RNA–Protein interactions for RNA: ENST00000340811.8

PKP2-202, Transcript of plakophilin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-202ENST00000340811 ESF1Q9H501 851 aaKnown RBP17.65■□□□□ 0.42
PKP2-202ENST00000340811 IGF1RP08069 1367 aa17.65■□□□□ 0.42
PKP2-202ENST00000340811 CFTRP13569 1480 aa17.64■□□□□ 0.41
PKP2-202ENST00000340811 BCANQ96GW7 911 aa17.6■□□□□ 0.41
PKP2-202ENST00000340811 KCNH8Q96L42 1107 aa17.59■□□□□ 0.41
PKP2-202ENST00000340811 FHOD3Q2V2M9 1422 aa17.59■□□□□ 0.41
PKP2-202ENST00000340811 SIN3AQ96ST3 1273 aa17.55■□□□□ 0.4
PKP2-202ENST00000340811 CUX1P39880 1505 aa17.55■□□□□ 0.4
PKP2-202ENST00000340811 HMGXB3Q12766 1538 aa17.52■□□□□ 0.4
PKP2-202ENST00000340811 CCNB3Q8WWL7 1395 aa17.52■□□□□ 0.39
PKP2-202ENST00000340811 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.48■□□□□ 0.39
PKP2-202ENST00000340811 AQRO60306 1485 aaKnown RBP eCLIP17.48■□□□□ 0.39
PKP2-202ENST00000340811 DDX10Q13206 875 aaKnown RBP17.46■□□□□ 0.39
PKP2-202ENST00000340811 PEG3Q9GZU2 1588 aa17.46■□□□□ 0.39
PKP2-202ENST00000340811 PLEKHD1A6NEE1 506 aa17.46■□□□□ 0.39
PKP2-202ENST00000340811 FHAD1B1AJZ9 1412 aa17.46■□□□□ 0.39
PKP2-202ENST00000340811 CHGAP10645 457 aaKnown RBP17.46■□□□□ 0.39
PKP2-202ENST00000340811 TSPY4P0CV99 314 aa17.44■□□□□ 0.38
PKP2-202ENST00000340811 TSPY10P0CW01 314 aa17.44■□□□□ 0.38
PKP2-202ENST00000340811 TONSLQ96HA7 1378 aa17.44■□□□□ 0.38
PKP2-202ENST00000340811 CFDP1Q9UEE9 299 aaPredicted RBP17.44■□□□□ 0.38
PKP2-202ENST00000340811 STAG3Q9UJ98 1225 aa17.44■□□□□ 0.38
PKP2-202ENST00000340811 MIER1Q8N108 512 aa17.42■□□□□ 0.38
PKP2-202ENST00000340811 TOP2BQ02880 1626 aa17.41■□□□□ 0.38
PKP2-202ENST00000340811 GAPVD1Q14C86 1478 aa17.39■□□□□ 0.38
PKP2-202ENST00000340811 KIF21BO75037 1637 aa17.38■□□□□ 0.37
PKP2-202ENST00000340811 ARAP1Q96P48 1450 aa17.38■□□□□ 0.37
PKP2-202ENST00000340811 NEFLP07196 543 aa17.37■□□□□ 0.37
PKP2-202ENST00000340811 POLA1P09884 1462 aaPredicted RBP17.37■□□□□ 0.37
PKP2-202ENST00000340811 GTF3C3Q9Y5Q9 886 aa17.36■□□□□ 0.37
PKP2-202ENST00000340811 TOPBP1Q92547 1522 aa17.36■□□□□ 0.37
PKP2-202ENST00000340811 PRXQ9BXM0 1461 aa17.36■□□□□ 0.37
PKP2-202ENST00000340811 FOXD1Q16676 465 aa17.35■□□□□ 0.37
PKP2-202ENST00000340811 JPH4Q96JJ6 628 aa17.35■□□□□ 0.37
PKP2-202ENST00000340811 KDM2AQ9Y2K7 1162 aa17.35■□□□□ 0.37
PKP2-202ENST00000340811 TRHP20396 242 aaPredicted RBP17.35■□□□□ 0.37
PKP2-202ENST00000340811 SENP3Q9H4L4 574 aaPredicted RBP17.31■□□□□ 0.36
PKP2-202ENST00000340811 ANP32CO43423 234 aa17.3■□□□□ 0.36
PKP2-202ENST00000340811 RAB3GAP2Q9H2M9 1393 aa17.3■□□□□ 0.36
PKP2-202ENST00000340811 FMN1Q68DA7 1419 aa17.3■□□□□ 0.36
PKP2-202ENST00000340811 ARHGAP35Q9NRY4 1499 aa17.29■□□□□ 0.36
PKP2-202ENST00000340811 RGL3Q3MIN7 710 aa17.25■□□□□ 0.35
PKP2-202ENST00000340811 ACIN1Q9UKV3 1341 aaKnown RBP17.24■□□□□ 0.35
PKP2-202ENST00000340811 ARID4BQ4LE39 1312 aaPredicted RBP17.24■□□□□ 0.35
PKP2-202ENST00000340811 SETD5Q9C0A6 1442 aa17.22■□□□□ 0.35
PKP2-202ENST00000340811 PHLDB1Q86UU1 1377 aa17.21■□□□□ 0.35
PKP2-202ENST00000340811 ZNF644Q9H582 1327 aaPredicted RBP17.18■□□□□ 0.34
PKP2-202ENST00000340811 SENP3-EIF4A1A0A087X0R7 540 aa17.17■□□□□ 0.34
PKP2-202ENST00000340811 URB2Q14146 1524 aaKnown RBP17.17■□□□□ 0.34
PKP2-202ENST00000340811 ERICH3Q5RHP9 1530 aa17.17■□□□□ 0.34
PKP2-202ENST00000340811 CARMIL2Q6F5E8 1435 aa17.15■□□□□ 0.34
PKP2-202ENST00000340811 HNRNPMP52272 730 aaKnown RBP eCLIP17.15■□□□□ 0.34
PKP2-202ENST00000340811 DNMBPQ6XZF7 1577 aa17.14■□□□□ 0.34
PKP2-202ENST00000340811 DHX57Q6P158 1386 aaKnown RBP17.14■□□□□ 0.33
PKP2-202ENST00000340811 MRC2Q9UBG0 1479 aa17.11■□□□□ 0.33
PKP2-202ENST00000340811 ABCA10Q8WWZ4 1543 aa17.08■□□□□ 0.33
PKP2-202ENST00000340811 GRIN2BQ13224 1484 aa17.08■□□□□ 0.32
PKP2-202ENST00000340811 ZNF608Q9ULD9 1512 aaPredicted RBP17.08■□□□□ 0.32
PKP2-202ENST00000340811 LRRC9Q6ZRR7 1453 aa17.08■□□□□ 0.32
PKP2-202ENST00000340811 FAM9BQ8IZU0 186 aa17.07■□□□□ 0.32
PKP2-202ENST00000340811 EIF4G2P78344 907 aaKnown RBP eCLIP17.07■□□□□ 0.32
PKP2-202ENST00000340811 MPHOSPH9Q99550 1183 aa17.07■□□□□ 0.32
PKP2-202ENST00000340811 SCAF1Q9H7N4 1312 aaKnown RBP17.07■□□□□ 0.32
PKP2-202ENST00000340811 CLSPNQ9HAW4 1339 aa17.07■□□□□ 0.32
PKP2-202ENST00000340811 SLC24A1O60721 1099 aa17.06■□□□□ 0.32
PKP2-202ENST00000340811 LAMC3Q9Y6N6 1575 aa17.06■□□□□ 0.32
PKP2-202ENST00000340811 PKD2Q13563 968 aa17.05■□□□□ 0.32
PKP2-202ENST00000340811 BIVM-ERCC5R4GMW8 1640 aa17.04■□□□□ 0.32
PKP2-202ENST00000340811 SALL2Q9Y467 1007 aaPredicted RBP17.03■□□□□ 0.32
PKP2-202ENST00000340811 PTPRGP23470 1445 aa17.03■□□□□ 0.32
PKP2-202ENST00000340811 PPP1R15AO75807 674 aaPredicted RBP17.02■□□□□ 0.32
PKP2-202ENST00000340811 SNAPC4Q5SXM2 1469 aa17.02■□□□□ 0.32
PKP2-202ENST00000340811 HNRNPUQ00839 825 aaKnown RBP eCLIP17.01■□□□□ 0.31
PKP2-202ENST00000340811 MLECQ14165 292 aa17.01■□□□□ 0.31
PKP2-202ENST00000340811 CYB5RLQ6IPT4 315 aa17.01■□□□□ 0.31
PKP2-202ENST00000340811 CASKIN1Q8WXD9 1431 aa17■□□□□ 0.31
PKP2-202ENST00000340811 OSCARQ8IYS5 282 aa16.99■□□□□ 0.31
PKP2-202ENST00000340811 DCAF11Q8TEB1 546 aa16.98■□□□□ 0.31
PKP2-202ENST00000340811 FGD6Q6ZV73 1430 aa16.97■□□□□ 0.31
PKP2-202ENST00000340811 NEFMP07197 916 aa16.97■□□□□ 0.31
PKP2-202ENST00000340811 IFT140Q96RY7 1462 aa16.97■□□□□ 0.31
PKP2-202ENST00000340811 L3MBTL2Q969R5 705 aa16.97■□□□□ 0.31
PKP2-202ENST00000340811 CCDC18Q5T9S5 1454 aa16.96■□□□□ 0.31
PKP2-202ENST00000340811 NUP155O75694 1391 aa16.95■□□□□ 0.3
PKP2-202ENST00000340811 CARD11Q9BXL7 1154 aa16.94■□□□□ 0.3
PKP2-202ENST00000340811 NCOA2Q15596 1464 aa16.94■□□□□ 0.3
PKP2-202ENST00000340811 C14orf37Q86TY3 774 aa16.94■□□□□ 0.3
PKP2-202ENST00000340811 PRDM2Q13029 1718 aa16.93■□□□□ 0.3
PKP2-202ENST00000340811 MRS2Q9HD23 443 aa16.92■□□□□ 0.3
PKP2-202ENST00000340811 ERICH6Q7L0X2 663 aa16.92■□□□□ 0.3
PKP2-202ENST00000340811 HSPA5P11021 654 aaKnown RBP16.92■□□□□ 0.3
PKP2-202ENST00000340811 MYOM3Q5VTT5 1437 aa16.91■□□□□ 0.3
PKP2-202ENST00000340811 RRBP1Q9P2E9 1410 aaKnown RBP16.91■□□□□ 0.3
PKP2-202ENST00000340811 PLEKHG5O94827 1062 aa16.9■□□□□ 0.3
PKP2-202ENST00000340811 GGT6Q6P531 493 aa16.9■□□□□ 0.3
PKP2-202ENST00000340811 PRG4Q92954 1404 aaPredicted RBP16.9■□□□□ 0.3
PKP2-202ENST00000340811 EFCAB2Q5VUJ9 269 aa16.89■□□□□ 0.3
PKP2-202ENST00000340811 CDK13Q14004 1512 aaKnown RBP16.88■□□□□ 0.29
PKP2-202ENST00000340811 FYCO1Q9BQS8 1478 aa16.88■□□□□ 0.29
PKP2-202ENST00000340811 TIAM1Q13009 1591 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms