RNA–Protein interactions for RNA: ENST00000340790.8

PALM3-201, Transcript of paralemmin 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PALM3, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3-201ENST00000340790 WDR97A6NE52 1622 aa27.62■■■□□ 2.01
PALM3-201ENST00000340790 EFCAB5A4FU69 1503 aa27.6■■■□□ 2.01
PALM3-201ENST00000340790 CTTNBP2Q8WZ74 1663 aa27.6■■■□□ 2.01
PALM3-201ENST00000340790 ACIN1Q9UKV3 1341 aaKnown RBP27.59■■■□□ 2.01
PALM3-201ENST00000340790 CFAP43Q8NDM7 1665 aa27.59■■■□□ 2.01
PALM3-201ENST00000340790 PCF11O94913 1555 aaKnown RBP27.58■■■□□ 2.01
PALM3-201ENST00000340790 PDS5BQ9NTI5 1447 aa27.57■■■□□ 2
PALM3-201ENST00000340790 P3H3Q8IVL6 736 aa27.55■■■□□ 2
PALM3-201ENST00000340790 CENPBP07199 599 aaPredicted RBP27.55■■■□□ 2
PALM3-201ENST00000340790 FHOD3Q2V2M9 1422 aa27.52■■■□□ 2
PALM3-201ENST00000340790 ITGAEP38570 1179 aa27.51■■□□□ 1.99
PALM3-201ENST00000340790 FYCO1Q9BQS8 1478 aa27.51■■□□□ 1.99
PALM3-201ENST00000340790 ABCA5Q8WWZ7 1642 aa27.51■■□□□ 1.99
PALM3-201ENST00000340790 NEUROD1Q13562 356 aa27.5■■□□□ 1.99
PALM3-201ENST00000340790 AQRO60306 1485 aaKnown RBP eCLIP27.48■■□□□ 1.99
PALM3-201ENST00000340790 PHLDB1Q86UU1 1377 aa27.47■■□□□ 1.99
PALM3-201ENST00000340790 CASKIN1Q8WXD9 1431 aa27.47■■□□□ 1.99
PALM3-201ENST00000340790 ATP1B4Q9UN42 357 aaPredicted RBP27.45■■□□□ 1.98
PALM3-201ENST00000340790 GAPVD1Q14C86 1478 aa27.45■■□□□ 1.98
PALM3-201ENST00000340790 TDRD9Q8NDG6 1382 aaKnown RBP27.44■■□□□ 1.98
PALM3-201ENST00000340790 KIF21AQ7Z4S6 1674 aa27.44■■□□□ 1.98
PALM3-201ENST00000340790 RAB3GAP2Q9H2M9 1393 aa27.41■■□□□ 1.98
PALM3-201ENST00000340790 FMN1Q68DA7 1419 aa27.41■■□□□ 1.98
PALM3-201ENST00000340790 DNAJC5BQ9UF47 199 aa27.39■■□□□ 1.98
PALM3-201ENST00000340790 SETD5Q9C0A6 1442 aa27.37■■□□□ 1.97
PALM3-201ENST00000340790 MIER1Q8N108 512 aa27.37■■□□□ 1.97
PALM3-201ENST00000340790 FAM50AQ14320 339 aaKnown RBP27.35■■□□□ 1.97
PALM3-201ENST00000340790 SAMD9Q5K651 1589 aa27.34■■□□□ 1.97
PALM3-201ENST00000340790 TARBP1Q13395 1621 aaKnown RBP27.32■■□□□ 1.96
PALM3-201ENST00000340790 SNAPC4Q5SXM2 1469 aa27.31■■□□□ 1.96
PALM3-201ENST00000340790 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.29■■□□□ 1.96
PALM3-201ENST00000340790 MAPKBP1O60336 1514 aa27.27■■□□□ 1.96
PALM3-201ENST00000340790 GTF3C3Q9Y5Q9 886 aa27.2■■□□□ 1.95
PALM3-201ENST00000340790 PBRM1Q86U86 1689 aa27.2■■□□□ 1.94
PALM3-201ENST00000340790 MTUS2Q5JR59 1369 aa27.19■■□□□ 1.94
PALM3-201ENST00000340790 YTHDC1Q96MU7 727 aaKnown RBP27.19■■□□□ 1.94
PALM3-201ENST00000340790 THOC2Q8NI27 1593 aaKnown RBP27.19■■□□□ 1.94
PALM3-201ENST00000340790 LRRIQ1Q96JM4 1722 aa27.18■■□□□ 1.94
PALM3-201ENST00000340790 GRIN2BQ13224 1484 aa27.17■■□□□ 1.94
PALM3-201ENST00000340790 FGD6Q6ZV73 1430 aa27.17■■□□□ 1.94
PALM3-201ENST00000340790 MRC2Q9UBG0 1479 aa27.13■■□□□ 1.93
PALM3-201ENST00000340790 SUPT6HQ7KZ85 1726 aaKnown RBP27.08■■□□□ 1.93
PALM3-201ENST00000340790 ADAMTS12P58397 1594 aa27.08■■□□□ 1.93
PALM3-201ENST00000340790 EHBP1L1Q8N3D4 1523 aa27.07■■□□□ 1.92
PALM3-201ENST00000340790 NCOA2Q15596 1464 aa27.06■■□□□ 1.92
PALM3-201ENST00000340790 IQGAP2Q13576 1575 aa27.05■■□□□ 1.92
PALM3-201ENST00000340790 MYOM3Q5VTT5 1437 aa27.03■■□□□ 1.92
PALM3-201ENST00000340790 CCDC18Q5T9S5 1454 aa27.03■■□□□ 1.92
PALM3-201ENST00000340790 TIMELESSQ9UNS1 1208 aa27.02■■□□□ 1.92
PALM3-201ENST00000340790 SIN3AQ96ST3 1273 aa27■■□□□ 1.91
PALM3-201ENST00000340790 HECW1Q76N89 1606 aa26.99■■□□□ 1.91
PALM3-201ENST00000340790 IFT140Q96RY7 1462 aa26.97■■□□□ 1.91
PALM3-201ENST00000340790 PELP1Q8IZL8 1130 aaKnown RBP26.97■■□□□ 1.91
PALM3-201ENST00000340790 HFM1A2PYH4 1435 aa26.97■■□□□ 1.91
PALM3-201ENST00000340790 UGGT2Q9NYU1 1516 aa26.97■■□□□ 1.91
PALM3-201ENST00000340790 ARHGEF11O15085 1522 aa26.95■■□□□ 1.9
PALM3-201ENST00000340790 PTPRKQ15262 1439 aa26.94■■□□□ 1.9
PALM3-201ENST00000340790 WDR62O43379 1518 aa26.93■■□□□ 1.9
PALM3-201ENST00000340790 PTPN23Q9H3S7 1636 aa26.93■■□□□ 1.9
PALM3-201ENST00000340790 MAGI3Q5TCQ9 1506 aa26.93■■□□□ 1.9
PALM3-201ENST00000340790 EPRSP07814 1512 aaKnown RBP26.89■■□□□ 1.89
PALM3-201ENST00000340790 ZNF608Q9ULD9 1512 aaPredicted RBP26.89■■□□□ 1.89
PALM3-201ENST00000340790 UACAQ9BZF9 1416 aa26.88■■□□□ 1.89
PALM3-201ENST00000340790 NAIPQ13075 1403 aa26.87■■□□□ 1.89
PALM3-201ENST00000340790 TCOF1Q13428 1488 aaKnown RBP26.83■■□□□ 1.89
PALM3-201ENST00000340790 PPP1R15AO75807 674 aaPredicted RBP26.82■■□□□ 1.88
PALM3-201ENST00000340790 KIAA0586Q9BVV6 1533 aa26.81■■□□□ 1.88
PALM3-201ENST00000340790 CDK13Q14004 1512 aaKnown RBP26.79■■□□□ 1.88
PALM3-201ENST00000340790 MIA2Q96PC5 1412 aa26.76■■□□□ 1.87
PALM3-201ENST00000340790 EIF4G3O43432 1585 aaKnown RBP26.76■■□□□ 1.87
PALM3-201ENST00000340790 TONSLQ96HA7 1378 aa26.76■■□□□ 1.87
PALM3-201ENST00000340790 KIAA0556O60303 1618 aa26.76■■□□□ 1.87
PALM3-201ENST00000340790 GRIN2AQ12879 1464 aa26.74■■□□□ 1.87
PALM3-201ENST00000340790 GCC2Q8IWJ2 1684 aa26.74■■□□□ 1.87
PALM3-201ENST00000340790 DISP1Q96F81 1524 aa26.73■■□□□ 1.87
PALM3-201ENST00000340790 AKNAQ7Z591 1439 aa26.71■■□□□ 1.87
PALM3-201ENST00000340790 ERCC6Q03468 1493 aa26.7■■□□□ 1.86
PALM3-201ENST00000340790 RRP7BPQ9NSQ0 103 aa26.68■■□□□ 1.86
PALM3-201ENST00000340790 ARID3CA6NKF2 412 aa26.67■■□□□ 1.86
PALM3-201ENST00000340790 CHIC2Q9UKJ5 165 aa26.67■■□□□ 1.86
PALM3-201ENST00000340790 DDX10Q13206 875 aaKnown RBP26.65■■□□□ 1.86
PALM3-201ENST00000340790 MAGI1Q96QZ7 1491 aaPredicted RBP26.65■■□□□ 1.86
PALM3-201ENST00000340790 RAPGEF6Q8TEU7 1601 aa26.65■■□□□ 1.86
PALM3-201ENST00000340790 NUP153P49790 1475 aaKnown RBP26.62■■□□□ 1.85
PALM3-201ENST00000340790 CDK11AQ9UQ88 783 aaPredicted RBP26.59■■□□□ 1.85
PALM3-201ENST00000340790 SYNJ2O15056 1496 aa26.57■■□□□ 1.84
PALM3-201ENST00000340790 CHMP7Q8WUX9 453 aaPredicted RBP26.57■■□□□ 1.84
PALM3-201ENST00000340790 TRIM52Q96A61 297 aa26.56■■□□□ 1.84
PALM3-201ENST00000340790 KDM6BO15054 1643 aa26.56■■□□□ 1.84
PALM3-201ENST00000340790 HIRIP3Q9BW71 556 aaPredicted RBP26.55■■□□□ 1.84
PALM3-201ENST00000340790 CEP170Q5SW79 1584 aa26.55■■□□□ 1.84
PALM3-201ENST00000340790 DAPK1P53355 1430 aa26.53■■□□□ 1.84
PALM3-201ENST00000340790 DNMT1P26358 1616 aaKnown RBP26.52■■□□□ 1.84
PALM3-201ENST00000340790 ROCK1Q13464 1354 aa26.52■■□□□ 1.84
PALM3-201ENST00000340790 DENND4BO75064 1496 aaPredicted RBP26.52■■□□□ 1.84
PALM3-201ENST00000340790 KDM5BQ9UGL1 1544 aa26.52■■□□□ 1.84
PALM3-201ENST00000340790 KCNH8Q96L42 1107 aa26.5■■□□□ 1.83
PALM3-201ENST00000340790 MPHOSPH9Q99550 1183 aa26.49■■□□□ 1.83
PALM3-201ENST00000340790 ABCC5O15440 1437 aa26.47■■□□□ 1.83
PALM3-201ENST00000340790 TROQ12816 1431 aaPredicted RBP26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms