RNA–Protein interactions for RNA: ENST00000344129.2

CT55-202, Transcript of cancer/testis antigen 55, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CT55, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-202ENST00000344129 SYNJ2O15056 1496 aa20.19■□□□□ 0.82
CT55-202ENST00000344129 CHMP7Q8WUX9 453 aaPredicted RBP20.19■□□□□ 0.82
CT55-202ENST00000344129 GRIN2AQ12879 1464 aa20.17■□□□□ 0.82
CT55-202ENST00000344129 ARHGAP35Q9NRY4 1499 aa20.09■□□□□ 0.81
CT55-202ENST00000344129 ARAP1Q96P48 1450 aa20.07■□□□□ 0.8
CT55-202ENST00000344129 CEP170Q5SW79 1584 aa20.07■□□□□ 0.8
CT55-202ENST00000344129 CHD1O14646 1710 aa20.07■□□□□ 0.8
CT55-202ENST00000344129 P3H3Q8IVL6 736 aa20.05■□□□□ 0.8
CT55-202ENST00000344129 IQGAP2Q13576 1575 aa20.05■□□□□ 0.8
CT55-202ENST00000344129 KIAA0586Q9BVV6 1533 aa20.02■□□□□ 0.8
CT55-202ENST00000344129 NUP160Q12769 1436 aa20.02■□□□□ 0.8
CT55-202ENST00000344129 VPS8Q8N3P4 1428 aa20.01■□□□□ 0.79
CT55-202ENST00000344129 EFCAB5A4FU69 1503 aa19.99■□□□□ 0.79
CT55-202ENST00000344129 FHOD3Q2V2M9 1422 aa19.99■□□□□ 0.79
CT55-202ENST00000344129 SAMD9Q5K651 1589 aa19.97■□□□□ 0.79
CT55-202ENST00000344129 PPARGC1BQ86YN6 1023 aaKnown RBP19.94■□□□□ 0.78
CT55-202ENST00000344129 UGGT2Q9NYU1 1516 aa19.94■□□□□ 0.78
CT55-202ENST00000344129 JPH4Q96JJ6 628 aa19.88■□□□□ 0.77
CT55-202ENST00000344129 DISP1Q96F81 1524 aa19.87■□□□□ 0.77
CT55-202ENST00000344129 KIAA0556O60303 1618 aa19.86■□□□□ 0.77
CT55-202ENST00000344129 TTBK1Q5TCY1 1321 aaPredicted RBP19.84■□□□□ 0.77
CT55-202ENST00000344129 PCF11O94913 1555 aaKnown RBP19.83■□□□□ 0.76
CT55-202ENST00000344129 APLP2Q06481 763 aa19.82■□□□□ 0.76
CT55-202ENST00000344129 FMN1Q68DA7 1419 aa19.81■□□□□ 0.76
CT55-202ENST00000344129 ATP1B4Q9UN42 357 aaPredicted RBP19.81■□□□□ 0.76
CT55-202ENST00000344129 CLASP1Q7Z460 1538 aa19.81■□□□□ 0.76
CT55-202ENST00000344129 CARMIL2Q6F5E8 1435 aa19.79■□□□□ 0.76
CT55-202ENST00000344129 PRG4Q92954 1404 aaPredicted RBP19.79■□□□□ 0.76
CT55-202ENST00000344129 SHROOM2Q13796 1616 aa19.77■□□□□ 0.76
CT55-202ENST00000344129 CASKIN1Q8WXD9 1431 aa19.77■□□□□ 0.75
CT55-202ENST00000344129 FYCO1Q9BQS8 1478 aa19.75■□□□□ 0.75
CT55-202ENST00000344129 OSCARQ8IYS5 282 aa19.72■□□□□ 0.75
CT55-202ENST00000344129 ERCC6L2Q5T890 1561 aa19.72■□□□□ 0.75
CT55-202ENST00000344129 KANK4Q5T7N3 995 aaPredicted RBP19.71■□□□□ 0.75
CT55-202ENST00000344129 TIAM1Q13009 1591 aa19.69■□□□□ 0.74
CT55-202ENST00000344129 LRRIQ1Q96JM4 1722 aa19.67■□□□□ 0.74
CT55-202ENST00000344129 CFAP43Q8NDM7 1665 aa19.66■□□□□ 0.74
CT55-202ENST00000344129 HECW1Q76N89 1606 aa19.65■□□□□ 0.74
CT55-202ENST00000344129 ARID3CA6NKF2 412 aa19.65■□□□□ 0.74
CT55-202ENST00000344129 TRIM26Q12899 539 aaPredicted RBP19.65■□□□□ 0.74
CT55-202ENST00000344129 PCGF6Q9BYE7 350 aa19.65■□□□□ 0.74
CT55-202ENST00000344129 MAP3K1Q13233 1512 aa19.65■□□□□ 0.74
CT55-202ENST00000344129 RAPGEF6Q8TEU7 1601 aa19.64■□□□□ 0.73
CT55-202ENST00000344129 PLB1Q6P1J6 1458 aa19.64■□□□□ 0.73
CT55-202ENST00000344129 PTPRGP23470 1445 aa19.63■□□□□ 0.73
CT55-202ENST00000344129 LRRC9Q6ZRR7 1453 aa19.6■□□□□ 0.73
CT55-202ENST00000344129 EPRSP07814 1512 aaKnown RBP19.59■□□□□ 0.73
CT55-202ENST00000344129 CDK13Q14004 1512 aaKnown RBP19.59■□□□□ 0.73
CT55-202ENST00000344129 NUP153P49790 1475 aaKnown RBP19.59■□□□□ 0.73
CT55-202ENST00000344129 ABCA8O94911 1581 aa19.58■□□□□ 0.72
CT55-202ENST00000344129 CCDC18Q5T9S5 1454 aa19.57■□□□□ 0.72
CT55-202ENST00000344129 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.53■□□□□ 0.72
CT55-202ENST00000344129 HNRNPUL2Q1KMD3 747 aaKnown RBP19.53■□□□□ 0.72
CT55-202ENST00000344129 MTUS2Q5JR59 1369 aa19.52■□□□□ 0.72
CT55-202ENST00000344129 MAGI3Q5TCQ9 1506 aa19.52■□□□□ 0.71
CT55-202ENST00000344129 UACAQ9BZF9 1416 aa19.51■□□□□ 0.71
CT55-202ENST00000344129 EHBP1L1Q8N3D4 1523 aa19.47■□□□□ 0.71
CT55-202ENST00000344129 ATP10BO94823 1461 aa19.45■□□□□ 0.7
CT55-202ENST00000344129 ABCC2Q92887 1545 aa19.45■□□□□ 0.7
CT55-202ENST00000344129 PHLDB1Q86UU1 1377 aa19.44■□□□□ 0.7
CT55-202ENST00000344129 CDK11AQ9UQ88 783 aaPredicted RBP19.42■□□□□ 0.7
CT55-202ENST00000344129 SUPT6HQ7KZ85 1726 aaKnown RBP19.41■□□□□ 0.7
CT55-202ENST00000344129 ARHGEF11O15085 1522 aa19.4■□□□□ 0.7
CT55-202ENST00000344129 NCOA2Q15596 1464 aa19.4■□□□□ 0.7
CT55-202ENST00000344129 UHRF1BP1LA0JNW5 1464 aa19.39■□□□□ 0.69
CT55-202ENST00000344129 ADCY10Q96PN6 1610 aa19.38■□□□□ 0.69
CT55-202ENST00000344129 TROQ12816 1431 aaPredicted RBP19.36■□□□□ 0.69
CT55-202ENST00000344129 PLEKHD1A6NEE1 506 aa19.36■□□□□ 0.69
CT55-202ENST00000344129 RRBP1Q9P2E9 1410 aaKnown RBP19.36■□□□□ 0.69
CT55-202ENST00000344129 ZCCHC11Q5TAX3 1644 aaKnown RBP19.34■□□□□ 0.69
CT55-202ENST00000344129 RIMBP3CA6NJZ7 1639 aa19.34■□□□□ 0.69
CT55-202ENST00000344129 RIMBP3BA6NNM3 1639 aa19.34■□□□□ 0.69
CT55-202ENST00000344129 RIMBP3Q9UFD9 1639 aa19.34■□□□□ 0.69
CT55-202ENST00000344129 CCNB3Q8WWL7 1395 aa19.33■□□□□ 0.69
CT55-202ENST00000344129 KIF14Q15058 1648 aa19.32■□□□□ 0.68
CT55-202ENST00000344129 KDM5BQ9UGL1 1544 aa19.32■□□□□ 0.68
CT55-202ENST00000344129 MYOM3Q5VTT5 1437 aa19.3■□□□□ 0.68
CT55-202ENST00000344129 FGD6Q6ZV73 1430 aa19.28■□□□□ 0.68
CT55-202ENST00000344129 FAM50AQ14320 339 aaKnown RBP19.28■□□□□ 0.68
CT55-202ENST00000344129 CYB5RLQ6IPT4 315 aa19.26■□□□□ 0.67
CT55-202ENST00000344129 ITGAEP38570 1179 aa19.25■□□□□ 0.67
CT55-202ENST00000344129 KCNH8Q96L42 1107 aa19.23■□□□□ 0.67
CT55-202ENST00000344129 PTPN23Q9H3S7 1636 aa19.21■□□□□ 0.67
CT55-202ENST00000344129 ABCC10Q5T3U5 1492 aa19.21■□□□□ 0.67
CT55-202ENST00000344129 NPM1P06748 294 aaKnown RBP eCLIP19.21■□□□□ 0.67
CT55-202ENST00000344129 GPATCH8Q9UKJ3 1502 aaKnown RBP19.19■□□□□ 0.66
CT55-202ENST00000344129 MIA2Q96PC5 1412 aa19.18■□□□□ 0.66
CT55-202ENST00000344129 ITSN2Q9NZM3 1697 aa19.17■□□□□ 0.66
CT55-202ENST00000344129 WDR7Q9Y4E6 1490 aa19.17■□□□□ 0.66
CT55-202ENST00000344129 ASXL2Q76L83 1435 aa19.17■□□□□ 0.66
CT55-202ENST00000344129 TTC37Q6PGP7 1564 aa19.16■□□□□ 0.66
CT55-202ENST00000344129 CDC42BPAQ5VT25 1732 aa19.16■□□□□ 0.66
CT55-202ENST00000344129 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.16■□□□□ 0.66
CT55-202ENST00000344129 CFDP1Q9UEE9 299 aaPredicted RBP19.16■□□□□ 0.66
CT55-202ENST00000344129 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.16■□□□□ 0.66
CT55-202ENST00000344129 TCOF1Q13428 1488 aaKnown RBP19.15■□□□□ 0.66
CT55-202ENST00000344129 ZNF644Q9H582 1327 aaPredicted RBP19.15■□□□□ 0.66
CT55-202ENST00000344129 ZNF777Q9ULD5 760 aaPredicted RBP19.14■□□□□ 0.65
CT55-202ENST00000344129 CAMSAP2Q08AD1 1489 aa19.1■□□□□ 0.65
CT55-202ENST00000344129 PREX2Q70Z35 1606 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms