RNA–Protein interactions for RNA: ENST00000347048.8

PTPA-202, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-202ENST00000347048 PDS5BQ9NTI5 1447 aa35.43■■■■□ 3.26
PTPA-202ENST00000347048 LRRC9Q6ZRR7 1453 aa35.4■■■■□ 3.26
PTPA-202ENST00000347048 CFAP43Q8NDM7 1665 aa35.39■■■■□ 3.26
PTPA-202ENST00000347048 ABCA10Q8WWZ4 1543 aa35.37■■■■□ 3.25
PTPA-202ENST00000347048 KIF21AQ7Z4S6 1674 aa35.36■■■■□ 3.25
PTPA-202ENST00000347048 YTHDC1Q96MU7 727 aaKnown RBP35.32■■■■□ 3.24
PTPA-202ENST00000347048 EFCAB5A4FU69 1503 aa35.31■■■■□ 3.24
PTPA-202ENST00000347048 CUL7Q14999 1698 aa35.3■■■■□ 3.24
PTPA-202ENST00000347048 TOPBP1Q92547 1522 aa35.28■■■■□ 3.24
PTPA-202ENST00000347048 PCF11O94913 1555 aaKnown RBP35.27■■■■□ 3.24
PTPA-202ENST00000347048 ERCC6Q03468 1493 aa35.26■■■■□ 3.24
PTPA-202ENST00000347048 RAB3GAP2Q9H2M9 1393 aa35.25■■■■□ 3.23
PTPA-202ENST00000347048 POLA1P09884 1462 aaPredicted RBP35.25■■■■□ 3.23
PTPA-202ENST00000347048 AQRO60306 1485 aaKnown RBP eCLIP35.21■■■■□ 3.232e-7■■■■□ 20.4
PTPA-202ENST00000347048 FYCO1Q9BQS8 1478 aa35.21■■■■□ 3.23
PTPA-202ENST00000347048 SETD5Q9C0A6 1442 aa35.2■■■■□ 3.23
PTPA-202ENST00000347048 PHLDB1Q86UU1 1377 aa35.19■■■■□ 3.22
PTPA-202ENST00000347048 RAD54L2Q9Y4B4 1467 aa35.18■■■■□ 3.22
PTPA-202ENST00000347048 CTTNBP2Q8WZ74 1663 aa35.17■■■■□ 3.22
PTPA-202ENST00000347048 MAPKBP1O60336 1514 aa35.17■■■■□ 3.22
PTPA-202ENST00000347048 ITGAEP38570 1179 aa35.16■■■■□ 3.22
PTPA-202ENST00000347048 CASKIN1Q8WXD9 1431 aa35.14■■■■□ 3.22
PTPA-202ENST00000347048 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.1■■■■□ 3.21
PTPA-202ENST00000347048 URB2Q14146 1524 aaKnown RBP35.09■■■■□ 3.21
PTPA-202ENST00000347048 WDR97A6NE52 1622 aa35.09■■■■□ 3.21
PTPA-202ENST00000347048 FHOD3Q2V2M9 1422 aa35.07■■■■□ 3.2
PTPA-202ENST00000347048 MRC2Q9UBG0 1479 aa35.04■■■■□ 3.2
PTPA-202ENST00000347048 FMN1Q68DA7 1419 aa35.02■■■■□ 3.2
PTPA-202ENST00000347048 THOC2Q8NI27 1593 aaKnown RBP34.97■■■■□ 3.19
PTPA-202ENST00000347048 FAM50AQ14320 339 aaKnown RBP34.96■■■■□ 3.19
PTPA-202ENST00000347048 P3H3Q8IVL6 736 aa34.96■■■■□ 3.19
PTPA-202ENST00000347048 ABCA5Q8WWZ7 1642 aa34.94■■■■□ 3.18
PTPA-202ENST00000347048 TIMELESSQ9UNS1 1208 aa34.93■■■■□ 3.18
PTPA-202ENST00000347048 SAMD9Q5K651 1589 aa34.89■■■■□ 3.18
PTPA-202ENST00000347048 SNAPC4Q5SXM2 1469 aa34.89■■■■□ 3.18
PTPA-202ENST00000347048 WDR62O43379 1518 aa34.88■■■■□ 3.17
PTPA-202ENST00000347048 ATP1B4Q9UN42 357 aaPredicted RBP34.86■■■■□ 3.17
PTPA-202ENST00000347048 FGD6Q6ZV73 1430 aa34.81■■■■□ 3.16
PTPA-202ENST00000347048 GAPVD1Q14C86 1478 aa34.79■■■■□ 3.16
PTPA-202ENST00000347048 GRIN2BQ13224 1484 aa34.72■■■■□ 3.15
PTPA-202ENST00000347048 MTUS2Q5JR59 1369 aa34.71■■■■□ 3.15
PTPA-202ENST00000347048 TDRD9Q8NDG6 1382 aaKnown RBP34.69■■■■□ 3.14
PTPA-202ENST00000347048 SIN3AQ96ST3 1273 aa34.67■■■■□ 3.14
PTPA-202ENST00000347048 LRRIQ1Q96JM4 1722 aa34.66■■■■□ 3.14
PTPA-202ENST00000347048 EHBP1L1Q8N3D4 1523 aa34.65■■■■□ 3.14
PTPA-202ENST00000347048 HFM1A2PYH4 1435 aa34.65■■■■□ 3.14
PTPA-202ENST00000347048 SUPT6HQ7KZ85 1726 aaKnown RBP34.64■■■■□ 3.14
PTPA-202ENST00000347048 CCDC18Q5T9S5 1454 aa34.61■■■■□ 3.13
PTPA-202ENST00000347048 MYOM3Q5VTT5 1437 aa34.61■■■■□ 3.13
PTPA-202ENST00000347048 NCOA2Q15596 1464 aa34.61■■■■□ 3.13
PTPA-202ENST00000347048 TARBP1Q13395 1621 aaKnown RBP34.6■■■■□ 3.13
PTPA-202ENST00000347048 PTPN23Q9H3S7 1636 aa34.59■■■■□ 3.13
PTPA-202ENST00000347048 UACAQ9BZF9 1416 aa34.58■■■■□ 3.13
PTPA-202ENST00000347048 PPP1R15AO75807 674 aaPredicted RBP34.56■■■■□ 3.12
PTPA-202ENST00000347048 ARHGEF11O15085 1522 aa34.52■■■■□ 3.12
PTPA-202ENST00000347048 UGGT2Q9NYU1 1516 aa34.51■■■■□ 3.12
PTPA-202ENST00000347048 PTPRKQ15262 1439 aa34.51■■■■□ 3.11
PTPA-202ENST00000347048 IFT140Q96RY7 1462 aa34.48■■■■□ 3.11
PTPA-202ENST00000347048 PBRM1Q86U86 1689 aa34.47■■■■□ 3.11
PTPA-202ENST00000347048 NAIPQ13075 1403 aa34.47■■■■□ 3.11
PTPA-202ENST00000347048 HECW1Q76N89 1606 aa34.45■■■■□ 3.11
PTPA-202ENST00000347048 SUPT16HQ9Y5B9 1047 aaKnown RBP34.45■■■■□ 3.11
PTPA-202ENST00000347048 TONSLQ96HA7 1378 aa34.44■■■■□ 3.1
PTPA-202ENST00000347048 ZNF608Q9ULD9 1512 aaPredicted RBP34.43■■■■□ 3.1
PTPA-202ENST00000347048 TCOF1Q13428 1488 aaKnown RBP34.41■■■■□ 3.1
PTPA-202ENST00000347048 DDX10Q13206 875 aaKnown RBP34.4■■■■□ 3.1
PTPA-202ENST00000347048 IQGAP2Q13576 1575 aa34.39■■■■□ 3.1
PTPA-202ENST00000347048 ADAMTS12P58397 1594 aa34.37■■■■□ 3.09
PTPA-202ENST00000347048 MAGI3Q5TCQ9 1506 aa34.36■■■■□ 3.09
PTPA-202ENST00000347048 AKNAQ7Z591 1439 aa34.35■■■■□ 3.09
PTPA-202ENST00000347048 GCC2Q8IWJ2 1684 aa34.34■■■■□ 3.09
PTPA-202ENST00000347048 MYT1Q01538 1121 aa34.32■■■■□ 3.09
PTPA-202ENST00000347048 CCER2I3L3R5 266 aa34.31■■■■□ 3.08
PTPA-202ENST00000347048 KCNH8Q96L42 1107 aa34.28■■■■□ 3.08
PTPA-202ENST00000347048 EPRSP07814 1512 aaKnown RBP34.28■■■■□ 3.08
PTPA-202ENST00000347048 MIA2Q96PC5 1412 aa34.26■■■■□ 3.08
PTPA-202ENST00000347048 EIF4G3O43432 1585 aaKnown RBP34.21■■■■□ 3.07
PTPA-202ENST00000347048 ANP32CO43423 234 aa34.21■■■■□ 3.07
PTPA-202ENST00000347048 KDM5BQ9UGL1 1544 aa34.2■■■■□ 3.07
PTPA-202ENST00000347048 CDK13Q14004 1512 aaKnown RBP34.1■■■■□ 3.05
PTPA-202ENST00000347048 HIRIP3Q9BW71 556 aaPredicted RBP34.1■■■■□ 3.05
PTPA-202ENST00000347048 RRP7BPQ9NSQ0 103 aa34.05■■■■□ 3.04
PTPA-202ENST00000347048 DENND4BO75064 1496 aaPredicted RBP34.05■■■■□ 3.04
PTPA-202ENST00000347048 KIAA0586Q9BVV6 1533 aa34.03■■■■□ 3.04
PTPA-202ENST00000347048 KIAA0556O60303 1618 aa34.02■■■■□ 3.04
PTPA-202ENST00000347048 ROCK1Q13464 1354 aa34.01■■■■□ 3.04
PTPA-202ENST00000347048 KDM6BO15054 1643 aa33.99■■■■□ 3.03
PTPA-202ENST00000347048 CHIC2Q9UKJ5 165 aa33.98■■■■□ 3.03
PTPA-202ENST00000347048 TRIM52Q96A61 297 aa33.95■■■■□ 3.03
PTPA-202ENST00000347048 DISP1Q96F81 1524 aa33.95■■■■□ 3.03
PTPA-202ENST00000347048 DNMT1P26358 1616 aaKnown RBP33.95■■■■□ 3.02
PTPA-202ENST00000347048 DAPK1P53355 1430 aa33.92■■■■□ 3.02
PTPA-202ENST00000347048 MPHOSPH9Q99550 1183 aa33.92■■■■□ 3.02
PTPA-202ENST00000347048 RAPGEF6Q8TEU7 1601 aa33.91■■■■□ 3.02
PTPA-202ENST00000347048 NUP153P49790 1475 aaKnown RBP33.88■■■■□ 3.01
PTPA-202ENST00000347048 GRIN2AQ12879 1464 aa33.86■■■■□ 3.01
PTPA-202ENST00000347048 MAGI1Q96QZ7 1491 aaPredicted RBP33.84■■■■□ 3.01
PTPA-202ENST00000347048 ABCC5O15440 1437 aa33.84■■■■□ 3.01
PTPA-202ENST00000347048 NEFLP07196 543 aa33.83■■■■□ 3.01
PTPA-202ENST00000347048 CDK11AQ9UQ88 783 aaPredicted RBP33.83■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms