RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 PEG3Q9GZU2 1588 aa18.74■□□□□ 0.59
TMEM248-201ENST00000341567 KDM2AQ9Y2K7 1162 aa18.74■□□□□ 0.59
TMEM248-201ENST00000341567 DAXXQ9UER7 740 aaPredicted RBP18.73■□□□□ 0.59
TMEM248-201ENST00000341567 KCNH8Q96L42 1107 aa18.73■□□□□ 0.59
TMEM248-201ENST00000341567 CARMIL1Q5VZK9 1371 aa18.7■□□□□ 0.58
TMEM248-201ENST00000341567 NCAPD3P42695 1498 aa18.7■□□□□ 0.58
TMEM248-201ENST00000341567 TDRD9Q8NDG6 1382 aaKnown RBP18.69■□□□□ 0.58
TMEM248-201ENST00000341567 SALL2Q9Y467 1007 aaPredicted RBP18.69■□□□□ 0.58
TMEM248-201ENST00000341567 FAM9BQ8IZU0 186 aa18.67■□□□□ 0.58
TMEM248-201ENST00000341567 IRX6P78412 446 aaPredicted RBP18.66■□□□□ 0.58
TMEM248-201ENST00000341567 CHGAP10645 457 aaKnown RBP18.66■□□□□ 0.58
TMEM248-201ENST00000341567 HNRNPUQ00839 825 aaKnown RBP eCLIP18.64■□□□□ 0.57
TMEM248-201ENST00000341567 PLPPR3Q6T4P5 718 aa18.61■□□□□ 0.57
TMEM248-201ENST00000341567 HMGXB3Q12766 1538 aa18.61■□□□□ 0.57
TMEM248-201ENST00000341567 CC2D2AQ9P2K1 1620 aa18.61■□□□□ 0.57
TMEM248-201ENST00000341567 TSPY4P0CV99 314 aa18.6■□□□□ 0.57
TMEM248-201ENST00000341567 TSPY10P0CW01 314 aa18.6■□□□□ 0.57
TMEM248-201ENST00000341567 RAPGEF2Q9Y4G8 1499 aa18.58■□□□□ 0.57
TMEM248-201ENST00000341567 RGL3Q3MIN7 710 aa18.57■□□□□ 0.56
TMEM248-201ENST00000341567 CLSPNQ9HAW4 1339 aa18.56■□□□□ 0.56
TMEM248-201ENST00000341567 VPS8Q8N3P4 1428 aa18.54■□□□□ 0.56
TMEM248-201ENST00000341567 CFDP1Q9UEE9 299 aaPredicted RBP18.53■□□□□ 0.56
TMEM248-201ENST00000341567 SUPT16HQ9Y5B9 1047 aaKnown RBP18.53■□□□□ 0.56
TMEM248-201ENST00000341567 CCNB3Q8WWL7 1395 aa18.53■□□□□ 0.56
TMEM248-201ENST00000341567 PLEKHD1A6NEE1 506 aa18.53■□□□□ 0.56
TMEM248-201ENST00000341567 BCL11AQ9H165 835 aa18.52■□□□□ 0.56
TMEM248-201ENST00000341567 FOXD1Q16676 465 aa18.52■□□□□ 0.55
TMEM248-201ENST00000341567 NPM2Q86SE8 214 aaKnown RBP18.5■□□□□ 0.55
TMEM248-201ENST00000341567 ANP32EQ9BTT0 268 aa18.48■□□□□ 0.55
TMEM248-201ENST00000341567 NBR1Q14596 966 aa18.47■□□□□ 0.55
TMEM248-201ENST00000341567 CADPSQ9ULU8 1353 aa18.47■□□□□ 0.55
TMEM248-201ENST00000341567 ERCC6Q03468 1493 aa18.46■□□□□ 0.55
TMEM248-201ENST00000341567 NPM1P06748 294 aaKnown RBP eCLIP18.45■□□□□ 0.54
TMEM248-201ENST00000341567 MRS2Q9HD23 443 aa18.44■□□□□ 0.54
TMEM248-201ENST00000341567 EIF4G2P78344 907 aaKnown RBP eCLIP18.41■□□□□ 0.54
TMEM248-201ENST00000341567 FHOD3Q2V2M9 1422 aa18.39■□□□□ 0.53
TMEM248-201ENST00000341567 ANP32AP39687 249 aaKnown RBP18.38■□□□□ 0.53
TMEM248-201ENST00000341567 TMC1Q8TDI8 760 aa18.37■□□□□ 0.53
TMEM248-201ENST00000341567 RAB3GAP2Q9H2M9 1393 aa18.32■□□□□ 0.52
TMEM248-201ENST00000341567 FHAD1B1AJZ9 1412 aa18.32■□□□□ 0.52
TMEM248-201ENST00000341567 DNAJC5BQ9UF47 199 aa18.31■□□□□ 0.52
TMEM248-201ENST00000341567 STAG3Q9UJ98 1225 aa18.31■□□□□ 0.52
TMEM248-201ENST00000341567 CFTRP13569 1480 aa18.28■□□□□ 0.52
TMEM248-201ENST00000341567 SLC24A1O60721 1099 aa18.28■□□□□ 0.52
TMEM248-201ENST00000341567 CCDC136Q96JN2 1154 aa18.26■□□□□ 0.51
TMEM248-201ENST00000341567 PDS5BQ9NTI5 1447 aa18.26■□□□□ 0.51
TMEM248-201ENST00000341567 RAD54L2Q9Y4B4 1467 aa18.25■□□□□ 0.51
TMEM248-201ENST00000341567 TSHZ2Q9NRE2 1034 aa18.24■□□□□ 0.51
TMEM248-201ENST00000341567 IGF1RP08069 1367 aa18.24■□□□□ 0.51
TMEM248-201ENST00000341567 SETD5Q9C0A6 1442 aa18.23■□□□□ 0.51
TMEM248-201ENST00000341567 CANXP27824 592 aaKnown RBP18.23■□□□□ 0.51
TMEM248-201ENST00000341567 CARD11Q9BXL7 1154 aa18.23■□□□□ 0.51
TMEM248-201ENST00000341567 FANCD2Q9BXW9 1451 aa18.23■□□□□ 0.51
TMEM248-201ENST00000341567 EIF5BO60841 1220 aaKnown RBP18.22■□□□□ 0.51
TMEM248-201ENST00000341567 ESF1Q9H501 851 aaKnown RBP18.22■□□□□ 0.51
TMEM248-201ENST00000341567 DCAF11Q8TEB1 546 aa18.19■□□□□ 0.5
TMEM248-201ENST00000341567 RBM19Q9Y4C8 960 aaKnown RBP18.19■□□□□ 0.5
TMEM248-201ENST00000341567 ZBTB47Q9UFB7 747 aaPredicted RBP18.18■□□□□ 0.5
TMEM248-201ENST00000341567 ARHGAP35Q9NRY4 1499 aa18.17■□□□□ 0.5
TMEM248-201ENST00000341567 PLEKHG5O94827 1062 aa18.17■□□□□ 0.5
TMEM248-201ENST00000341567 PKD2Q13563 968 aa18.16■□□□□ 0.5
TMEM248-201ENST00000341567 FGD5Q6ZNL6 1462 aa18.14■□□□□ 0.49
TMEM248-201ENST00000341567 HSPA5P11021 654 aaKnown RBP18.13■□□□□ 0.49
TMEM248-201ENST00000341567 MPHOSPH9Q99550 1183 aa18.13■□□□□ 0.49
TMEM248-201ENST00000341567 JPH4Q96JJ6 628 aa18.13■□□□□ 0.49
TMEM248-201ENST00000341567 HNRNPMP52272 730 aaKnown RBP eCLIP18.12■□□□□ 0.491e-6■■■■■ 30.8
TMEM248-201ENST00000341567 NESP48681 1621 aa18.12■□□□□ 0.49
TMEM248-201ENST00000341567 B4GALNT3Q6L9W6 998 aa18.12■□□□□ 0.49
TMEM248-201ENST00000341567 DHX57Q6P158 1386 aaKnown RBP18.11■□□□□ 0.49
TMEM248-201ENST00000341567 SYNJ1O43426 1573 aa18.1■□□□□ 0.49
TMEM248-201ENST00000341567 PPP1R15AO75807 674 aaPredicted RBP18.09■□□□□ 0.49
TMEM248-201ENST00000341567 L3MBTL2Q969R5 705 aa18.09■□□□□ 0.49
TMEM248-201ENST00000341567 FMN1Q68DA7 1419 aa18.08■□□□□ 0.49
TMEM248-201ENST00000341567 TNNT2P45379 298 aaPredicted RBP18.07■□□□□ 0.48
TMEM248-201ENST00000341567 CC2D1BQ5T0F9 858 aaKnown RBP18.07■□□□□ 0.48
TMEM248-201ENST00000341567 ZNF644Q9H582 1327 aaPredicted RBP18.07■□□□□ 0.48
TMEM248-201ENST00000341567 LAMC3Q9Y6N6 1575 aa18.06■□□□□ 0.48
TMEM248-201ENST00000341567 WDR43Q15061 677 aaKnown RBP eCLIP18.06■□□□□ 0.48
TMEM248-201ENST00000341567 AQRO60306 1485 aaKnown RBP eCLIP18.04■□□□□ 0.482e-6■□□□□ 11.3
TMEM248-201ENST00000341567 RTN4Q9NQC3 1192 aaKnown RBP18.03■□□□□ 0.48
TMEM248-201ENST00000341567 NEUROD2Q15784 382 aa18.02■□□□□ 0.48
TMEM248-201ENST00000341567 GGT6Q6P531 493 aa18.02■□□□□ 0.48
TMEM248-201ENST00000341567 ARXQ96QS3 562 aa18.02■□□□□ 0.48
TMEM248-201ENST00000341567 NEFMP07197 916 aa18.02■□□□□ 0.47
TMEM248-201ENST00000341567 MLECQ14165 292 aa18.02■□□□□ 0.47
TMEM248-201ENST00000341567 TOP2BQ02880 1626 aa18.01■□□□□ 0.47
TMEM248-201ENST00000341567 SAFB2Q14151 953 aaKnown RBP eCLIP18.01■□□□□ 0.47
TMEM248-201ENST00000341567 ARAP1Q96P48 1450 aa18.01■□□□□ 0.47
TMEM248-201ENST00000341567 NUP155O75694 1391 aa18■□□□□ 0.47
TMEM248-201ENST00000341567 PHLDB1Q86UU1 1377 aa18■□□□□ 0.47
TMEM248-201ENST00000341567 KIF21BO75037 1637 aa18■□□□□ 0.47
TMEM248-201ENST00000341567 CUX1P39880 1505 aa17.98■□□□□ 0.47
TMEM248-201ENST00000341567 PPM1GO15355 546 aaPredicted RBP17.96■□□□□ 0.47
TMEM248-201ENST00000341567 PRDM2Q13029 1718 aa17.96■□□□□ 0.47
TMEM248-201ENST00000341567 PPP4R2Q9NY27 417 aa17.96■□□□□ 0.47
TMEM248-201ENST00000341567 ARID4BQ4LE39 1312 aaPredicted RBP17.95■□□□□ 0.46
TMEM248-201ENST00000341567 KNSTRNQ9Y448 316 aa17.94■□□□□ 0.46
TMEM248-201ENST00000341567 GAPVD1Q14C86 1478 aa17.94■□□□□ 0.46
TMEM248-201ENST00000341567 LAS1LQ9Y4W2 734 aaKnown RBP17.94■□□□□ 0.46
TMEM248-201ENST00000341567 CARMIL2Q6F5E8 1435 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms