RNA–Protein interactions for RNA: ENST00000344222.5

ZNF550-202, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 3,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-202ENST00000344222 WIZO95785 1651 aa9.18□□□□□ -0.94
ZNF550-202ENST00000344222 PLCB2Q00722 1185 aa9.17□□□□□ -0.94
ZNF550-202ENST00000344222 LAMC3Q9Y6N6 1575 aa9.16□□□□□ -0.94
ZNF550-202ENST00000344222 MYT1LQ9UL68 1186 aa9.14□□□□□ -0.95
ZNF550-202ENST00000344222 DAXXQ9UER7 740 aaPredicted RBP9.13□□□□□ -0.95
ZNF550-202ENST00000344222 YTHDC1Q96MU7 727 aaKnown RBP9.11□□□□□ -0.95
ZNF550-202ENST00000344222 WDR62O43379 1518 aa9.1□□□□□ -0.95
ZNF550-202ENST00000344222 FBLN2P98095 1184 aa9.1□□□□□ -0.95
ZNF550-202ENST00000344222 CCER1Q8TC90 406 aaPredicted RBP9.1□□□□□ -0.95
ZNF550-202ENST00000344222 BAZ1BQ9UIG0 1483 aaKnown RBP9.1□□□□□ -0.95
ZNF550-202ENST00000344222 BIVM-ERCC5R4GMW8 1640 aa9.1□□□□□ -0.95
ZNF550-202ENST00000344222 TAOK2Q9UL54 1235 aa9.09□□□□□ -0.95
ZNF550-202ENST00000344222 TPRNQ4KMQ1 711 aa9.08□□□□□ -0.96
ZNF550-202ENST00000344222 RNF216Q9NWF9 866 aaPredicted RBP9.08□□□□□ -0.96
ZNF550-202ENST00000344222 DEKP35659 375 aaKnown RBP9.08□□□□□ -0.96
ZNF550-202ENST00000344222 KDM2AQ9Y2K7 1162 aa9.03□□□□□ -0.96
ZNF550-202ENST00000344222 KIF21BO75037 1637 aa9.03□□□□□ -0.96
ZNF550-202ENST00000344222 EIF5BO60841 1220 aaKnown RBP9.03□□□□□ -0.96
ZNF550-202ENST00000344222 OSCARQ8IYS5 282 aa9.02□□□□□ -0.97
ZNF550-202ENST00000344222 ARHGEF11O15085 1522 aa9.02□□□□□ -0.97
ZNF550-202ENST00000344222 EEA1Q15075 1411 aa9.02□□□□□ -0.97
ZNF550-202ENST00000344222 ILDR1Q86SU0 546 aaPredicted RBP9.01□□□□□ -0.97
ZNF550-202ENST00000344222 C11orf95C9JLR9 678 aaPredicted RBP9.01□□□□□ -0.97
ZNF550-202ENST00000344222 KIF21AQ7Z4S6 1674 aa9.01□□□□□ -0.97
ZNF550-202ENST00000344222 WASHC2AQ641Q2 1341 aa8.99□□□□□ -0.97
ZNF550-202ENST00000344222 MRC2Q9UBG0 1479 aa8.98□□□□□ -0.97
ZNF550-202ENST00000344222 CCDC136Q96JN2 1154 aa8.98□□□□□ -0.97
ZNF550-202ENST00000344222 ATAD2BQ9ULI0 1458 aa8.98□□□□□ -0.97
ZNF550-202ENST00000344222 MYCNP04198 464 aaPredicted RBP8.97□□□□□ -0.97
ZNF550-202ENST00000344222 PKNOX2Q96KN3 472 aa8.97□□□□□ -0.97
ZNF550-202ENST00000344222 PDS5BQ9NTI5 1447 aa8.97□□□□□ -0.97
ZNF550-202ENST00000344222 WASHC2CQ9Y4E1 1318 aa8.97□□□□□ -0.97
ZNF550-202ENST00000344222 CCDC88BA6NC98 1476 aa8.96□□□□□ -0.98
ZNF550-202ENST00000344222 TIMELESSQ9UNS1 1208 aa8.96□□□□□ -0.98
ZNF550-202ENST00000344222 TOP2BQ02880 1626 aa8.95□□□□□ -0.98
ZNF550-202ENST00000344222 PLEKHG5O94827 1062 aa8.95□□□□□ -0.98
ZNF550-202ENST00000344222 IL27Q8NEV9 243 aa8.95□□□□□ -0.98
ZNF550-202ENST00000344222 CEP162Q5TB80 1403 aa8.93□□□□□ -0.98
ZNF550-202ENST00000344222 ERCC6L2Q5T890 1561 aa8.92□□□□□ -0.98
ZNF550-202ENST00000344222 NESP48681 1621 aa8.92□□□□□ -0.98
ZNF550-202ENST00000344222 DHX57Q6P158 1386 aaKnown RBP8.91□□□□□ -0.98
ZNF550-202ENST00000344222 IFNLR1Q8IU57 520 aaPredicted RBP8.91□□□□□ -0.98
ZNF550-202ENST00000344222 KCNH8Q96L42 1107 aa8.9□□□□□ -0.98
ZNF550-202ENST00000344222 BCANQ96GW7 911 aa8.9□□□□□ -0.98
ZNF550-202ENST00000344222 MAPKBP1O60336 1514 aa8.9□□□□□ -0.98
ZNF550-202ENST00000344222 ERICH3Q5RHP9 1530 aa8.9□□□□□ -0.99
ZNF550-202ENST00000344222 TNIKQ9UKE5 1360 aa8.88□□□□□ -0.99
ZNF550-202ENST00000344222 PKD2Q13563 968 aa8.88□□□□□ -0.99
ZNF550-202ENST00000344222 TULP1O00294 542 aaPredicted RBP8.87□□□□□ -0.99
ZNF550-202ENST00000344222 HOXD11P31277 338 aaPredicted RBP8.87□□□□□ -0.99
ZNF550-202ENST00000344222 ARAP1Q96P48 1450 aa8.86□□□□□ -0.99
ZNF550-202ENST00000344222 NPM1P06748 294 aaKnown RBP eCLIP8.86□□□□□ -0.99
ZNF550-202ENST00000344222 DCAF8L1A6NGE4 600 aa8.85□□□□□ -0.99
ZNF550-202ENST00000344222 PAK3O75914 559 aaPredicted RBP8.84□□□□□ -0.99
ZNF550-202ENST00000344222 CFAP44Q96MT7 982 aa8.84□□□□□ -1
ZNF550-202ENST00000344222 SYNJ1O43426 1573 aa8.83□□□□□ -1
ZNF550-202ENST00000344222 ABCC8Q09428 1581 aa8.83□□□□□ -1
ZNF550-202ENST00000344222 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.81□□□□□ -1
ZNF550-202ENST00000344222 ATXN8OSP0DMR3 200 aa8.81□□□□□ -1
ZNF550-202ENST00000344222 DMRT2Q9Y5R5 561 aa8.8□□□□□ -1
ZNF550-202ENST00000344222 CFTRP13569 1480 aa8.8□□□□□ -1
ZNF550-202ENST00000344222 PAXIP1Q6ZW49 1069 aaPredicted RBP8.79□□□□□ -1
ZNF550-202ENST00000344222 PPP1R15AO75807 674 aaPredicted RBP8.78□□□□□ -1
ZNF550-202ENST00000344222 MAP3K1Q13233 1512 aa8.78□□□□□ -1
ZNF550-202ENST00000344222 PODXL2Q9NZ53 605 aa8.78□□□□□ -1
ZNF550-202ENST00000344222 VASPP50552 380 aaPredicted RBP8.77□□□□□ -1.01
ZNF550-202ENST00000344222 NOP58Q9Y2X3 529 aaKnown RBP8.77□□□□□ -1.01
ZNF550-202ENST00000344222 KDM5BQ9UGL1 1544 aa8.76□□□□□ -1.01
ZNF550-202ENST00000344222 ITGAEP38570 1179 aa8.76□□□□□ -1.01
ZNF550-202ENST00000344222 MKRN4PQ13434 485 aaPredicted RBP8.75□□□□□ -1.01
ZNF550-202ENST00000344222 RRBP1Q9P2E9 1410 aaKnown RBP8.75□□□□□ -1.01
ZNF550-202ENST00000344222 POLR1AO95602 1720 aaPredicted RBP8.74□□□□□ -1.01
ZNF550-202ENST00000344222 TARBP1Q13395 1621 aaKnown RBP8.74□□□□□ -1.01
ZNF550-202ENST00000344222 CCER2I3L3R5 266 aa8.74□□□□□ -1.01
ZNF550-202ENST00000344222 ZMYND15Q9H091 742 aa8.73□□□□□ -1.01
ZNF550-202ENST00000344222 PRXQ9BXM0 1461 aa8.72□□□□□ -1.01
ZNF550-202ENST00000344222 SPDYE4A6NLX3 237 aa8.72□□□□□ -1.01
ZNF550-202ENST00000344222 U3KPZ7 1027 aaPredicted RBP8.71□□□□□ -1.02
ZNF550-202ENST00000344222 ABCA5Q8WWZ7 1642 aa8.71□□□□□ -1.02
ZNF550-202ENST00000344222 CADPSQ9ULU8 1353 aa8.7□□□□□ -1.02
ZNF550-202ENST00000344222 DNMBPQ6XZF7 1577 aa8.7□□□□□ -1.02
ZNF550-202ENST00000344222 CLIP1P30622 1438 aa8.7□□□□□ -1.02
ZNF550-202ENST00000344222 CEP164Q9UPV0 1460 aa8.7□□□□□ -1.02
ZNF550-202ENST00000344222 VPS8Q8N3P4 1428 aa8.7□□□□□ -1.02
ZNF550-202ENST00000344222 CLASP1Q7Z460 1538 aa8.69□□□□□ -1.02
ZNF550-202ENST00000344222 GOLGA3Q08378 1498 aa8.69□□□□□ -1.02
ZNF550-202ENST00000344222 RNF123Q5XPI4 1314 aa8.69□□□□□ -1.02
ZNF550-202ENST00000344222 FBXO41Q8TF61 875 aa8.69□□□□□ -1.02
ZNF550-202ENST00000344222 SHROOM2Q13796 1616 aa8.69□□□□□ -1.02
ZNF550-202ENST00000344222 TRHP20396 242 aaPredicted RBP8.68□□□□□ -1.02
ZNF550-202ENST00000344222 VIRMAQ69YN4 1812 aaKnown RBP8.68□□□□□ -1.02
ZNF550-202ENST00000344222 RSPH6AQ9H0K4 717 aa8.68□□□□□ -1.02
ZNF550-202ENST00000344222 USP35Q9P2H5 1018 aa8.68□□□□□ -1.02
ZNF550-202ENST00000344222 CUX1P39880 1505 aa8.66□□□□□ -1.02
ZNF550-202ENST00000344222 IPO9Q96P70 1041 aaKnown RBP8.66□□□□□ -1.02
ZNF550-202ENST00000344222 IFT140Q96RY7 1462 aa8.66□□□□□ -1.02
ZNF550-202ENST00000344222 RUSC2Q8N2Y8 1516 aa8.66□□□□□ -1.02
ZNF550-202ENST00000344222 SOCS7O14512 581 aa8.66□□□□□ -1.02
ZNF550-202ENST00000344222 AAMPQ13685 434 aa8.66□□□□□ -1.02
ZNF550-202ENST00000344222 PRDM4Q9UKN5 801 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms