RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 MSH5O43196 834 aa14.64□□□□□ -0.07
CHRNA1-202ENST00000348749 NEFLP07196 543 aa14.64□□□□□ -0.07
CHRNA1-202ENST00000348749 PRKCSHP14314 528 aaPredicted RBP14.64□□□□□ -0.07
CHRNA1-202ENST00000348749 TIAM1Q13009 1591 aa14.64□□□□□ -0.07
CHRNA1-202ENST00000348749 KCNH8Q96L42 1107 aa14.64□□□□□ -0.07
CHRNA1-202ENST00000348749 MYT1LQ9UL68 1186 aa14.64□□□□□ -0.07
CHRNA1-202ENST00000348749 RANGAP1P46060 587 aaPredicted RBP14.6□□□□□ -0.07
CHRNA1-202ENST00000348749 TIMELESSQ9UNS1 1208 aa14.6□□□□□ -0.07
CHRNA1-202ENST00000348749 MAPKBP1O60336 1514 aa14.58□□□□□ -0.08
CHRNA1-202ENST00000348749 CFAP43Q8NDM7 1665 aa14.58□□□□□ -0.08
CHRNA1-202ENST00000348749 FHAD1B1AJZ9 1412 aa14.57□□□□□ -0.08
CHRNA1-202ENST00000348749 SETD5Q9C0A6 1442 aa14.56□□□□□ -0.08
CHRNA1-202ENST00000348749 RAB3GAP2Q9H2M9 1393 aa14.56□□□□□ -0.08
CHRNA1-202ENST00000348749 LRRC9Q6ZRR7 1453 aa14.55□□□□□ -0.08
CHRNA1-202ENST00000348749 IGF1RP08069 1367 aa14.55□□□□□ -0.08
CHRNA1-202ENST00000348749 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.54□□□□□ -0.08
CHRNA1-202ENST00000348749 CCER2I3L3R5 266 aa14.53□□□□□ -0.08
CHRNA1-202ENST00000348749 ERICH6Q7L0X2 663 aa14.51□□□□□ -0.09
CHRNA1-202ENST00000348749 CARMIL1Q5VZK9 1371 aa14.5□□□□□ -0.09
CHRNA1-202ENST00000348749 EFCAB5A4FU69 1503 aa14.49□□□□□ -0.09
CHRNA1-202ENST00000348749 AQRO60306 1485 aaKnown RBP eCLIP14.49□□□□□ -0.09
CHRNA1-202ENST00000348749 ITGAEP38570 1179 aa14.49□□□□□ -0.09
CHRNA1-202ENST00000348749 PPP1R15AO75807 674 aaPredicted RBP14.47□□□□□ -0.09
CHRNA1-202ENST00000348749 CADPSQ9ULU8 1353 aa14.47□□□□□ -0.09
CHRNA1-202ENST00000348749 FYCO1Q9BQS8 1478 aa14.46□□□□□ -0.09
CHRNA1-202ENST00000348749 CDK11AQ9UQ88 783 aaPredicted RBP14.45□□□□□ -0.1
CHRNA1-202ENST00000348749 FGD5Q6ZNL6 1462 aa14.45□□□□□ -0.1
CHRNA1-202ENST00000348749 DDX10Q13206 875 aaKnown RBP14.44□□□□□ -0.1
CHRNA1-202ENST00000348749 PHLDB1Q86UU1 1377 aa14.44□□□□□ -0.1
CHRNA1-202ENST00000348749 WDR97A6NE52 1622 aa14.44□□□□□ -0.1
CHRNA1-202ENST00000348749 PCF11O94913 1555 aaKnown RBP14.43□□□□□ -0.1
CHRNA1-202ENST00000348749 DEKP35659 375 aaKnown RBP14.42□□□□□ -0.1
CHRNA1-202ENST00000348749 CASKIN1Q8WXD9 1431 aa14.41□□□□□ -0.1
CHRNA1-202ENST00000348749 CUL7Q14999 1698 aa14.41□□□□□ -0.1
CHRNA1-202ENST00000348749 ERICH6BQ5W0A0 696 aa14.4□□□□□ -0.1
CHRNA1-202ENST00000348749 ANP32CO43423 234 aa14.39□□□□□ -0.11
CHRNA1-202ENST00000348749 TRIM52Q96A61 297 aa14.39□□□□□ -0.11
CHRNA1-202ENST00000348749 CTTNBP2Q8WZ74 1663 aa14.37□□□□□ -0.11
CHRNA1-202ENST00000348749 ABCA10Q8WWZ4 1543 aa14.37□□□□□ -0.11
CHRNA1-202ENST00000348749 DNMBPQ6XZF7 1577 aa14.37□□□□□ -0.11
CHRNA1-202ENST00000348749 FMN1Q68DA7 1419 aa14.35□□□□□ -0.11
CHRNA1-202ENST00000348749 THOC2Q8NI27 1593 aaKnown RBP14.32□□□□□ -0.12
CHRNA1-202ENST00000348749 FAM50AQ14320 339 aaKnown RBP14.32□□□□□ -0.12
CHRNA1-202ENST00000348749 FGD6Q6ZV73 1430 aa14.31□□□□□ -0.12
CHRNA1-202ENST00000348749 FANCD2Q9BXW9 1451 aa14.3□□□□□ -0.12
CHRNA1-202ENST00000348749 HFM1A2PYH4 1435 aa14.3□□□□□ -0.12
CHRNA1-202ENST00000348749 UACAQ9BZF9 1416 aa14.3□□□□□ -0.12
CHRNA1-202ENST00000348749 PPP4R2Q9NY27 417 aa14.29□□□□□ -0.12
CHRNA1-202ENST00000348749 SIN3AQ96ST3 1273 aa14.28□□□□□ -0.12
CHRNA1-202ENST00000348749 FHOD3Q2V2M9 1422 aa14.28□□□□□ -0.12
CHRNA1-202ENST00000348749 SNAPC4Q5SXM2 1469 aa14.27□□□□□ -0.12
CHRNA1-202ENST00000348749 KIF21AQ7Z4S6 1674 aa14.27□□□□□ -0.12
CHRNA1-202ENST00000348749 CCDC18Q5T9S5 1454 aa14.27□□□□□ -0.13
CHRNA1-202ENST00000348749 SAMD9Q5K651 1589 aa14.27□□□□□ -0.13
CHRNA1-202ENST00000348749 PTPN23Q9H3S7 1636 aa14.26□□□□□ -0.13
CHRNA1-202ENST00000348749 TOPBP1Q92547 1522 aa14.25□□□□□ -0.13
CHRNA1-202ENST00000348749 NOP58Q9Y2X3 529 aaKnown RBP14.25□□□□□ -0.13
CHRNA1-202ENST00000348749 TONSLQ96HA7 1378 aa14.25□□□□□ -0.13
CHRNA1-202ENST00000348749 POLA1P09884 1462 aaPredicted RBP14.25□□□□□ -0.13
CHRNA1-202ENST00000348749 SUPT6HQ7KZ85 1726 aaKnown RBP14.23□□□□□ -0.13
CHRNA1-202ENST00000348749 EHBP1L1Q8N3D4 1523 aa14.22□□□□□ -0.13
CHRNA1-202ENST00000348749 ANO8Q9HCE9 1232 aaPredicted RBP14.22□□□□□ -0.13
CHRNA1-202ENST00000348749 MYOM3Q5VTT5 1437 aa14.21□□□□□ -0.13
CHRNA1-202ENST00000348749 HNRNPUQ00839 825 aaKnown RBP eCLIP14.21□□□□□ -0.13
CHRNA1-202ENST00000348749 AKNAQ7Z591 1439 aa14.2□□□□□ -0.14
CHRNA1-202ENST00000348749 MTUS2Q5JR59 1369 aa14.2□□□□□ -0.14
CHRNA1-202ENST00000348749 GRIN2BQ13224 1484 aa14.2□□□□□ -0.14
CHRNA1-202ENST00000348749 IRX6P78412 446 aaPredicted RBP14.2□□□□□ -0.14
CHRNA1-202ENST00000348749 NAIPQ13075 1403 aa14.19□□□□□ -0.14
CHRNA1-202ENST00000348749 RAD54L2Q9Y4B4 1467 aa14.19□□□□□ -0.14
CHRNA1-202ENST00000348749 ARHGEF11O15085 1522 aa14.18□□□□□ -0.14
CHRNA1-202ENST00000348749 ABCA5Q8WWZ7 1642 aa14.18□□□□□ -0.14
CHRNA1-202ENST00000348749 GCC2Q8IWJ2 1684 aa14.18□□□□□ -0.14
CHRNA1-202ENST00000348749 NCOA2Q15596 1464 aa14.17□□□□□ -0.14
CHRNA1-202ENST00000348749 HECW1Q76N89 1606 aa14.17□□□□□ -0.14
CHRNA1-202ENST00000348749 LRRIQ1Q96JM4 1722 aa14.17□□□□□ -0.14
CHRNA1-202ENST00000348749 TCOF1Q13428 1488 aaKnown RBP14.16□□□□□ -0.14
CHRNA1-202ENST00000348749 KDM5BQ9UGL1 1544 aa14.16□□□□□ -0.14
CHRNA1-202ENST00000348749 UGGT2Q9NYU1 1516 aa14.16□□□□□ -0.14
CHRNA1-202ENST00000348749 LAMC3Q9Y6N6 1575 aa14.15□□□□□ -0.14
CHRNA1-202ENST00000348749 P3H3Q8IVL6 736 aa14.15□□□□□ -0.14
CHRNA1-202ENST00000348749 HIRIP3Q9BW71 556 aaPredicted RBP14.15□□□□□ -0.14
CHRNA1-202ENST00000348749 PTPRKQ15262 1439 aa14.15□□□□□ -0.14
CHRNA1-202ENST00000348749 ATP1B4Q9UN42 357 aaPredicted RBP14.14□□□□□ -0.15
CHRNA1-202ENST00000348749 PAK3O75914 559 aaPredicted RBP14.14□□□□□ -0.15
CHRNA1-202ENST00000348749 NBR1Q14596 966 aa14.14□□□□□ -0.15
CHRNA1-202ENST00000348749 ERCC6Q03468 1493 aa14.12□□□□□ -0.15
CHRNA1-202ENST00000348749 SALL2Q9Y467 1007 aaPredicted RBP14.12□□□□□ -0.15
CHRNA1-202ENST00000348749 RTL5Q5HYW3 569 aaPredicted RBP14.1□□□□□ -0.15
CHRNA1-202ENST00000348749 B4GALNT3Q6L9W6 998 aa14.09□□□□□ -0.15
CHRNA1-202ENST00000348749 IPO9Q96P70 1041 aaKnown RBP14.09□□□□□ -0.15
CHRNA1-202ENST00000348749 MIA2Q96PC5 1412 aa14.09□□□□□ -0.15
CHRNA1-202ENST00000348749 GAPVD1Q14C86 1478 aa14.08□□□□□ -0.16
CHRNA1-202ENST00000348749 ANP32AP39687 249 aaKnown RBP14.07□□□□□ -0.16
CHRNA1-202ENST00000348749 URB2Q14146 1524 aaKnown RBP14.07□□□□□ -0.16
CHRNA1-202ENST00000348749 ZBED9Q6R2W3 1325 aa14.06□□□□□ -0.16
CHRNA1-202ENST00000348749 WASHC2AQ641Q2 1341 aa14.05□□□□□ -0.16
CHRNA1-202ENST00000348749 CNTLNQ9NXG0 1405 aa14.04□□□□□ -0.16
CHRNA1-202ENST00000348749 POLR1AO95602 1720 aaPredicted RBP14.04□□□□□ -0.16
CHRNA1-202ENST00000348749 ZBTB47Q9UFB7 747 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms