RNA–Protein interactions for RNA: ENST00000347616.5

CNTN1-201, Transcript of contactin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTN1, Length 5,507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1-201ENST00000347616 SETD5Q9C0A6 1442 aa6.36□□□□□ -1.39
CNTN1-201ENST00000347616 KCNH8Q96L42 1107 aa6.36□□□□□ -1.39
CNTN1-201ENST00000347616 CDK11AQ9UQ88 783 aaPredicted RBP6.36□□□□□ -1.39
CNTN1-201ENST00000347616 HNRNPUQ00839 825 aaKnown RBP eCLIP6.35□□□□□ -1.39
CNTN1-201ENST00000347616 TIMELESSQ9UNS1 1208 aa6.34□□□□□ -1.39
CNTN1-201ENST00000347616 CUX2O14529 1486 aa6.34□□□□□ -1.39
CNTN1-201ENST00000347616 ARAP1Q96P48 1450 aa6.34□□□□□ -1.39
CNTN1-201ENST00000347616 RRBP1Q9P2E9 1410 aaKnown RBP6.34□□□□□ -1.39
CNTN1-201ENST00000347616 ERICH3Q5RHP9 1530 aa6.34□□□□□ -1.39
CNTN1-201ENST00000347616 CARMIL1Q5VZK9 1371 aa6.33□□□□□ -1.4
CNTN1-201ENST00000347616 CC2D2AQ9P2K1 1620 aa6.33□□□□□ -1.4
CNTN1-201ENST00000347616 PRXQ9BXM0 1461 aa6.33□□□□□ -1.4
CNTN1-201ENST00000347616 FHAD1B1AJZ9 1412 aa6.33□□□□□ -1.4
CNTN1-201ENST00000347616 CCER2I3L3R5 266 aa6.32□□□□□ -1.4
CNTN1-201ENST00000347616 TOP2BQ02880 1626 aa6.32□□□□□ -1.4
CNTN1-201ENST00000347616 MTUS2Q5JR59 1369 aa6.32□□□□□ -1.4
CNTN1-201ENST00000347616 POLR3GLQ9BT43 218 aa6.32□□□□□ -1.4
CNTN1-201ENST00000347616 CNGB1Q14028 1251 aaPredicted RBP6.31□□□□□ -1.4
CNTN1-201ENST00000347616 PPP1R15AO75807 674 aaPredicted RBP6.31□□□□□ -1.4
CNTN1-201ENST00000347616 IRX6P78412 446 aaPredicted RBP6.3□□□□□ -1.4
CNTN1-201ENST00000347616 ARHGAP35Q9NRY4 1499 aa6.3□□□□□ -1.4
CNTN1-201ENST00000347616 RBM19Q9Y4C8 960 aaKnown RBP6.3□□□□□ -1.4
CNTN1-201ENST00000347616 CHIC2Q9UKJ5 165 aa6.28□□□□□ -1.4
CNTN1-201ENST00000347616 IGF1RP08069 1367 aa6.28□□□□□ -1.4
CNTN1-201ENST00000347616 FAM9BQ8IZU0 186 aa6.27□□□□□ -1.4
CNTN1-201ENST00000347616 EIF4G2P78344 907 aaKnown RBP eCLIP6.27□□□□□ -1.41
CNTN1-201ENST00000347616 RRP7BPQ9NSQ0 103 aa6.27□□□□□ -1.41
CNTN1-201ENST00000347616 PHLDB1Q86UU1 1377 aa6.27□□□□□ -1.41
CNTN1-201ENST00000347616 CUX1P39880 1505 aa6.26□□□□□ -1.41
CNTN1-201ENST00000347616 LRRC9Q6ZRR7 1453 aa6.26□□□□□ -1.41
CNTN1-201ENST00000347616 MRS2Q9HD23 443 aa6.26□□□□□ -1.41
CNTN1-201ENST00000347616 ARID3CA6NKF2 412 aa6.25□□□□□ -1.41
CNTN1-201ENST00000347616 FHOD3Q2V2M9 1422 aa6.25□□□□□ -1.41
CNTN1-201ENST00000347616 NCAPD3P42695 1498 aa6.25□□□□□ -1.41
CNTN1-201ENST00000347616 ZNF326Q5BKZ1 582 aaKnown RBP6.24□□□□□ -1.41
CNTN1-201ENST00000347616 BIVM-ERCC5R4GMW8 1640 aa6.24□□□□□ -1.41
CNTN1-201ENST00000347616 CADPSQ9ULU8 1353 aa6.24□□□□□ -1.41
CNTN1-201ENST00000347616 WDR97A6NE52 1622 aa6.23□□□□□ -1.41
CNTN1-201ENST00000347616 TIAM1Q13009 1591 aa6.23□□□□□ -1.41
CNTN1-201ENST00000347616 CFTRP13569 1480 aa6.23□□□□□ -1.41
CNTN1-201ENST00000347616 BCL11AQ9H165 835 aa6.23□□□□□ -1.41
CNTN1-201ENST00000347616 PPP4R2Q9NY27 417 aa6.23□□□□□ -1.41
CNTN1-201ENST00000347616 HSPA5P11021 654 aaKnown RBP6.22□□□□□ -1.41
CNTN1-201ENST00000347616 FMN1Q68DA7 1419 aa6.22□□□□□ -1.41
CNTN1-201ENST00000347616 RTL5Q5HYW3 569 aaPredicted RBP6.22□□□□□ -1.41
CNTN1-201ENST00000347616 FGD5Q6ZNL6 1462 aa6.21□□□□□ -1.41
CNTN1-201ENST00000347616 CCDC18Q5T9S5 1454 aa6.21□□□□□ -1.42
CNTN1-201ENST00000347616 MYT1LQ9UL68 1186 aa6.21□□□□□ -1.42
CNTN1-201ENST00000347616 MAPKBP1O60336 1514 aa6.2□□□□□ -1.42
CNTN1-201ENST00000347616 MAP3K1Q13233 1512 aa6.2□□□□□ -1.42
CNTN1-201ENST00000347616 ANP32AP39687 249 aaKnown RBP6.2□□□□□ -1.42
CNTN1-201ENST00000347616 ERICH6BQ5W0A0 696 aa6.2□□□□□ -1.42
CNTN1-201ENST00000347616 FGD6Q6ZV73 1430 aa6.19□□□□□ -1.42
CNTN1-201ENST00000347616 B4GALNT3Q6L9W6 998 aa6.19□□□□□ -1.42
CNTN1-201ENST00000347616 CCDC136Q96JN2 1154 aa6.19□□□□□ -1.42
CNTN1-201ENST00000347616 SLC4A1APQ9BWU0 796 aaKnown RBP6.19□□□□□ -1.42
CNTN1-201ENST00000347616 UACAQ9BZF9 1416 aa6.18□□□□□ -1.42
CNTN1-201ENST00000347616 CASKIN1Q8WXD9 1431 aa6.18□□□□□ -1.42
CNTN1-201ENST00000347616 KIF21AQ7Z4S6 1674 aa6.17□□□□□ -1.42
CNTN1-201ENST00000347616 FYCO1Q9BQS8 1478 aa6.17□□□□□ -1.42
CNTN1-201ENST00000347616 TMC1Q8TDI8 760 aa6.17□□□□□ -1.42
CNTN1-201ENST00000347616 ZNF777Q9ULD5 760 aaPredicted RBP6.17□□□□□ -1.42
CNTN1-201ENST00000347616 NBR1Q14596 966 aa6.17□□□□□ -1.42
CNTN1-201ENST00000347616 L3MBTL2Q969R5 705 aa6.17□□□□□ -1.42
CNTN1-201ENST00000347616 MPHOSPH9Q99550 1183 aa6.17□□□□□ -1.42
CNTN1-201ENST00000347616 FOXD1Q16676 465 aa6.17□□□□□ -1.42
CNTN1-201ENST00000347616 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.16□□□□□ -1.42
CNTN1-201ENST00000347616 FANCD2Q9BXW9 1451 aa6.16□□□□□ -1.42
CNTN1-201ENST00000347616 TDRD9Q8NDG6 1382 aaKnown RBP6.16□□□□□ -1.42
CNTN1-201ENST00000347616 FANCIQ9NVI1 1328 aa6.16□□□□□ -1.42
CNTN1-201ENST00000347616 RAD54L2Q9Y4B4 1467 aa6.16□□□□□ -1.42
CNTN1-201ENST00000347616 MSH5O43196 834 aa6.15□□□□□ -1.42
CNTN1-201ENST00000347616 PCF11O94913 1555 aaKnown RBP6.15□□□□□ -1.42
CNTN1-201ENST00000347616 PRKRIP1Q9H875 184 aaPredicted RBP6.15□□□□□ -1.42
CNTN1-201ENST00000347616 MYOM3Q5VTT5 1437 aa6.15□□□□□ -1.43
CNTN1-201ENST00000347616 WASHC2AQ641Q2 1341 aa6.15□□□□□ -1.43
CNTN1-201ENST00000347616 THOC2Q8NI27 1593 aaKnown RBP6.15□□□□□ -1.43
CNTN1-201ENST00000347616 DAXXQ9UER7 740 aaPredicted RBP6.15□□□□□ -1.43
CNTN1-201ENST00000347616 HFM1A2PYH4 1435 aa6.15□□□□□ -1.43
CNTN1-201ENST00000347616 ZBTB47Q9UFB7 747 aaPredicted RBP6.15□□□□□ -1.43
CNTN1-201ENST00000347616 SENP3-EIF4A1A0A087X0R7 540 aa6.14□□□□□ -1.43
CNTN1-201ENST00000347616 NPM2Q86SE8 214 aaKnown RBP6.14□□□□□ -1.43
CNTN1-201ENST00000347616 EFCAB5A4FU69 1503 aa6.14□□□□□ -1.43
CNTN1-201ENST00000347616 LAMC3Q9Y6N6 1575 aa6.14□□□□□ -1.43
CNTN1-201ENST00000347616 NOP58Q9Y2X3 529 aaKnown RBP6.14□□□□□ -1.43
CNTN1-201ENST00000347616 NCOA2Q15596 1464 aa6.13□□□□□ -1.43
CNTN1-201ENST00000347616 SALL2Q9Y467 1007 aaPredicted RBP6.13□□□□□ -1.43
CNTN1-201ENST00000347616 ZBED9Q6R2W3 1325 aa6.13□□□□□ -1.43
CNTN1-201ENST00000347616 NAIPQ13075 1403 aa6.12□□□□□ -1.43
CNTN1-201ENST00000347616 CNTLNQ9NXG0 1405 aa6.12□□□□□ -1.43
CNTN1-201ENST00000347616 KDM2AQ9Y2K7 1162 aa6.12□□□□□ -1.43
CNTN1-201ENST00000347616 AQRO60306 1485 aaKnown RBP eCLIP6.11□□□□□ -1.43
CNTN1-201ENST00000347616 CCDC7Q96M83 1385 aa6.11□□□□□ -1.43
CNTN1-201ENST00000347616 CFDP1Q9UEE9 299 aaPredicted RBP6.11□□□□□ -1.43
CNTN1-201ENST00000347616 DEKP35659 375 aaKnown RBP6.11□□□□□ -1.43
CNTN1-201ENST00000347616 FBLN2P98095 1184 aa6.11□□□□□ -1.43
CNTN1-201ENST00000347616 CCDC184Q52MB2 194 aa6.1□□□□□ -1.43
CNTN1-201ENST00000347616 CARD11Q9BXL7 1154 aa6.1□□□□□ -1.43
CNTN1-201ENST00000347616 NUDCQ9Y266 331 aa6.1□□□□□ -1.43
CNTN1-201ENST00000347616 POLA1P09884 1462 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms