RNA–Protein interactions for RNA: ENST00000348124.5

TRAF6-201, Transcript of TNF receptor associated factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF6, Length 2,558 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6-201ENST00000348124 DNAJC5BQ9UF47 199 aa21.68■■□□□ 1.06
TRAF6-201ENST00000348124 SIN3AQ96ST3 1273 aa21.65■■□□□ 1.06
TRAF6-201ENST00000348124 CCER2I3L3R5 266 aa21.64■■□□□ 1.06
TRAF6-201ENST00000348124 BIVM-ERCC5R4GMW8 1640 aa21.64■■□□□ 1.05
TRAF6-201ENST00000348124 SETD5Q9C0A6 1442 aa21.62■■□□□ 1.05
TRAF6-201ENST00000348124 MSH5O43196 834 aa21.62■■□□□ 1.05
TRAF6-201ENST00000348124 ARHGAP35Q9NRY4 1499 aa21.62■■□□□ 1.05
TRAF6-201ENST00000348124 ANP32CO43423 234 aa21.61■■□□□ 1.05
TRAF6-201ENST00000348124 HIRIP3Q9BW71 556 aaPredicted RBP21.6■■□□□ 1.05
TRAF6-201ENST00000348124 KIF27Q86VH2 1401 aa21.54■■□□□ 1.04
TRAF6-201ENST00000348124 TIMELESSQ9UNS1 1208 aa21.52■■□□□ 1.04
TRAF6-201ENST00000348124 CFTRP13569 1480 aa21.49■■□□□ 1.03
TRAF6-201ENST00000348124 FANCIQ9NVI1 1328 aa21.49■■□□□ 1.03
TRAF6-201ENST00000348124 FAM50AQ14320 339 aaKnown RBP21.49■■□□□ 1.03
TRAF6-201ENST00000348124 CADPSQ9ULU8 1353 aa21.48■■□□□ 1.03
TRAF6-201ENST00000348124 TIAM1Q13009 1591 aa21.48■■□□□ 1.03
TRAF6-201ENST00000348124 PHLDB1Q86UU1 1377 aa21.46■■□□□ 1.03
TRAF6-201ENST00000348124 CUX1P39880 1505 aa21.46■■□□□ 1.03
TRAF6-201ENST00000348124 ERICH6Q7L0X2 663 aa21.45■■□□□ 1.02
TRAF6-201ENST00000348124 CDK11AQ9UQ88 783 aaPredicted RBP21.45■■□□□ 1.02
TRAF6-201ENST00000348124 MAP3K1Q13233 1512 aa21.44■■□□□ 1.02
TRAF6-201ENST00000348124 LRRC9Q6ZRR7 1453 aa21.42■■□□□ 1.02
TRAF6-201ENST00000348124 IRX6P78412 446 aaPredicted RBP21.41■■□□□ 1.02
TRAF6-201ENST00000348124 NESP48681 1621 aa21.39■■□□□ 1.01
TRAF6-201ENST00000348124 HNRNPUQ00839 825 aaKnown RBP eCLIP21.38■■□□□ 1.01
TRAF6-201ENST00000348124 TONSLQ96HA7 1378 aa21.33■■□□□ 1
TRAF6-201ENST00000348124 IGF1RP08069 1367 aa21.27■■□□□ 1
TRAF6-201ENST00000348124 ATP1B4Q9UN42 357 aaPredicted RBP21.26■□□□□ 0.99
TRAF6-201ENST00000348124 FHAD1B1AJZ9 1412 aa21.24■□□□□ 0.99
TRAF6-201ENST00000348124 FANCD2Q9BXW9 1451 aa21.24■□□□□ 0.99
TRAF6-201ENST00000348124 MYT1LQ9UL68 1186 aa21.24■□□□□ 0.99
TRAF6-201ENST00000348124 ERICH6BQ5W0A0 696 aa21.24■□□□□ 0.99
TRAF6-201ENST00000348124 PPP4R2Q9NY27 417 aa21.24■□□□□ 0.99
TRAF6-201ENST00000348124 CFAP43Q8NDM7 1665 aa21.22■□□□□ 0.99
TRAF6-201ENST00000348124 P3H3Q8IVL6 736 aa21.21■□□□□ 0.99
TRAF6-201ENST00000348124 CARMIL1Q5VZK9 1371 aa21.2■□□□□ 0.98
TRAF6-201ENST00000348124 PCF11O94913 1555 aaKnown RBP21.19■□□□□ 0.98
TRAF6-201ENST00000348124 DEKP35659 375 aaKnown RBP21.19■□□□□ 0.98
TRAF6-201ENST00000348124 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.18■□□□□ 0.98
TRAF6-201ENST00000348124 CCDC18Q5T9S5 1454 aa21.16■□□□□ 0.98
TRAF6-201ENST00000348124 LAMC3Q9Y6N6 1575 aa21.13■□□□□ 0.97
TRAF6-201ENST00000348124 UACAQ9BZF9 1416 aa21.12■□□□□ 0.97
TRAF6-201ENST00000348124 B4GALNT3Q6L9W6 998 aa21.12■□□□□ 0.97
TRAF6-201ENST00000348124 PRDM2Q13029 1718 aa21.12■□□□□ 0.97
TRAF6-201ENST00000348124 WASHC2AQ641Q2 1341 aa21.12■□□□□ 0.97
TRAF6-201ENST00000348124 PDS5BQ9NTI5 1447 aa21.09■□□□□ 0.97
TRAF6-201ENST00000348124 CCDC184Q52MB2 194 aa21.09■□□□□ 0.97
TRAF6-201ENST00000348124 FHOD3Q2V2M9 1422 aa21.08■□□□□ 0.97
TRAF6-201ENST00000348124 FGD6Q6ZV73 1430 aa21.08■□□□□ 0.97
TRAF6-201ENST00000348124 HSPA5P11021 654 aaKnown RBP21.08■□□□□ 0.97
TRAF6-201ENST00000348124 HFM1A2PYH4 1435 aa21.07■□□□□ 0.96
TRAF6-201ENST00000348124 KDM5BQ9UGL1 1544 aa21.07■□□□□ 0.96
TRAF6-201ENST00000348124 FYCO1Q9BQS8 1478 aa21.06■□□□□ 0.96
TRAF6-201ENST00000348124 NOP58Q9Y2X3 529 aaKnown RBP21.06■□□□□ 0.96
TRAF6-201ENST00000348124 PTPRKQ15262 1439 aa21.05■□□□□ 0.96
TRAF6-201ENST00000348124 FAM9BQ8IZU0 186 aa21.03■□□□□ 0.96
TRAF6-201ENST00000348124 PTPN23Q9H3S7 1636 aa21.03■□□□□ 0.96
TRAF6-201ENST00000348124 CASKIN1Q8WXD9 1431 aa21.03■□□□□ 0.96
TRAF6-201ENST00000348124 FGD5Q6ZNL6 1462 aa21.03■□□□□ 0.96
TRAF6-201ENST00000348124 NBR1Q14596 966 aa21.02■□□□□ 0.96
TRAF6-201ENST00000348124 AQRO60306 1485 aaKnown RBP eCLIP21.01■□□□□ 0.95
TRAF6-201ENST00000348124 CNTLNQ9NXG0 1405 aa21■□□□□ 0.95
TRAF6-201ENST00000348124 NAIPQ13075 1403 aa21■□□□□ 0.95
TRAF6-201ENST00000348124 PAK3O75914 559 aaPredicted RBP20.99■□□□□ 0.95
TRAF6-201ENST00000348124 ZBED9Q6R2W3 1325 aa20.99■□□□□ 0.95
TRAF6-201ENST00000348124 NCOA2Q15596 1464 aa20.99■□□□□ 0.95
TRAF6-201ENST00000348124 EIF4G2P78344 907 aaKnown RBP eCLIP20.99■□□□□ 0.95
TRAF6-201ENST00000348124 TOPBP1Q92547 1522 aa20.98■□□□□ 0.95
TRAF6-201ENST00000348124 MRS2Q9HD23 443 aa20.98■□□□□ 0.95
TRAF6-201ENST00000348124 PRKRIP1Q9H875 184 aaPredicted RBP20.97■□□□□ 0.95
TRAF6-201ENST00000348124 URB2Q14146 1524 aaKnown RBP20.96■□□□□ 0.95
TRAF6-201ENST00000348124 RAD54L2Q9Y4B4 1467 aa20.95■□□□□ 0.94
TRAF6-201ENST00000348124 MTUS2Q5JR59 1369 aa20.95■□□□□ 0.94
TRAF6-201ENST00000348124 KIF21AQ7Z4S6 1674 aa20.93■□□□□ 0.94
TRAF6-201ENST00000348124 FMN1Q68DA7 1419 aa20.93■□□□□ 0.94
TRAF6-201ENST00000348124 DNMBPQ6XZF7 1577 aa20.93■□□□□ 0.94
TRAF6-201ENST00000348124 EFCAB5A4FU69 1503 aa20.93■□□□□ 0.94
TRAF6-201ENST00000348124 C11orf95C9JLR9 678 aaPredicted RBP20.92■□□□□ 0.94
TRAF6-201ENST00000348124 POLA1P09884 1462 aaPredicted RBP20.91■□□□□ 0.94
TRAF6-201ENST00000348124 CCDC7Q96M83 1385 aa20.9■□□□□ 0.94
TRAF6-201ENST00000348124 PRKCSHP14314 528 aaPredicted RBP20.89■□□□□ 0.93
TRAF6-201ENST00000348124 NCOA1Q15788 1441 aa20.87■□□□□ 0.93
TRAF6-201ENST00000348124 MYOM3Q5VTT5 1437 aa20.86■□□□□ 0.93
TRAF6-201ENST00000348124 RRP7BPQ9NSQ0 103 aa20.86■□□□□ 0.93
TRAF6-201ENST00000348124 ANP32AP39687 249 aaKnown RBP20.86■□□□□ 0.93
TRAF6-201ENST00000348124 ERCC6Q03468 1493 aa20.85■□□□□ 0.93
TRAF6-201ENST00000348124 IPO9Q96P70 1041 aaKnown RBP20.85■□□□□ 0.93
TRAF6-201ENST00000348124 SNAPC4Q5SXM2 1469 aa20.84■□□□□ 0.93
TRAF6-201ENST00000348124 L3MBTL2Q969R5 705 aa20.83■□□□□ 0.92
TRAF6-201ENST00000348124 AKNAQ7Z591 1439 aa20.82■□□□□ 0.92
TRAF6-201ENST00000348124 RTL5Q5HYW3 569 aaPredicted RBP20.82■□□□□ 0.92
TRAF6-201ENST00000348124 DENND4BO75064 1496 aaPredicted RBP20.82■□□□□ 0.92
TRAF6-201ENST00000348124 CCDC136Q96JN2 1154 aa20.82■□□□□ 0.92
TRAF6-201ENST00000348124 CHIC2Q9UKJ5 165 aa20.81■□□□□ 0.92
TRAF6-201ENST00000348124 TDRD9Q8NDG6 1382 aaKnown RBP20.81■□□□□ 0.92
TRAF6-201ENST00000348124 SMG6Q86US8 1419 aaKnown RBP20.8■□□□□ 0.92
TRAF6-201ENST00000348124 ZBTB47Q9UFB7 747 aaPredicted RBP20.8■□□□□ 0.92
TRAF6-201ENST00000348124 MRC2Q9UBG0 1479 aa20.78■□□□□ 0.92
TRAF6-201ENST00000348124 NUDCQ9Y266 331 aa20.76■□□□□ 0.91
TRAF6-201ENST00000348124 HECW1Q76N89 1606 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms