RNA–Protein interactions for RNA: ENST00000343638.9

UBTF-202, Transcript of upstream binding transcription factor, humanhuman

TSL 1 (best) BASIC

Gene UBTF, Length 4,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTF-202ENST00000343638 CFDP1Q9UEE9 299 aaPredicted RBP26.45■■□□□ 1.82
UBTF-202ENST00000343638 FGD5Q6ZNL6 1462 aa26.43■■□□□ 1.82
UBTF-202ENST00000343638 KCNH8Q96L42 1107 aa26.42■■□□□ 1.82
UBTF-202ENST00000343638 SLC4A1APQ9BWU0 796 aaKnown RBP26.41■■□□□ 1.82
UBTF-202ENST00000343638 IGF1RP08069 1367 aa26.41■■□□□ 1.82
UBTF-202ENST00000343638 FMN1Q68DA7 1419 aa26.37■■□□□ 1.81
UBTF-202ENST00000343638 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.36■■□□□ 1.816e-7■■■■□ 22.7
UBTF-202ENST00000343638 CC2D2AQ9P2K1 1620 aa26.34■■□□□ 1.81
UBTF-202ENST00000343638 SYNJ1O43426 1573 aa26.33■■□□□ 1.81
UBTF-202ENST00000343638 UNC13AQ9UPW8 1703 aa26.31■■□□□ 1.8
UBTF-202ENST00000343638 DDX10Q13206 875 aaKnown RBP26.31■■□□□ 1.8
UBTF-202ENST00000343638 CLSPNQ9HAW4 1339 aa26.3■■□□□ 1.8
UBTF-202ENST00000343638 RAD54L2Q9Y4B4 1467 aa26.3■■□□□ 1.8
UBTF-202ENST00000343638 FHOD3Q2V2M9 1422 aa26.3■■□□□ 1.8
UBTF-202ENST00000343638 ACIN1Q9UKV3 1341 aaKnown RBP26.28■■□□□ 1.8
UBTF-202ENST00000343638 CARMIL2Q6F5E8 1435 aa26.24■■□□□ 1.79
UBTF-202ENST00000343638 ARHGAP35Q9NRY4 1499 aa26.24■■□□□ 1.79
UBTF-202ENST00000343638 GTF3C3Q9Y5Q9 886 aa26.22■■□□□ 1.79
UBTF-202ENST00000343638 PEG3Q9GZU2 1588 aa26.22■■□□□ 1.79
UBTF-202ENST00000343638 NESP48681 1621 aa26.2■■□□□ 1.79
UBTF-202ENST00000343638 GAPVD1Q14C86 1478 aa26.2■■□□□ 1.78
UBTF-202ENST00000343638 SIN3AQ96ST3 1273 aa26.16■■□□□ 1.78
UBTF-202ENST00000343638 ERICH6Q7L0X2 663 aa26.15■■□□□ 1.78
UBTF-202ENST00000343638 TOP2BQ02880 1626 aa26.15■■□□□ 1.78
UBTF-202ENST00000343638 HIRIP3Q9BW71 556 aaPredicted RBP26.14■■□□□ 1.78
UBTF-202ENST00000343638 CHGAP10645 457 aaKnown RBP26.13■■□□□ 1.77
UBTF-202ENST00000343638 KDM2AQ9Y2K7 1162 aa26.13■■□□□ 1.77
UBTF-202ENST00000343638 SETD5Q9C0A6 1442 aa26.13■■□□□ 1.77
UBTF-202ENST00000343638 JPH4Q96JJ6 628 aa26.12■■□□□ 1.77
UBTF-202ENST00000343638 CUX1P39880 1505 aa26.12■■□□□ 1.77
UBTF-202ENST00000343638 MIER1Q8N108 512 aa26.1■■□□□ 1.77
UBTF-202ENST00000343638 KIF21BO75037 1637 aa26.09■■□□□ 1.77
UBTF-202ENST00000343638 EIF4G2P78344 907 aaKnown RBP eCLIP26.07■■□□□ 1.761e-13■■■■■ 28.6
UBTF-202ENST00000343638 ESF1Q9H501 851 aaKnown RBP26.05■■□□□ 1.76
UBTF-202ENST00000343638 PRXQ9BXM0 1461 aa26.03■■□□□ 1.76
UBTF-202ENST00000343638 ERICH3Q5RHP9 1530 aa26.03■■□□□ 1.76
UBTF-202ENST00000343638 RAB3GAP2Q9H2M9 1393 aa26.01■■□□□ 1.75
UBTF-202ENST00000343638 TOPBP1Q92547 1522 aa26■■□□□ 1.75
UBTF-202ENST00000343638 AQRO60306 1485 aaKnown RBP eCLIP26■■□□□ 1.752e-7■■■■■ 30.7
UBTF-202ENST00000343638 TIMELESSQ9UNS1 1208 aa25.97■■□□□ 1.75
UBTF-202ENST00000343638 DNAJC5BQ9UF47 199 aa25.96■■□□□ 1.75
UBTF-202ENST00000343638 POLA1P09884 1462 aaPredicted RBP25.96■■□□□ 1.75
UBTF-202ENST00000343638 BCANQ96GW7 911 aa25.96■■□□□ 1.75
UBTF-202ENST00000343638 STAG3Q9UJ98 1225 aa25.94■■□□□ 1.74
UBTF-202ENST00000343638 RGL3Q3MIN7 710 aa25.93■■□□□ 1.74
UBTF-202ENST00000343638 CCDC18Q5T9S5 1454 aa25.87■■□□□ 1.73
UBTF-202ENST00000343638 ARAP1Q96P48 1450 aa25.87■■□□□ 1.73
UBTF-202ENST00000343638 MRC2Q9UBG0 1479 aa25.85■■□□□ 1.73
UBTF-202ENST00000343638 DNMBPQ6XZF7 1577 aa25.85■■□□□ 1.73
UBTF-202ENST00000343638 GRIN2BQ13224 1484 aa25.84■■□□□ 1.73
UBTF-202ENST00000343638 HNRNPUQ00839 825 aaKnown RBP eCLIP25.84■■□□□ 1.73
UBTF-202ENST00000343638 FAM9BQ8IZU0 186 aa25.82■■□□□ 1.72
UBTF-202ENST00000343638 LAMC3Q9Y6N6 1575 aa25.78■■□□□ 1.72
UBTF-202ENST00000343638 EFCAB2Q5VUJ9 269 aa25.77■■□□□ 1.72
UBTF-202ENST00000343638 PTPRGP23470 1445 aa25.77■■□□□ 1.72
UBTF-202ENST00000343638 MPHOSPH9Q99550 1183 aa25.76■■□□□ 1.72
UBTF-202ENST00000343638 MRS2Q9HD23 443 aa25.75■■□□□ 1.71
UBTF-202ENST00000343638 TMC1Q8TDI8 760 aa25.75■■□□□ 1.71
UBTF-202ENST00000343638 FOXD1Q16676 465 aa25.74■■□□□ 1.71
UBTF-202ENST00000343638 CARD11Q9BXL7 1154 aa25.74■■□□□ 1.71
UBTF-202ENST00000343638 PKD2Q13563 968 aa25.73■■□□□ 1.71
UBTF-202ENST00000343638 ANKRD30AQ9BXX3 1397 aa25.73■■□□□ 1.71
UBTF-202ENST00000343638 DHX57Q6P158 1386 aaKnown RBP25.73■■□□□ 1.71
UBTF-202ENST00000343638 IFT140Q96RY7 1462 aa25.72■■□□□ 1.71
UBTF-202ENST00000343638 ABCA10Q8WWZ4 1543 aa25.72■■□□□ 1.71
UBTF-202ENST00000343638 CASKIN1Q8WXD9 1431 aa25.72■■□□□ 1.71
UBTF-202ENST00000343638 LRRC9Q6ZRR7 1453 aa25.7■■□□□ 1.71
UBTF-202ENST00000343638 HNRNPMP52272 730 aaKnown RBP eCLIP25.69■■□□□ 1.7
UBTF-202ENST00000343638 PHLDB1Q86UU1 1377 aa25.68■■□□□ 1.7
UBTF-202ENST00000343638 PLPPR3Q6T4P5 718 aa25.67■■□□□ 1.7
UBTF-202ENST00000343638 RSPH4AQ5TD94 716 aa25.66■■□□□ 1.7
UBTF-202ENST00000343638 NUP155O75694 1391 aa25.65■■□□□ 1.7
UBTF-202ENST00000343638 PPP1R15AO75807 674 aaPredicted RBP25.64■■□□□ 1.7
UBTF-202ENST00000343638 DCAF11Q8TEB1 546 aa25.64■■□□□ 1.69
UBTF-202ENST00000343638 FGD6Q6ZV73 1430 aa25.61■■□□□ 1.69
UBTF-202ENST00000343638 EFCAB5A4FU69 1503 aa25.59■■□□□ 1.69
UBTF-202ENST00000343638 FKBP8Q14318 412 aa25.59■■□□□ 1.69
UBTF-202ENST00000343638 FYCO1Q9BQS8 1478 aa25.59■■□□□ 1.69
UBTF-202ENST00000343638 BIVM-ERCC5R4GMW8 1640 aa25.58■■□□□ 1.69
UBTF-202ENST00000343638 NEFMP07197 916 aa25.58■■□□□ 1.69
UBTF-202ENST00000343638 MYOM3Q5VTT5 1437 aa25.58■■□□□ 1.68
UBTF-202ENST00000343638 KANK1Q14678 1352 aa25.56■■□□□ 1.68
UBTF-202ENST00000343638 DAXXQ9UER7 740 aaPredicted RBP25.54■■□□□ 1.68
UBTF-202ENST00000343638 SALL2Q9Y467 1007 aaPredicted RBP25.54■■□□□ 1.68
UBTF-202ENST00000343638 URB2Q14146 1524 aaKnown RBP25.53■■□□□ 1.68
UBTF-202ENST00000343638 HSPA5P11021 654 aaKnown RBP25.52■■□□□ 1.68
UBTF-202ENST00000343638 SENP3Q9H4L4 574 aaPredicted RBP25.51■■□□□ 1.67
UBTF-202ENST00000343638 L3MBTL2Q969R5 705 aa25.51■■□□□ 1.67
UBTF-202ENST00000343638 RRBP1Q9P2E9 1410 aaKnown RBP25.5■■□□□ 1.67
UBTF-202ENST00000343638 CDCA8Q53HL2 280 aa25.5■■□□□ 1.67
UBTF-202ENST00000343638 SNAPC4Q5SXM2 1469 aa25.5■■□□□ 1.67
UBTF-202ENST00000343638 OSCARQ8IYS5 282 aa25.49■■□□□ 1.67
UBTF-202ENST00000343638 NCOA2Q15596 1464 aa25.49■■□□□ 1.67
UBTF-202ENST00000343638 ZNF644Q9H582 1327 aaPredicted RBP25.48■■□□□ 1.67
UBTF-202ENST00000343638 SCAF1Q9H7N4 1312 aaKnown RBP25.47■■□□□ 1.67
UBTF-202ENST00000343638 SPAG9O60271 1321 aaKnown RBP25.47■■□□□ 1.67
UBTF-202ENST00000343638 GGT6Q6P531 493 aa25.46■■□□□ 1.67
UBTF-202ENST00000343638 ARID4BQ4LE39 1312 aaPredicted RBP25.46■■□□□ 1.67
UBTF-202ENST00000343638 WDR43Q15061 677 aaKnown RBP eCLIP25.45■■□□□ 1.66
UBTF-202ENST00000343638 CANXP27824 592 aaKnown RBP25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms