RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 KIF21BO75037 1637 aa22.76■■□□□ 1.23
PERM1-201ENST00000341290 KIF27Q86VH2 1401 aa22.76■■□□□ 1.23
PERM1-201ENST00000341290 MIER1Q8N108 512 aa22.73■■□□□ 1.23
PERM1-201ENST00000341290 CLIP1P30622 1438 aa22.73■■□□□ 1.23
PERM1-201ENST00000341290 APLP2Q06481 763 aa22.73■■□□□ 1.23
PERM1-201ENST00000341290 ZNF608Q9ULD9 1512 aaPredicted RBP22.71■■□□□ 1.23
PERM1-201ENST00000341290 GAPVD1Q14C86 1478 aa22.71■■□□□ 1.23
PERM1-201ENST00000341290 GRIN2BQ13224 1484 aa22.67■■□□□ 1.22
PERM1-201ENST00000341290 ADAMTS12P58397 1594 aa22.67■■□□□ 1.22
PERM1-201ENST00000341290 MAGI1Q96QZ7 1491 aaPredicted RBP22.64■■□□□ 1.21
PERM1-201ENST00000341290 RAPGEF2Q9Y4G8 1499 aa22.63■■□□□ 1.21
PERM1-201ENST00000341290 PRXQ9BXM0 1461 aa22.61■■□□□ 1.21
PERM1-201ENST00000341290 IGF1RP08069 1367 aa22.6■■□□□ 1.21
PERM1-201ENST00000341290 AQRO60306 1485 aaKnown RBP eCLIP22.59■■□□□ 1.21
PERM1-201ENST00000341290 VPS8Q8N3P4 1428 aa22.58■■□□□ 1.2
PERM1-201ENST00000341290 TDRD9Q8NDG6 1382 aaKnown RBP22.56■■□□□ 1.2
PERM1-201ENST00000341290 FHAD1B1AJZ9 1412 aa22.52■■□□□ 1.2
PERM1-201ENST00000341290 SNAPC4Q5SXM2 1469 aa22.5■■□□□ 1.19
PERM1-201ENST00000341290 SYNJ2O15056 1496 aa22.48■■□□□ 1.19
PERM1-201ENST00000341290 CHD1O14646 1710 aa22.47■■□□□ 1.19
PERM1-201ENST00000341290 CTTNBP2Q8WZ74 1663 aa22.45■■□□□ 1.18
PERM1-201ENST00000341290 KANK4Q5T7N3 995 aaPredicted RBP22.44■■□□□ 1.18
PERM1-201ENST00000341290 CARMIL1Q5VZK9 1371 aa22.41■■□□□ 1.18
PERM1-201ENST00000341290 GRIN2AQ12879 1464 aa22.39■■□□□ 1.18
PERM1-201ENST00000341290 ITGAEP38570 1179 aa22.39■■□□□ 1.17
PERM1-201ENST00000341290 NUP160Q12769 1436 aa22.35■■□□□ 1.17
PERM1-201ENST00000341290 CEP170Q5SW79 1584 aa22.32■■□□□ 1.16
PERM1-201ENST00000341290 DHX57Q6P158 1386 aaKnown RBP22.3■■□□□ 1.16
PERM1-201ENST00000341290 CLASP1Q7Z460 1538 aa22.3■■□□□ 1.16
PERM1-201ENST00000341290 SHROOM2Q13796 1616 aa22.29■■□□□ 1.16
PERM1-201ENST00000341290 ARAP1Q96P48 1450 aa22.26■■□□□ 1.15
PERM1-201ENST00000341290 KIAA0586Q9BVV6 1533 aa22.22■■□□□ 1.15
PERM1-201ENST00000341290 IQGAP2Q13576 1575 aa22.2■■□□□ 1.14
PERM1-201ENST00000341290 UGGT2Q9NYU1 1516 aa22.19■■□□□ 1.14
PERM1-201ENST00000341290 SAMD9Q5K651 1589 aa22.18■■□□□ 1.14
PERM1-201ENST00000341290 EFCAB5A4FU69 1503 aa22.13■■□□□ 1.13
PERM1-201ENST00000341290 BCL11AQ9H165 835 aa22.11■■□□□ 1.13
PERM1-201ENST00000341290 CLSPNQ9HAW4 1339 aa22.1■■□□□ 1.13
PERM1-201ENST00000341290 CHMP7Q8WUX9 453 aaPredicted RBP22.08■■□□□ 1.12
PERM1-201ENST00000341290 CCNB3Q8WWL7 1395 aa22.07■■□□□ 1.12
PERM1-201ENST00000341290 KCNH8Q96L42 1107 aa22.07■■□□□ 1.12
PERM1-201ENST00000341290 ARHGAP35Q9NRY4 1499 aa22.06■■□□□ 1.12
PERM1-201ENST00000341290 RRBP1Q9P2E9 1410 aaKnown RBP22.04■■□□□ 1.12
PERM1-201ENST00000341290 ATP1B4Q9UN42 357 aaPredicted RBP22.04■■□□□ 1.12
PERM1-201ENST00000341290 SUPT16HQ9Y5B9 1047 aaKnown RBP22.03■■□□□ 1.12
PERM1-201ENST00000341290 KIAA0556O60303 1618 aa22.03■■□□□ 1.12
PERM1-201ENST00000341290 P3H3Q8IVL6 736 aa22.01■■□□□ 1.11
PERM1-201ENST00000341290 DISP1Q96F81 1524 aa22■■□□□ 1.11
PERM1-201ENST00000341290 RAB3GAP2Q9H2M9 1393 aa21.97■■□□□ 1.11
PERM1-201ENST00000341290 FAM50AQ14320 339 aaKnown RBP21.97■■□□□ 1.11
PERM1-201ENST00000341290 SIN3AQ96ST3 1273 aa21.95■■□□□ 1.1
PERM1-201ENST00000341290 HIRIP3Q9BW71 556 aaPredicted RBP21.93■■□□□ 1.1
PERM1-201ENST00000341290 OSCARQ8IYS5 282 aa21.9■■□□□ 1.1
PERM1-201ENST00000341290 DDX10Q13206 875 aaKnown RBP21.89■■□□□ 1.09
PERM1-201ENST00000341290 BCANQ96GW7 911 aa21.87■■□□□ 1.09
PERM1-201ENST00000341290 MAP3K1Q13233 1512 aa21.86■■□□□ 1.09
PERM1-201ENST00000341290 FBLN2P98095 1184 aa21.84■■□□□ 1.09
PERM1-201ENST00000341290 PHLDB1Q86UU1 1377 aa21.83■■□□□ 1.09
PERM1-201ENST00000341290 CARMIL2Q6F5E8 1435 aa21.83■■□□□ 1.09
PERM1-201ENST00000341290 TIAM1Q13009 1591 aa21.83■■□□□ 1.09
PERM1-201ENST00000341290 ERCC6L2Q5T890 1561 aa21.82■■□□□ 1.08
PERM1-201ENST00000341290 ANP32EQ9BTT0 268 aa21.82■■□□□ 1.08
PERM1-201ENST00000341290 MAPKBP1O60336 1514 aa21.82■■□□□ 1.08
PERM1-201ENST00000341290 PRG4Q92954 1404 aaPredicted RBP21.82■■□□□ 1.08
PERM1-201ENST00000341290 JPH4Q96JJ6 628 aa21.82■■□□□ 1.08
PERM1-201ENST00000341290 ABCA8O94911 1581 aa21.79■■□□□ 1.08
PERM1-201ENST00000341290 SETD5Q9C0A6 1442 aa21.79■■□□□ 1.08
PERM1-201ENST00000341290 RIMBP3CA6NJZ7 1639 aa21.77■■□□□ 1.08
PERM1-201ENST00000341290 RIMBP3BA6NNM3 1639 aa21.77■■□□□ 1.08
PERM1-201ENST00000341290 RIMBP3Q9UFD9 1639 aa21.77■■□□□ 1.08
PERM1-201ENST00000341290 ARHGEF11O15085 1522 aa21.75■■□□□ 1.07
PERM1-201ENST00000341290 FMN1Q68DA7 1419 aa21.74■■□□□ 1.07
PERM1-201ENST00000341290 TSHZ2Q9NRE2 1034 aa21.74■■□□□ 1.07
PERM1-201ENST00000341290 UHRF1BP1LA0JNW5 1464 aa21.74■■□□□ 1.07
PERM1-201ENST00000341290 LRRC9Q6ZRR7 1453 aa21.74■■□□□ 1.07
PERM1-201ENST00000341290 LRRIQ1Q96JM4 1722 aa21.74■■□□□ 1.07
PERM1-201ENST00000341290 RAPGEF6Q8TEU7 1601 aa21.74■■□□□ 1.07
PERM1-201ENST00000341290 FYCO1Q9BQS8 1478 aa21.72■■□□□ 1.07
PERM1-201ENST00000341290 CFAP43Q8NDM7 1665 aa21.71■■□□□ 1.07
PERM1-201ENST00000341290 PCF11O94913 1555 aaKnown RBP21.71■■□□□ 1.07
PERM1-201ENST00000341290 CASKIN1Q8WXD9 1431 aa21.7■■□□□ 1.06
PERM1-201ENST00000341290 HECW1Q76N89 1606 aa21.7■■□□□ 1.06
PERM1-201ENST00000341290 FHOD3Q2V2M9 1422 aa21.7■■□□□ 1.06
PERM1-201ENST00000341290 FKBP8Q14318 412 aa21.69■■□□□ 1.06
PERM1-201ENST00000341290 TRIM52Q96A61 297 aa21.68■■□□□ 1.06
PERM1-201ENST00000341290 ABCC2Q92887 1545 aa21.64■■□□□ 1.06
PERM1-201ENST00000341290 ADCY10Q96PN6 1610 aa21.62■■□□□ 1.05
PERM1-201ENST00000341290 PPP1R15AO75807 674 aaPredicted RBP21.61■■□□□ 1.05
PERM1-201ENST00000341290 PTPRGP23470 1445 aa21.6■■□□□ 1.05
PERM1-201ENST00000341290 CCDC18Q5T9S5 1454 aa21.59■■□□□ 1.05
PERM1-201ENST00000341290 NUP153P49790 1475 aaKnown RBP21.58■■□□□ 1.04
PERM1-201ENST00000341290 UACAQ9BZF9 1416 aa21.58■■□□□ 1.04
PERM1-201ENST00000341290 KDM5BQ9UGL1 1544 aa21.56■■□□□ 1.04
PERM1-201ENST00000341290 ANP32CO43423 234 aa21.54■■□□□ 1.04
PERM1-201ENST00000341290 PLB1Q6P1J6 1458 aa21.53■■□□□ 1.04
PERM1-201ENST00000341290 ZCCHC11Q5TAX3 1644 aaKnown RBP21.53■■□□□ 1.04
PERM1-201ENST00000341290 EPRSP07814 1512 aaKnown RBP21.51■■□□□ 1.03
PERM1-201ENST00000341290 TONSLQ96HA7 1378 aa21.5■■□□□ 1.03
PERM1-201ENST00000341290 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.48■■□□□ 1.03
PERM1-201ENST00000341290 NEFLP07196 543 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms