RNA–Protein interactions for RNA: ENST00000349299.7

H2AFV-203, Transcript of H2A histone family member V, humanhuman

TSL 2 BASIC

Gene H2AFV, Length 596 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-203ENST00000349299 ADAMTS12P58397 1594 aa16.37■□□□□ 0.21
H2AFV-203ENST00000349299 CACNB1Q02641 598 aaPredicted RBP16.36■□□□□ 0.21
H2AFV-203ENST00000349299 CUL7Q14999 1698 aa16.36■□□□□ 0.21
H2AFV-203ENST00000349299 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.34■□□□□ 0.213e-6■□□□□ 11.3
H2AFV-203ENST00000349299 RUSC2Q8N2Y8 1516 aa16.33■□□□□ 0.2
H2AFV-203ENST00000349299 SYNJ2O15056 1496 aa16.31■□□□□ 0.2
H2AFV-203ENST00000349299 FHAD1B1AJZ9 1412 aa16.28■□□□□ 0.2
H2AFV-203ENST00000349299 IGF1RP08069 1367 aa16.27■□□□□ 0.2
H2AFV-203ENST00000349299 C1QBPQ07021 282 aaKnown RBP16.27■□□□□ 0.2
H2AFV-203ENST00000349299 GRIN2AQ12879 1464 aa16.24■□□□□ 0.19
H2AFV-203ENST00000349299 EEA1Q15075 1411 aa16.24■□□□□ 0.19
H2AFV-203ENST00000349299 FBLN2P98095 1184 aa16.23■□□□□ 0.19
H2AFV-203ENST00000349299 CHMP7Q8WUX9 453 aaPredicted RBP16.23■□□□□ 0.19
H2AFV-203ENST00000349299 CEP170Q5SW79 1584 aa16.19■□□□□ 0.18
H2AFV-203ENST00000349299 CARMIL1Q5VZK9 1371 aa16.19■□□□□ 0.18
H2AFV-203ENST00000349299 OSCARQ8IYS5 282 aa16.19■□□□□ 0.18
H2AFV-203ENST00000349299 CLASP1Q7Z460 1538 aa16.17■□□□□ 0.18
H2AFV-203ENST00000349299 RAPGEF2Q9Y4G8 1499 aa16.15■□□□□ 0.18
H2AFV-203ENST00000349299 CTTNBP2Q8WZ74 1663 aa16.14■□□□□ 0.18
H2AFV-203ENST00000349299 NUP160Q12769 1436 aa16.14■□□□□ 0.17
H2AFV-203ENST00000349299 PRXQ9BXM0 1461 aa16.14■□□□□ 0.17
H2AFV-203ENST00000349299 SLC4A2P04920 1241 aa16.13■□□□□ 0.17
H2AFV-203ENST00000349299 CSRNP3Q8WYN3 585 aa16.13■□□□□ 0.17
H2AFV-203ENST00000349299 KIF21BO75037 1637 aa16.12■□□□□ 0.17
H2AFV-203ENST00000349299 FAM9AQ8IZU1 332 aaPredicted RBP16.12■□□□□ 0.17
H2AFV-203ENST00000349299 U3KPZ7 1027 aaPredicted RBP16.09■□□□□ 0.17
H2AFV-203ENST00000349299 SHROOM2Q13796 1616 aa16.08■□□□□ 0.16
H2AFV-203ENST00000349299 DNAJC5Q9H3Z4 198 aa16.07■□□□□ 0.16
H2AFV-203ENST00000349299 IQGAP2Q13576 1575 aa16.04■□□□□ 0.16
H2AFV-203ENST00000349299 KIAA0586Q9BVV6 1533 aa16.04■□□□□ 0.16
H2AFV-203ENST00000349299 RIMBP3CA6NJZ7 1639 aa16.04■□□□□ 0.16
H2AFV-203ENST00000349299 RIMBP3BA6NNM3 1639 aa16.04■□□□□ 0.16
H2AFV-203ENST00000349299 RIMBP3Q9UFD9 1639 aa16.04■□□□□ 0.16
H2AFV-203ENST00000349299 ARHGEF11O15085 1522 aa16■□□□□ 0.15
H2AFV-203ENST00000349299 GOLGA3Q08378 1498 aa15.98■□□□□ 0.15
H2AFV-203ENST00000349299 ERCC6L2Q5T890 1561 aa15.96■□□□□ 0.14
H2AFV-203ENST00000349299 SLC4A1APQ9BWU0 796 aaKnown RBP15.95■□□□□ 0.14
H2AFV-203ENST00000349299 UGGT2Q9NYU1 1516 aa15.94■□□□□ 0.14
H2AFV-203ENST00000349299 JPH4Q96JJ6 628 aa15.93■□□□□ 0.14
H2AFV-203ENST00000349299 PRG4Q92954 1404 aaPredicted RBP15.92■□□□□ 0.14
H2AFV-203ENST00000349299 EHMT2Q96KQ7 1210 aa15.89■□□□□ 0.13
H2AFV-203ENST00000349299 KIAA0556O60303 1618 aa15.89■□□□□ 0.13
H2AFV-203ENST00000349299 ARAP1Q96P48 1450 aa15.88■□□□□ 0.13
H2AFV-203ENST00000349299 DISP1Q96F81 1524 aa15.88■□□□□ 0.13
H2AFV-203ENST00000349299 SAMD9Q5K651 1589 aa15.87■□□□□ 0.13
H2AFV-203ENST00000349299 UBTFP17480 764 aaKnown RBP15.86■□□□□ 0.13
H2AFV-203ENST00000349299 CARMIL2Q6F5E8 1435 aa15.85■□□□□ 0.13
H2AFV-203ENST00000349299 EFCAB5A4FU69 1503 aa15.81■□□□□ 0.12
H2AFV-203ENST00000349299 TNIKQ9UKE5 1360 aa15.78■□□□□ 0.12
H2AFV-203ENST00000349299 CYB5RLQ6IPT4 315 aa15.76■□□□□ 0.11
H2AFV-203ENST00000349299 SPINK5Q9NQ38 1064 aaPredicted RBP15.76■□□□□ 0.11
H2AFV-203ENST00000349299 RANGAP1P46060 587 aaPredicted RBP15.75■□□□□ 0.11
H2AFV-203ENST00000349299 PTPRGP23470 1445 aa15.74■□□□□ 0.11
H2AFV-203ENST00000349299 ADCY10Q96PN6 1610 aa15.73■□□□□ 0.11
H2AFV-203ENST00000349299 LOC105371045A0A1W2PR82 267 aa15.73■□□□□ 0.11
H2AFV-203ENST00000349299 ARHGAP35Q9NRY4 1499 aa15.72■□□□□ 0.11
H2AFV-203ENST00000349299 FHOD3Q2V2M9 1422 aa15.7■□□□□ 0.1
H2AFV-203ENST00000349299 P3H3Q8IVL6 736 aa15.7■□□□□ 0.1
H2AFV-203ENST00000349299 TTBK1Q5TCY1 1321 aaPredicted RBP15.69■□□□□ 0.1
H2AFV-203ENST00000349299 ABCA8O94911 1581 aa15.69■□□□□ 0.1
H2AFV-203ENST00000349299 RAPGEF6Q8TEU7 1601 aa15.68■□□□□ 0.1
H2AFV-203ENST00000349299 CLIP1P30622 1438 aa15.68■□□□□ 0.1
H2AFV-203ENST00000349299 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.67■□□□□ 0.1
H2AFV-203ENST00000349299 CAPN15O75808 1086 aa15.67■□□□□ 0.1
H2AFV-203ENST00000349299 HNRNPUL2Q1KMD3 747 aaKnown RBP15.67■□□□□ 0.1
H2AFV-203ENST00000349299 ABCC2Q92887 1545 aa15.67■□□□□ 0.1
H2AFV-203ENST00000349299 CEP162Q5TB80 1403 aa15.67■□□□□ 0.1
H2AFV-203ENST00000349299 UACAQ9BZF9 1416 aa15.66■□□□□ 0.1
H2AFV-203ENST00000349299 UHRF1BP1LA0JNW5 1464 aa15.65■□□□□ 0.1
H2AFV-203ENST00000349299 PLB1Q6P1J6 1458 aa15.65■□□□□ 0.1
H2AFV-203ENST00000349299 MYCNP04198 464 aaPredicted RBP15.64■□□□□ 0.09
H2AFV-203ENST00000349299 FOXD4L1Q9NU39 408 aa15.64■□□□□ 0.09
H2AFV-203ENST00000349299 ZCCHC11Q5TAX3 1644 aaKnown RBP15.63■□□□□ 0.09
H2AFV-203ENST00000349299 FMN1Q68DA7 1419 aa15.6■□□□□ 0.09
H2AFV-203ENST00000349299 LRRIQ1Q96JM4 1722 aa15.6■□□□□ 0.09
H2AFV-203ENST00000349299 SAMD1Q6SPF0 538 aaPredicted RBP15.6■□□□□ 0.09
H2AFV-203ENST00000349299 HECW1Q76N89 1606 aa15.59■□□□□ 0.09
H2AFV-203ENST00000349299 APLP2Q06481 763 aa15.59■□□□□ 0.09
H2AFV-203ENST00000349299 KDM5BQ9UGL1 1544 aa15.58■□□□□ 0.09
H2AFV-203ENST00000349299 PCF11O94913 1555 aaKnown RBP15.58■□□□□ 0.09
H2AFV-203ENST00000349299 ZBTB22O15209 634 aa15.56■□□□□ 0.08
H2AFV-203ENST00000349299 DSG3P32926 999 aa15.56■□□□□ 0.08
H2AFV-203ENST00000349299 MAPKBP1O60336 1514 aa15.56■□□□□ 0.08
H2AFV-203ENST00000349299 NUP153P49790 1475 aaKnown RBP15.55■□□□□ 0.08
H2AFV-203ENST00000349299 NPM1P06748 294 aaKnown RBP eCLIP15.54■□□□□ 0.08
H2AFV-203ENST00000349299 KIF13AQ9H1H9 1805 aa15.54■□□□□ 0.08
H2AFV-203ENST00000349299 FYCO1Q9BQS8 1478 aa15.52■□□□□ 0.07
H2AFV-203ENST00000349299 CASKIN1Q8WXD9 1431 aa15.51■□□□□ 0.07
H2AFV-203ENST00000349299 ATP10BO94823 1461 aa15.51■□□□□ 0.07
H2AFV-203ENST00000349299 TRHP20396 242 aaPredicted RBP15.49■□□□□ 0.07
H2AFV-203ENST00000349299 ZNF219Q9P2Y4 722 aaPredicted RBP15.49■□□□□ 0.07
H2AFV-203ENST00000349299 EPRSP07814 1512 aaKnown RBP15.48■□□□□ 0.07
H2AFV-203ENST00000349299 CDK13Q14004 1512 aaKnown RBP15.48■□□□□ 0.07
H2AFV-203ENST00000349299 ASXL2Q76L83 1435 aa15.48■□□□□ 0.07
H2AFV-203ENST00000349299 DIP2BQ9P265 1576 aa15.48■□□□□ 0.07
H2AFV-203ENST00000349299 VPS8Q8N3P4 1428 aa15.47■□□□□ 0.07
H2AFV-203ENST00000349299 ARID3CA6NKF2 412 aa15.46■□□□□ 0.07
H2AFV-203ENST00000349299 CFAP43Q8NDM7 1665 aa15.46■□□□□ 0.07
H2AFV-203ENST00000349299 CCDC18Q5T9S5 1454 aa15.46■□□□□ 0.06
H2AFV-203ENST00000349299 ATP1B4Q9UN42 357 aaPredicted RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms