RNA–Protein interactions for RNA: ENST00000344956.8

PVR-202, Transcript of poliovirus receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PVR, Length 3,166 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVR-202ENST00000344956 TOPBP1Q92547 1522 aa22.13■■□□□ 1.13
PVR-202ENST00000344956 POLA1P09884 1462 aaPredicted RBP22.12■■□□□ 1.13
PVR-202ENST00000344956 ABCA10Q8WWZ4 1543 aa22.11■■□□□ 1.13
PVR-202ENST00000344956 LRRC9Q6ZRR7 1453 aa22.1■■□□□ 1.13
PVR-202ENST00000344956 FHAD1B1AJZ9 1412 aa22.08■■□□□ 1.13
PVR-202ENST00000344956 ATP1B4Q9UN42 357 aaPredicted RBP22.06■■□□□ 1.12
PVR-202ENST00000344956 PCF11O94913 1555 aaKnown RBP22.04■■□□□ 1.12
PVR-202ENST00000344956 PHLDB1Q86UU1 1377 aa22.04■■□□□ 1.12
PVR-202ENST00000344956 RAB3GAP2Q9H2M9 1393 aa22.04■■□□□ 1.12
PVR-202ENST00000344956 FHOD3Q2V2M9 1422 aa22.03■■□□□ 1.12
PVR-202ENST00000344956 PELP1Q8IZL8 1130 aaKnown RBP22.01■■□□□ 1.11
PVR-202ENST00000344956 CFAP43Q8NDM7 1665 aa22■■□□□ 1.11
PVR-202ENST00000344956 FAM50AQ14320 339 aaKnown RBP21.98■■□□□ 1.11
PVR-202ENST00000344956 CUL7Q14999 1698 aa21.98■■□□□ 1.11
PVR-202ENST00000344956 URB2Q14146 1524 aaKnown RBP21.96■■□□□ 1.11
PVR-202ENST00000344956 EFCAB5A4FU69 1503 aa21.95■■□□□ 1.1
PVR-202ENST00000344956 SETD5Q9C0A6 1442 aa21.95■■□□□ 1.1
PVR-202ENST00000344956 LAMC3Q9Y6N6 1575 aa21.95■■□□□ 1.1
PVR-202ENST00000344956 CTTNBP2Q8WZ74 1663 aa21.94■■□□□ 1.1
PVR-202ENST00000344956 FYCO1Q9BQS8 1478 aa21.93■■□□□ 1.1
PVR-202ENST00000344956 MAPKBP1O60336 1514 aa21.92■■□□□ 1.1
PVR-202ENST00000344956 CASKIN1Q8WXD9 1431 aa21.91■■□□□ 1.1
PVR-202ENST00000344956 TDRD9Q8NDG6 1382 aaKnown RBP21.9■■□□□ 1.1
PVR-202ENST00000344956 WDR97A6NE52 1622 aa21.9■■□□□ 1.1
PVR-202ENST00000344956 AQRO60306 1485 aaKnown RBP eCLIP21.88■■□□□ 1.097e-8■■■■■ 38.3
PVR-202ENST00000344956 DNAJC5BQ9UF47 199 aa21.85■■□□□ 1.09
PVR-202ENST00000344956 FMN1Q68DA7 1419 aa21.84■■□□□ 1.09
PVR-202ENST00000344956 ABCA5Q8WWZ7 1642 aa21.83■■□□□ 1.09
PVR-202ENST00000344956 GAPVD1Q14C86 1478 aa21.82■■□□□ 1.08
PVR-202ENST00000344956 PDS5BQ9NTI5 1447 aa21.82■■□□□ 1.08
PVR-202ENST00000344956 SNAPC4Q5SXM2 1469 aa21.8■■□□□ 1.08
PVR-202ENST00000344956 SIN3AQ96ST3 1273 aa21.79■■□□□ 1.08
PVR-202ENST00000344956 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.76■■□□□ 1.07
PVR-202ENST00000344956 KIF21AQ7Z4S6 1674 aa21.75■■□□□ 1.07
PVR-202ENST00000344956 SAMD9Q5K651 1589 aa21.75■■□□□ 1.07
PVR-202ENST00000344956 MTUS2Q5JR59 1369 aa21.75■■□□□ 1.07
PVR-202ENST00000344956 FGD6Q6ZV73 1430 aa21.74■■□□□ 1.07
PVR-202ENST00000344956 LRRIQ1Q96JM4 1722 aa21.7■■□□□ 1.06
PVR-202ENST00000344956 GRIN2BQ13224 1484 aa21.67■■□□□ 1.06
PVR-202ENST00000344956 TARBP1Q13395 1621 aaKnown RBP21.67■■□□□ 1.06
PVR-202ENST00000344956 NCOA2Q15596 1464 aa21.64■■□□□ 1.05
PVR-202ENST00000344956 PTPRKQ15262 1439 aa21.63■■□□□ 1.05
PVR-202ENST00000344956 TIMELESSQ9UNS1 1208 aa21.63■■□□□ 1.05
PVR-202ENST00000344956 MYOM3Q5VTT5 1437 aa21.6■■□□□ 1.05
PVR-202ENST00000344956 THOC2Q8NI27 1593 aaKnown RBP21.6■■□□□ 1.05
PVR-202ENST00000344956 CCDC18Q5T9S5 1454 aa21.6■■□□□ 1.05
PVR-202ENST00000344956 SUPT6HQ7KZ85 1726 aaKnown RBP21.58■■□□□ 1.05
PVR-202ENST00000344956 HFM1A2PYH4 1435 aa21.58■■□□□ 1.05
PVR-202ENST00000344956 PPP1R15AO75807 674 aaPredicted RBP21.58■■□□□ 1.05
PVR-202ENST00000344956 EHBP1L1Q8N3D4 1523 aa21.57■■□□□ 1.04
PVR-202ENST00000344956 PBRM1Q86U86 1689 aa21.57■■□□□ 1.04
PVR-202ENST00000344956 DDX10Q13206 875 aaKnown RBP21.56■■□□□ 1.04
PVR-202ENST00000344956 PTPN23Q9H3S7 1636 aa21.55■■□□□ 1.04
PVR-202ENST00000344956 KCNH8Q96L42 1107 aa21.55■■□□□ 1.04
PVR-202ENST00000344956 MAGI3Q5TCQ9 1506 aa21.54■■□□□ 1.04
PVR-202ENST00000344956 UACAQ9BZF9 1416 aa21.53■■□□□ 1.04
PVR-202ENST00000344956 NAIPQ13075 1403 aa21.53■■□□□ 1.04
PVR-202ENST00000344956 HIRIP3Q9BW71 556 aaPredicted RBP21.53■■□□□ 1.04
PVR-202ENST00000344956 UGGT2Q9NYU1 1516 aa21.52■■□□□ 1.04
PVR-202ENST00000344956 IQGAP2Q13576 1575 aa21.51■■□□□ 1.03
PVR-202ENST00000344956 TONSLQ96HA7 1378 aa21.5■■□□□ 1.03
PVR-202ENST00000344956 ADAMTS12P58397 1594 aa21.49■■□□□ 1.03
PVR-202ENST00000344956 ARHGEF11O15085 1522 aa21.49■■□□□ 1.03
PVR-202ENST00000344956 MRC2Q9UBG0 1479 aa21.48■■□□□ 1.03
PVR-202ENST00000344956 HECW1Q76N89 1606 aa21.47■■□□□ 1.03
PVR-202ENST00000344956 EPRSP07814 1512 aaKnown RBP21.45■■□□□ 1.02
PVR-202ENST00000344956 ARID3CA6NKF2 412 aa21.44■■□□□ 1.02
PVR-202ENST00000344956 RRP7BPQ9NSQ0 103 aa21.44■■□□□ 1.02
PVR-202ENST00000344956 CHIC2Q9UKJ5 165 aa21.44■■□□□ 1.02
PVR-202ENST00000344956 CDK13Q14004 1512 aaKnown RBP21.42■■□□□ 1.02
PVR-202ENST00000344956 SUPT16HQ9Y5B9 1047 aaKnown RBP21.41■■□□□ 1.02
PVR-202ENST00000344956 TCOF1Q13428 1488 aaKnown RBP21.41■■□□□ 1.02
PVR-202ENST00000344956 ZNF608Q9ULD9 1512 aaPredicted RBP21.4■■□□□ 1.02
PVR-202ENST00000344956 WDR62O43379 1518 aa21.38■■□□□ 1.01
PVR-202ENST00000344956 IFT140Q96RY7 1462 aa21.35■■□□□ 1.01
PVR-202ENST00000344956 TRIM52Q96A61 297 aa21.34■■□□□ 1.01
PVR-202ENST00000344956 GCC2Q8IWJ2 1684 aa21.33■■□□□ 1.01
PVR-202ENST00000344956 MIA2Q96PC5 1412 aa21.33■■□□□ 1
PVR-202ENST00000344956 KDM6BO15054 1643 aa21.31■■□□□ 1
PVR-202ENST00000344956 ANP32CO43423 234 aa21.31■■□□□ 1
PVR-202ENST00000344956 KDM5BQ9UGL1 1544 aa21.31■■□□□ 1
PVR-202ENST00000344956 DENND4BO75064 1496 aaPredicted RBP21.3■■□□□ 1
PVR-202ENST00000344956 KIAA0586Q9BVV6 1533 aa21.29■■□□□ 1
PVR-202ENST00000344956 AKNAQ7Z591 1439 aa21.29■■□□□ 1
PVR-202ENST00000344956 DISP1Q96F81 1524 aa21.28■■□□□ 1
PVR-202ENST00000344956 KIAA0556O60303 1618 aa21.27■■□□□ 1
PVR-202ENST00000344956 CCER2I3L3R5 266 aa21.26■□□□□ 0.99
PVR-202ENST00000344956 MPHOSPH9Q99550 1183 aa21.25■□□□□ 0.99
PVR-202ENST00000344956 GRIN2AQ12879 1464 aa21.23■□□□□ 0.99
PVR-202ENST00000344956 NUP153P49790 1475 aaKnown RBP21.23■□□□□ 0.99
PVR-202ENST00000344956 EIF4G3O43432 1585 aaKnown RBP21.22■□□□□ 0.99
PVR-202ENST00000344956 FOXD1Q16676 465 aa21.21■□□□□ 0.99
PVR-202ENST00000344956 ZNF644Q9H582 1327 aaPredicted RBP21.21■□□□□ 0.99
PVR-202ENST00000344956 DAPK1P53355 1430 aa21.2■□□□□ 0.98
PVR-202ENST00000344956 RAPGEF6Q8TEU7 1601 aa21.2■□□□□ 0.98
PVR-202ENST00000344956 CDK11AQ9UQ88 783 aaPredicted RBP21.18■□□□□ 0.98
PVR-202ENST00000344956 ABCC5O15440 1437 aa21.17■□□□□ 0.98
PVR-202ENST00000344956 HSPA5P11021 654 aaKnown RBP21.17■□□□□ 0.98
PVR-202ENST00000344956 ROCK1Q13464 1354 aa21.16■□□□□ 0.98
PVR-202ENST00000344956 DNMT1P26358 1616 aaKnown RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms