6
NMD3-201ENST00000351193 UACAQ9BZF9 1416 aa11.31□□□□□ -0.6
NMD3-201ENST00000351193 EIF4G2P78344 907 aaKnown RBP eCLIP11.31□□□□□ -0.6
NMD3-201ENST00000351193 C11orf95C9JLR9 678 aaPredicted RBP11.3□□□□□ -0.6
NMD3-201ENST00000351193 DEKP35659 375 aaKnown RBP11.3□□□□□ -0.6
NMD3-201ENST00000351193 RAD54L2Q9Y4B4 1467 aa11.29□□□□□ -0.6
NMD3-201ENST00000351193 CASKIN1Q8WXD9 1431 aa11.28□□□□□ -0.6
NMD3-201ENST00000351193 FYCO1Q9BQS8 1478 aa11.27□□□□□ -0.6
NMD3-201ENST00000351193 HFM1A2PYH4 1435 aa11.27□□□□□ -0.6
NMD3-201ENST00000351193 NAIPQ13075 1403 aa11.27□□□□□ -0.6
NMD3-201ENST00000351193 PTPN23Q9H3S7 1636 aa11.27□□□□□ -0.61
NMD3-201ENST00000351193 PRKRIP1Q9H875 184 aaPredicted RBP11.27□□□□□ -0.61
NMD3-201ENST00000351193 L3MBTL2Q969R5 705 aa11.26□□□□□ -0.61
NMD3-201ENST00000351193 CADPSQ9ULU8 1353 aa11.26□□□□□ -0.61
NMD3-201ENST00000351193 PAK3O75914 559 aaPredicted RBP11.26□□□□□ -0.61
NMD3-201ENST00000351193 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.24□□□□□ -0.61
NMD3-201ENST00000351193 FMN1Q68DA7 1419 aa11.24□□□□□ -0.61
NMD3-201ENST00000351193 NOP58Q9Y2X3 529 aaKnown RBP11.24□□□□□ -0.61
NMD3-201ENST00000351193 CNTLNQ9NXG0 1405 aa11.23□□□□□ -0.61
NMD3-201ENST00000351193 NCOA2Q15596 1464 aa11.23□□□□□ -0.61
NMD3-201ENST00000351193 KDM5BQ9UGL1 1544 aa11.22□□□□□ -0.61
NMD3-201ENST00000351193 ZNF326Q5BKZ1 582 aaKnown RBP11.22□□□□□ -0.61
NMD3-201ENST00000351193 ERICH6BQ5W0A0 696 aa11.22□□□□□ -0.61
NMD3-201ENST00000351193 MPHOSPH9Q99550 1183 aa11.22□□□□□ -0.61
NMD3-201ENST00000351193 MYOM3Q5VTT5 1437 aa11.21□□□□□ -0.61
NMD3-201ENST00000351193 ZBED9Q6R2W3 1325 aa11.21□□□□□ -0.61
NMD3-201ENST00000351193 CCDC7Q96M83 1385 aa11.21□□□□□ -0.62
NMD3-201ENST00000351193 AKNAQ7Z591 1439 aa11.2□□□□□ -0.62
NMD3-201ENST00000351193 NBPF8Q3BBV2 869 aa11.2□□□□□ -0.62
NMD3-201ENST00000351193 CCDC136Q96JN2 1154 aa11.2□□□□□ -0.62
NMD3-201ENST00000351193 EFCAB5A4FU69 1503 aa11.18□□□□□ -0.62
NMD3-201ENST00000351193 KIF7Q2M1P5 1343 aa11.18□□□□□ -0.62
NMD3-201ENST00000351193 SNAPC4Q5SXM2 1469 aa11.18□□□□□ -0.62
NMD3-201ENST00000351193 NPM2Q86SE8 214 aaKnown RBP11.18□□□□□ -0.62
NMD3-201ENST00000351193 FANCD2Q9BXW9 1451 aa11.18□□□□□ -0.62
NMD3-201ENST00000351193 TDRD9Q8NDG6 1382 aaKnown RBP11.17□□□□□ -0.62
NMD3-201ENST00000351193 ANP32AP39687 249 aaKnown RBP11.16□□□□□ -0.62
NMD3-201ENST00000351193 PRDM2Q13029 1718 aa11.16□□□□□ -0.62
NMD3-201ENST00000351193 DENND4BO75064 1496 aaPredicted RBP11.16□□□□□ -0.62
NMD3-201ENST00000351193 KDM6BO15054 1643 aa11.15□□□□□ -0.62
NMD3-201ENST00000351193 SALL2Q9Y467 1007 aaPredicted RBP11.15□□□□□ -0.62
NMD3-201ENST00000351193 POLA1P09884 1462 aaPredicted RBP11.15□□□□□ -0.62
NMD3-201ENST00000351193 RTL5Q5HYW3 569 aaPredicted RBP11.14□□□□□ -0.63
NMD3-201ENST00000351193 MYT1LQ9UL68 1186 aa11.14□□□□□ -0.63
NMD3-201ENST00000351193 NCOA1Q15788 1441 aa11.14□□□□□ -0.63
NMD3-201ENST00000351193 LRRIQ1Q96JM4 1722 aa11.14□□□□□ -0.63
NMD3-201ENST00000351193 SLC4A1APQ9BWU0 796 aaKnown RBP11.14□□□□□ -0.63
NMD3-201ENST00000351193 ZBTB47Q9UFB7 747 aaPredicted RBP11.14□□□□□ -0.63
NMD3-201ENST00000351193 CTTNBP2Q8WZ74 1663 aa11.13□□□□□ -0.63
NMD3-201ENST00000351193 SUPT6HQ7KZ85 1726 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 277.7 ms