RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 EEA1Q15075 1411 aa21.89■■□□□ 1.09
TUBD1-202ENST00000340993 ARHGEF11O15085 1522 aa21.88■■□□□ 1.09
TUBD1-202ENST00000340993 PRXQ9BXM0 1461 aa21.87■■□□□ 1.09
TUBD1-202ENST00000340993 ERCC6L2Q5T890 1561 aa21.83■■□□□ 1.09
TUBD1-202ENST00000340993 RANGAP1P46060 587 aaPredicted RBP21.8■■□□□ 1.08
TUBD1-202ENST00000340993 CTTNBP2Q8WZ74 1663 aa21.79■■□□□ 1.08
TUBD1-202ENST00000340993 TTBK1Q5TCY1 1321 aaPredicted RBP21.79■■□□□ 1.08
TUBD1-202ENST00000340993 JPH4Q96JJ6 628 aa21.79■■□□□ 1.08
TUBD1-202ENST00000340993 KIAA0586Q9BVV6 1533 aa21.78■■□□□ 1.08
TUBD1-202ENST00000340993 IQGAP2Q13576 1575 aa21.77■■□□□ 1.08
TUBD1-202ENST00000340993 SHROOM2Q13796 1616 aa21.77■■□□□ 1.07
TUBD1-202ENST00000340993 PRG4Q92954 1404 aaPredicted RBP21.76■■□□□ 1.07
TUBD1-202ENST00000340993 CYB5RLQ6IPT4 315 aa21.75■■□□□ 1.07
TUBD1-202ENST00000340993 KIF21BO75037 1637 aa21.74■■□□□ 1.07
TUBD1-202ENST00000340993 ARAP1Q96P48 1450 aa21.73■■□□□ 1.07
TUBD1-202ENST00000340993 UBTFP17480 764 aaKnown RBP21.71■■□□□ 1.07
TUBD1-202ENST00000340993 GOLGA3Q08378 1498 aa21.66■■□□□ 1.06
TUBD1-202ENST00000340993 P3H3Q8IVL6 736 aa21.63■■□□□ 1.05
TUBD1-202ENST00000340993 DISP1Q96F81 1524 aa21.58■■□□□ 1.05
TUBD1-202ENST00000340993 UGGT2Q9NYU1 1516 aa21.58■■□□□ 1.04
TUBD1-202ENST00000340993 CARMIL2Q6F5E8 1435 aa21.57■■□□□ 1.04
TUBD1-202ENST00000340993 KIAA0556O60303 1618 aa21.57■■□□□ 1.04
TUBD1-202ENST00000340993 LOC105371045A0A1W2PR82 267 aa21.55■■□□□ 1.04
TUBD1-202ENST00000340993 TNIKQ9UKE5 1360 aa21.49■■□□□ 1.03
TUBD1-202ENST00000340993 PTPRGP23470 1445 aa21.49■■□□□ 1.03
TUBD1-202ENST00000340993 FHOD3Q2V2M9 1422 aa21.46■■□□□ 1.03
TUBD1-202ENST00000340993 SAMD9Q5K651 1589 aa21.45■■□□□ 1.02
TUBD1-202ENST00000340993 ADCY10Q96PN6 1610 aa21.42■■□□□ 1.02
TUBD1-202ENST00000340993 ARID3CA6NKF2 412 aa21.41■■□□□ 1.02
TUBD1-202ENST00000340993 PLB1Q6P1J6 1458 aa21.38■■□□□ 1.01
TUBD1-202ENST00000340993 ARHGAP35Q9NRY4 1499 aa21.36■■□□□ 1.01
TUBD1-202ENST00000340993 EFCAB5A4FU69 1503 aa21.35■■□□□ 1.01
TUBD1-202ENST00000340993 UACAQ9BZF9 1416 aa21.34■■□□□ 1.01
TUBD1-202ENST00000340993 CLIP1P30622 1438 aa21.32■■□□□ 1
TUBD1-202ENST00000340993 ABCC2Q92887 1545 aa21.3■■□□□ 1
TUBD1-202ENST00000340993 NPM1P06748 294 aaKnown RBP eCLIP21.3■■□□□ 1
TUBD1-202ENST00000340993 TRHP20396 242 aaPredicted RBP21.3■■□□□ 1
TUBD1-202ENST00000340993 ATP1B4Q9UN42 357 aaPredicted RBP21.3■■□□□ 1
TUBD1-202ENST00000340993 CEP162Q5TB80 1403 aa21.28■■□□□ 1
TUBD1-202ENST00000340993 ABCA8O94911 1581 aa21.28■■□□□ 1
TUBD1-202ENST00000340993 RAPGEF6Q8TEU7 1601 aa21.26■□□□□ 0.99
TUBD1-202ENST00000340993 ZCCHC11Q5TAX3 1644 aaKnown RBP21.25■□□□□ 0.99
TUBD1-202ENST00000340993 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.22■□□□□ 0.99
TUBD1-202ENST00000340993 HNRNPUL2Q1KMD3 747 aaKnown RBP21.22■□□□□ 0.99
TUBD1-202ENST00000340993 UHRF1BP1LA0JNW5 1464 aa21.22■□□□□ 0.99
TUBD1-202ENST00000340993 FMN1Q68DA7 1419 aa21.16■□□□□ 0.98
TUBD1-202ENST00000340993 NUP153P49790 1475 aaKnown RBP21.16■□□□□ 0.98
TUBD1-202ENST00000340993 KDM5BQ9UGL1 1544 aa21.16■□□□□ 0.98
TUBD1-202ENST00000340993 PCF11O94913 1555 aaKnown RBP21.15■□□□□ 0.98
TUBD1-202ENST00000340993 ASXL2Q76L83 1435 aa21.15■□□□□ 0.98
TUBD1-202ENST00000340993 CDK13Q14004 1512 aaKnown RBP21.14■□□□□ 0.97
TUBD1-202ENST00000340993 ATP10BO94823 1461 aa21.12■□□□□ 0.97
TUBD1-202ENST00000340993 MAPKBP1O60336 1514 aa21.12■□□□□ 0.97
TUBD1-202ENST00000340993 KIF13AQ9H1H9 1805 aa21.12■□□□□ 0.97
TUBD1-202ENST00000340993 LRRIQ1Q96JM4 1722 aa21.11■□□□□ 0.97
TUBD1-202ENST00000340993 KCNH8Q96L42 1107 aa21.11■□□□□ 0.97
TUBD1-202ENST00000340993 HECW1Q76N89 1606 aa21.11■□□□□ 0.97
TUBD1-202ENST00000340993 FAM69CQ0P6D2 419 aa21.1■□□□□ 0.97
TUBD1-202ENST00000340993 TSPOAP1O95153 1857 aa21.08■□□□□ 0.97
TUBD1-202ENST00000340993 DIP2BQ9P265 1576 aa21.07■□□□□ 0.96
TUBD1-202ENST00000340993 WDR7Q9Y4E6 1490 aa21.04■□□□□ 0.96
TUBD1-202ENST00000340993 EPRSP07814 1512 aaKnown RBP21.04■□□□□ 0.96
TUBD1-202ENST00000340993 ABCC10Q5T3U5 1492 aa21.04■□□□□ 0.96
TUBD1-202ENST00000340993 CASKIN1Q8WXD9 1431 aa21.03■□□□□ 0.96
TUBD1-202ENST00000340993 FYCO1Q9BQS8 1478 aa21.01■□□□□ 0.95
TUBD1-202ENST00000340993 PLEKHD1A6NEE1 506 aa20.97■□□□□ 0.95
TUBD1-202ENST00000340993 VPS8Q8N3P4 1428 aa20.96■□□□□ 0.95
TUBD1-202ENST00000340993 CCDC18Q5T9S5 1454 aa20.91■□□□□ 0.94
TUBD1-202ENST00000340993 MAGI3Q5TCQ9 1506 aa20.9■□□□□ 0.94
TUBD1-202ENST00000340993 KIF14Q15058 1648 aa20.89■□□□□ 0.94
TUBD1-202ENST00000340993 MAP3K4Q9Y6R4 1608 aa20.88■□□□□ 0.93
TUBD1-202ENST00000340993 GLI2P10070 1586 aa20.88■□□□□ 0.93
TUBD1-202ENST00000340993 CDK11AQ9UQ88 783 aaPredicted RBP20.87■□□□□ 0.93
TUBD1-202ENST00000340993 PPRC1Q5VV67 1664 aaKnown RBP20.86■□□□□ 0.93
TUBD1-202ENST00000340993 TTC37Q6PGP7 1564 aa20.86■□□□□ 0.93
TUBD1-202ENST00000340993 CFAP43Q8NDM7 1665 aa20.84■□□□□ 0.93
TUBD1-202ENST00000340993 CD109Q6YHK3 1445 aa20.84■□□□□ 0.93
TUBD1-202ENST00000340993 TROQ12816 1431 aaPredicted RBP20.84■□□□□ 0.93
TUBD1-202ENST00000340993 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.83■□□□□ 0.93
TUBD1-202ENST00000340993 ABCA9Q8IUA7 1624 aa20.82■□□□□ 0.92
TUBD1-202ENST00000340993 MTUS2Q5JR59 1369 aa20.81■□□□□ 0.92
TUBD1-202ENST00000340993 TIAM1Q13009 1591 aa20.81■□□□□ 0.92
TUBD1-202ENST00000340993 APLP2Q06481 763 aa20.78■□□□□ 0.92
TUBD1-202ENST00000340993 KANK4Q5T7N3 995 aaPredicted RBP20.76■□□□□ 0.91
TUBD1-202ENST00000340993 AEBP2Q6ZN18 517 aaPredicted RBP20.76■□□□□ 0.91
TUBD1-202ENST00000340993 PPARGC1BQ86YN6 1023 aaKnown RBP20.76■□□□□ 0.91
TUBD1-202ENST00000340993 MYO5CQ9NQX4 1742 aa20.74■□□□□ 0.91
TUBD1-202ENST00000340993 EHBP1L1Q8N3D4 1523 aa20.73■□□□□ 0.91
TUBD1-202ENST00000340993 TEX14Q8IWB6 1497 aa20.72■□□□□ 0.91
TUBD1-202ENST00000340993 KDM6BO15054 1643 aa20.71■□□□□ 0.91
TUBD1-202ENST00000340993 LRRC9Q6ZRR7 1453 aa20.7■□□□□ 0.9
TUBD1-202ENST00000340993 CDC42BPAQ5VT25 1732 aa20.69■□□□□ 0.9
TUBD1-202ENST00000340993 ARHGAP5Q13017 1502 aa20.68■□□□□ 0.9
TUBD1-202ENST00000340993 SUPT6HQ7KZ85 1726 aaKnown RBP20.68■□□□□ 0.9
TUBD1-202ENST00000340993 CDC42BPBQ9Y5S2 1711 aa20.68■□□□□ 0.9
TUBD1-202ENST00000340993 ZNF777Q9ULD5 760 aaPredicted RBP20.67■□□□□ 0.9
TUBD1-202ENST00000340993 FANCAO15360 1455 aa20.67■□□□□ 0.9
TUBD1-202ENST00000340993 COL17A1Q9UMD9 1497 aaPredicted RBP20.65■□□□□ 0.9
TUBD1-202ENST00000340993 PREX2Q70Z35 1606 aa20.64■□□□□ 0.9
TUBD1-202ENST00000340993 CCNB3Q8WWL7 1395 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms