RNA–Protein interactions for RNA: ENST00000346144.8

MADCAM1-202, Transcript of mucosal vascular addressin cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MADCAM1, Length 1,309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MADCAM1-202ENST00000346144 RIMBP3CA6NJZ7 1639 aa38.8■■■■□ 3.8
MADCAM1-202ENST00000346144 RIMBP3BA6NNM3 1639 aa38.8■■■■□ 3.8
MADCAM1-202ENST00000346144 RIMBP3Q9UFD9 1639 aa38.8■■■■□ 3.8
MADCAM1-202ENST00000346144 SHROOM2Q13796 1616 aa38.79■■■■□ 3.8
MADCAM1-202ENST00000346144 CTTNBP2Q8WZ74 1663 aa38.75■■■■□ 3.79
MADCAM1-202ENST00000346144 ARHGEF11O15085 1522 aa38.75■■■■□ 3.79
MADCAM1-202ENST00000346144 IQGAP2Q13576 1575 aa38.7■■■■□ 3.79
MADCAM1-202ENST00000346144 JPH4Q96JJ6 628 aa38.64■■■■□ 3.78
MADCAM1-202ENST00000346144 GOLGA3Q08378 1498 aa38.59■■■■□ 3.77
MADCAM1-202ENST00000346144 ERCC6L2Q5T890 1561 aa38.56■■■■□ 3.76
MADCAM1-202ENST00000346144 PRG4Q92954 1404 aaPredicted RBP38.55■■■■□ 3.76
MADCAM1-202ENST00000346144 UGGT2Q9NYU1 1516 aa38.5■■■■□ 3.75
MADCAM1-202ENST00000346144 ARAP1Q96P48 1450 aa38.46■■■■□ 3.75
MADCAM1-202ENST00000346144 EHMT2Q96KQ7 1210 aa38.42■■■■□ 3.74
MADCAM1-202ENST00000346144 CARMIL2Q6F5E8 1435 aa38.38■■■■□ 3.73
MADCAM1-202ENST00000346144 DISP1Q96F81 1524 aa38.38■■■■□ 3.73
MADCAM1-202ENST00000346144 UBTFP17480 764 aaKnown RBP38.38■■■■□ 3.73
MADCAM1-202ENST00000346144 KIAA0556O60303 1618 aa38.33■■■■□ 3.73
MADCAM1-202ENST00000346144 CYB5RLQ6IPT4 315 aa38.29■■■■□ 3.72
MADCAM1-202ENST00000346144 SAMD9Q5K651 1589 aa38.24■■■■□ 3.71
MADCAM1-202ENST00000346144 TNIKQ9UKE5 1360 aa38.22■■■■□ 3.71
MADCAM1-202ENST00000346144 PTPRGP23470 1445 aa38.15■■■■□ 3.7
MADCAM1-202ENST00000346144 EFCAB5A4FU69 1503 aa38.14■■■■□ 3.7
MADCAM1-202ENST00000346144 RANGAP1P46060 587 aaPredicted RBP38.12■■■■□ 3.69
MADCAM1-202ENST00000346144 TTBK1Q5TCY1 1321 aaPredicted RBP38.03■■■■□ 3.68
MADCAM1-202ENST00000346144 P3H3Q8IVL6 736 aa38.03■■■■□ 3.68
MADCAM1-202ENST00000346144 LOC105371045A0A1W2PR82 267 aa38.02■■■■□ 3.68
MADCAM1-202ENST00000346144 ARHGAP35Q9NRY4 1499 aa37.98■■■■□ 3.67
MADCAM1-202ENST00000346144 ADCY10Q96PN6 1610 aa37.97■■■■□ 3.67
MADCAM1-202ENST00000346144 FHOD3Q2V2M9 1422 aa37.96■■■■□ 3.67
MADCAM1-202ENST00000346144 UACAQ9BZF9 1416 aa37.93■■■■□ 3.66
MADCAM1-202ENST00000346144 UHRF1BP1LA0JNW5 1464 aa37.9■■■■□ 3.66
MADCAM1-202ENST00000346144 ABCC2Q92887 1545 aa37.88■■■■□ 3.66
MADCAM1-202ENST00000346144 CLIP1P30622 1438 aa37.88■■■■□ 3.65
MADCAM1-202ENST00000346144 ABCA8O94911 1581 aa37.88■■■■□ 3.65
MADCAM1-202ENST00000346144 PLB1Q6P1J6 1458 aa37.86■■■■□ 3.65
MADCAM1-202ENST00000346144 CEP162Q5TB80 1403 aa37.82■■■■□ 3.65
MADCAM1-202ENST00000346144 RAPGEF6Q8TEU7 1601 aa37.77■■■■□ 3.64
MADCAM1-202ENST00000346144 FMN1Q68DA7 1419 aa37.75■■■■□ 3.63
MADCAM1-202ENST00000346144 NPM1P06748 294 aaKnown RBP eCLIP37.72■■■■□ 3.63
MADCAM1-202ENST00000346144 KDM5BQ9UGL1 1544 aa37.71■■■■□ 3.63
MADCAM1-202ENST00000346144 ZCCHC11Q5TAX3 1644 aaKnown RBP37.67■■■■□ 3.62
MADCAM1-202ENST00000346144 MAPKBP1O60336 1514 aa37.64■■■■□ 3.62
MADCAM1-202ENST00000346144 NUP153P49790 1475 aaKnown RBP37.61■■■■□ 3.61
MADCAM1-202ENST00000346144 HECW1Q76N89 1606 aa37.56■■■■□ 3.6
MADCAM1-202ENST00000346144 TRHP20396 242 aaPredicted RBP37.56■■■■□ 3.6
MADCAM1-202ENST00000346144 PCF11O94913 1555 aaKnown RBP37.53■■■■□ 3.6
MADCAM1-202ENST00000346144 ATP10BO94823 1461 aa37.53■■■■□ 3.6
MADCAM1-202ENST00000346144 CASKIN1Q8WXD9 1431 aa37.5■■■■□ 3.59
MADCAM1-202ENST00000346144 ASXL2Q76L83 1435 aa37.49■■■■□ 3.59
MADCAM1-202ENST00000346144 FYCO1Q9BQS8 1478 aa37.46■■■■□ 3.59
MADCAM1-202ENST00000346144 ARID3CA6NKF2 412 aa37.46■■■■□ 3.59
MADCAM1-202ENST00000346144 LRRIQ1Q96JM4 1722 aa37.43■■■■□ 3.58
MADCAM1-202ENST00000346144 EPRSP07814 1512 aaKnown RBP37.41■■■■□ 3.58
MADCAM1-202ENST00000346144 ATP1B4Q9UN42 357 aaPredicted RBP37.4■■■■□ 3.58
MADCAM1-202ENST00000346144 CDK13Q14004 1512 aaKnown RBP37.39■■■■□ 3.58
MADCAM1-202ENST00000346144 ABCC10Q5T3U5 1492 aa37.38■■■■□ 3.57
MADCAM1-202ENST00000346144 WDR7Q9Y4E6 1490 aa37.38■■■■□ 3.57
MADCAM1-202ENST00000346144 KIF13AQ9H1H9 1805 aa37.37■■■■□ 3.57
MADCAM1-202ENST00000346144 DIP2BQ9P265 1576 aa37.37■■■■□ 3.57
MADCAM1-202ENST00000346144 VPS8Q8N3P4 1428 aa37.35■■■■□ 3.57
MADCAM1-202ENST00000346144 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.35■■■■□ 3.57
MADCAM1-202ENST00000346144 HNRNPUL2Q1KMD3 747 aaKnown RBP37.35■■■■□ 3.57
MADCAM1-202ENST00000346144 CCDC18Q5T9S5 1454 aa37.33■■■■□ 3.57
MADCAM1-202ENST00000346144 GLI2P10070 1586 aa37.25■■■■□ 3.55
MADCAM1-202ENST00000346144 FAM69CQ0P6D2 419 aa37.23■■■■□ 3.55
MADCAM1-202ENST00000346144 PLEKHD1A6NEE1 506 aa37.21■■■■□ 3.55
MADCAM1-202ENST00000346144 CDK11AQ9UQ88 783 aaPredicted RBP37.17■■■■□ 3.54
MADCAM1-202ENST00000346144 KCNH8Q96L42 1107 aa37.15■■■■□ 3.54
MADCAM1-202ENST00000346144 MAP3K4Q9Y6R4 1608 aa37.12■■■■□ 3.53
MADCAM1-202ENST00000346144 CFAP43Q8NDM7 1665 aa37.11■■■■□ 3.53
MADCAM1-202ENST00000346144 TROQ12816 1431 aaPredicted RBP37.09■■■■□ 3.53
MADCAM1-202ENST00000346144 ABCA9Q8IUA7 1624 aa37.08■■■■□ 3.53
MADCAM1-202ENST00000346144 MAGI3Q5TCQ9 1506 aa37.07■■■■□ 3.53
MADCAM1-202ENST00000346144 TIAM1Q13009 1591 aa37.05■■■■□ 3.52
MADCAM1-202ENST00000346144 TSPOAP1O95153 1857 aa37.04■■■■□ 3.52
MADCAM1-202ENST00000346144 KIF14Q15058 1648 aa37.02■■■■□ 3.52
MADCAM1-202ENST00000346144 MAP3K1Q13233 1512 aa37.02■■■■□ 3.52
MADCAM1-202ENST00000346144 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.99■■■■□ 3.51
MADCAM1-202ENST00000346144 PPRC1Q5VV67 1664 aaKnown RBP36.99■■■■□ 3.51
MADCAM1-202ENST00000346144 CD109Q6YHK3 1445 aa36.97■■■■□ 3.51
MADCAM1-202ENST00000346144 TTC37Q6PGP7 1564 aa36.95■■■■□ 3.51
MADCAM1-202ENST00000346144 EHBP1L1Q8N3D4 1523 aa36.94■■■■□ 3.5
MADCAM1-202ENST00000346144 MTUS2Q5JR59 1369 aa36.94■■■■□ 3.5
MADCAM1-202ENST00000346144 TEX14Q8IWB6 1497 aa36.87■■■■□ 3.49
MADCAM1-202ENST00000346144 APLP2Q06481 763 aa36.86■■■■□ 3.49
MADCAM1-202ENST00000346144 LRRC9Q6ZRR7 1453 aa36.86■■■■□ 3.49
MADCAM1-202ENST00000346144 MYO5CQ9NQX4 1742 aa36.84■■■■□ 3.49
MADCAM1-202ENST00000346144 SUPT6HQ7KZ85 1726 aaKnown RBP36.79■■■■□ 3.48
MADCAM1-202ENST00000346144 PLCH2O75038 1416 aa36.75■■■■□ 3.47
MADCAM1-202ENST00000346144 ARAP3Q8WWN8 1544 aa36.75■■■■□ 3.47
MADCAM1-202ENST00000346144 KANK4Q5T7N3 995 aaPredicted RBP36.75■■■■□ 3.47
MADCAM1-202ENST00000346144 CDC42BPAQ5VT25 1732 aa36.74■■■■□ 3.47
MADCAM1-202ENST00000346144 PREX2Q70Z35 1606 aa36.73■■■■□ 3.47
MADCAM1-202ENST00000346144 CFAP74Q9C0B2 1584 aa36.72■■■■□ 3.47
MADCAM1-202ENST00000346144 CDC42BPBQ9Y5S2 1711 aa36.7■■■■□ 3.47
MADCAM1-202ENST00000346144 NEO1Q92859 1461 aa36.7■■■■□ 3.47
MADCAM1-202ENST00000346144 FANCAO15360 1455 aa36.68■■■■□ 3.46
MADCAM1-202ENST00000346144 NCOA2Q15596 1464 aa36.68■■■■□ 3.46
MADCAM1-202ENST00000346144 KDM6BO15054 1643 aa36.65■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms