RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 MRC2Q9UBG0 1479 aa24.74■■□□□ 1.55
CDK11B-201ENST00000340677 ABCA10Q8WWZ4 1543 aa24.74■■□□□ 1.55
CDK11B-201ENST00000340677 WDR97A6NE52 1622 aa24.73■■□□□ 1.55
CDK11B-201ENST00000340677 PDE4CQ08493 712 aa24.72■■□□□ 1.55
CDK11B-201ENST00000340677 ERICH3Q5RHP9 1530 aa24.71■■□□□ 1.55
CDK11B-201ENST00000340677 TNIKQ9UKE5 1360 aa24.68■■□□□ 1.54
CDK11B-201ENST00000340677 PRXQ9BXM0 1461 aa24.67■■□□□ 1.54
CDK11B-201ENST00000340677 ERCC6Q03468 1493 aa24.65■■□□□ 1.54
CDK11B-201ENST00000340677 WDR62O43379 1518 aa24.65■■□□□ 1.54
CDK11B-201ENST00000340677 TRIM26Q12899 539 aaPredicted RBP24.64■■□□□ 1.54
CDK11B-201ENST00000340677 RANGAP1P46060 587 aaPredicted RBP24.63■■□□□ 1.53
CDK11B-201ENST00000340677 ARXQ96QS3 562 aa24.62■■□□□ 1.53
CDK11B-201ENST00000340677 TARBP1Q13395 1621 aaKnown RBP24.59■■□□□ 1.53
CDK11B-201ENST00000340677 RAD54L2Q9Y4B4 1467 aa24.59■■□□□ 1.53
CDK11B-201ENST00000340677 THOC2Q8NI27 1593 aaKnown RBP24.57■■□□□ 1.52
CDK11B-201ENST00000340677 DIEXFQ68CQ4 756 aaKnown RBP24.57■■□□□ 1.52
CDK11B-201ENST00000340677 ABCA5Q8WWZ7 1642 aa24.56■■□□□ 1.52
CDK11B-201ENST00000340677 DEKP35659 375 aaKnown RBP24.56■■□□□ 1.52
CDK11B-201ENST00000340677 RAPGEF2Q9Y4G8 1499 aa24.55■■□□□ 1.52
CDK11B-201ENST00000340677 IGF1RP08069 1367 aa24.54■■□□□ 1.52
CDK11B-201ENST00000340677 CUL7Q14999 1698 aa24.53■■□□□ 1.52
CDK11B-201ENST00000340677 MYT1LQ9UL68 1186 aa24.5■■□□□ 1.51
CDK11B-201ENST00000340677 CEP162Q5TB80 1403 aa24.49■■□□□ 1.51
CDK11B-201ENST00000340677 FGD1P98174 961 aa24.46■■□□□ 1.51
CDK11B-201ENST00000340677 SUPT16HQ9Y5B9 1047 aaKnown RBP24.46■■□□□ 1.51
CDK11B-201ENST00000340677 IFT140Q96RY7 1462 aa24.46■■□□□ 1.51
CDK11B-201ENST00000340677 UBTFP17480 764 aaKnown RBP24.45■■□□□ 1.51
CDK11B-201ENST00000340677 TIMELESSQ9UNS1 1208 aa24.44■■□□□ 1.5
CDK11B-201ENST00000340677 EHMT2Q96KQ7 1210 aa24.44■■□□□ 1.5
CDK11B-201ENST00000340677 YTHDC1Q96MU7 727 aaKnown RBP24.42■■□□□ 1.5
CDK11B-201ENST00000340677 BCL11BQ9C0K0 894 aaPredicted RBP24.42■■□□□ 1.5
CDK11B-201ENST00000340677 CARMIL1Q5VZK9 1371 aa24.42■■□□□ 1.5
CDK11B-201ENST00000340677 GAPVD1Q14C86 1478 aa24.41■■□□□ 1.5
CDK11B-201ENST00000340677 PBRM1Q86U86 1689 aa24.38■■□□□ 1.49
CDK11B-201ENST00000340677 A0A0U1RQG5 324 aaPredicted RBP24.37■■□□□ 1.49
CDK11B-201ENST00000340677 PLPPR3Q6T4P5 718 aa24.33■■□□□ 1.49
CDK11B-201ENST00000340677 TDRD9Q8NDG6 1382 aaKnown RBP24.31■■□□□ 1.48
CDK11B-201ENST00000340677 CLIP1P30622 1438 aa24.3■■□□□ 1.48
CDK11B-201ENST00000340677 MSH5O43196 834 aa24.3■■□□□ 1.48
CDK11B-201ENST00000340677 CLSPNQ9HAW4 1339 aa24.29■■□□□ 1.48
CDK11B-201ENST00000340677 ZMYND15Q9H091 742 aa24.27■■□□□ 1.48
CDK11B-201ENST00000340677 GRIN2BQ13224 1484 aa24.26■■□□□ 1.47
CDK11B-201ENST00000340677 CTTNBP2Q8WZ74 1663 aa24.25■■□□□ 1.47
CDK11B-201ENST00000340677 AAMPQ13685 434 aa24.23■■□□□ 1.47
CDK11B-201ENST00000340677 ADAMTS12P58397 1594 aa24.22■■□□□ 1.47
CDK11B-201ENST00000340677 EIF4G3O43432 1585 aaKnown RBP24.22■■□□□ 1.47
CDK11B-201ENST00000340677 RTN4Q9NQC3 1192 aaKnown RBP24.19■■□□□ 1.46
CDK11B-201ENST00000340677 RBM19Q9Y4C8 960 aaKnown RBP24.19■■□□□ 1.46
CDK11B-201ENST00000340677 FHAD1B1AJZ9 1412 aa24.18■■□□□ 1.46
CDK11B-201ENST00000340677 ZNF608Q9ULD9 1512 aaPredicted RBP24.18■■□□□ 1.46
CDK11B-201ENST00000340677 AQRO60306 1485 aaKnown RBP eCLIP24.18■■□□□ 1.464e-7■■■■■ 29.4
CDK11B-201ENST00000340677 IL27Q8NEV9 243 aa24.17■■□□□ 1.46
CDK11B-201ENST00000340677 VPS8Q8N3P4 1428 aa24.14■■□□□ 1.45
CDK11B-201ENST00000340677 RBM10P98175 930 aaKnown RBP24.12■■□□□ 1.45
CDK11B-201ENST00000340677 TAF7LQ5H9L4 462 aa24.1■■□□□ 1.45
CDK11B-201ENST00000340677 MAGI1Q96QZ7 1491 aaPredicted RBP24.09■■□□□ 1.45
CDK11B-201ENST00000340677 ARAP1Q96P48 1450 aa24.09■■□□□ 1.45
CDK11B-201ENST00000340677 EFCAB5A4FU69 1503 aa24.08■■□□□ 1.45
CDK11B-201ENST00000340677 ARHGAP35Q9NRY4 1499 aa24.08■■□□□ 1.45
CDK11B-201ENST00000340677 GLIPR1L2Q4G1C9 344 aa24.05■■□□□ 1.44
CDK11B-201ENST00000340677 SNAPC4Q5SXM2 1469 aa24.02■■□□□ 1.44
CDK11B-201ENST00000340677 VSIG10Q8N0Z9 540 aa24.01■■□□□ 1.43
CDK11B-201ENST00000340677 SAMD9Q5K651 1589 aa23.97■■□□□ 1.43
CDK11B-201ENST00000340677 SYNJ2O15056 1496 aa23.96■■□□□ 1.43
CDK11B-201ENST00000340677 GRIN2AQ12879 1464 aa23.95■■□□□ 1.42
CDK11B-201ENST00000340677 IQGAP2Q13576 1575 aa23.93■■□□□ 1.42
CDK11B-201ENST00000340677 KIAA0586Q9BVV6 1533 aa23.87■■□□□ 1.41
CDK11B-201ENST00000340677 MAP3K1Q13233 1512 aa23.86■■□□□ 1.41
CDK11B-201ENST00000340677 RSPH6AQ9H0K4 717 aa23.86■■□□□ 1.41
CDK11B-201ENST00000340677 UGGT2Q9NYU1 1516 aa23.86■■□□□ 1.41
CDK11B-201ENST00000340677 TULP1O00294 542 aaPredicted RBP23.84■■□□□ 1.41
CDK11B-201ENST00000340677 NUP160Q12769 1436 aa23.81■■□□□ 1.4
CDK11B-201ENST00000340677 FMN1Q68DA7 1419 aa23.79■■□□□ 1.4
CDK11B-201ENST00000340677 CEP170Q5SW79 1584 aa23.79■■□□□ 1.4
CDK11B-201ENST00000340677 FANCIQ9NVI1 1328 aa23.78■■□□□ 1.4
CDK11B-201ENST00000340677 DHX37Q8IY37 1157 aaKnown RBP23.78■■□□□ 1.4
CDK11B-201ENST00000340677 FYCO1Q9BQS8 1478 aa23.77■■□□□ 1.4
CDK11B-201ENST00000340677 FHOD3Q2V2M9 1422 aa23.76■■□□□ 1.39
CDK11B-201ENST00000340677 PCF11O94913 1555 aaKnown RBP23.75■■□□□ 1.39
CDK11B-201ENST00000340677 CHMP7Q8WUX9 453 aaPredicted RBP23.75■■□□□ 1.39
CDK11B-201ENST00000340677 CFAP43Q8NDM7 1665 aa23.75■■□□□ 1.39
CDK11B-201ENST00000340677 CASKIN1Q8WXD9 1431 aa23.74■■□□□ 1.39
CDK11B-201ENST00000340677 PAXIP1Q6ZW49 1069 aaPredicted RBP23.74■■□□□ 1.39
CDK11B-201ENST00000340677 HOMEZQ8IX15 550 aa23.74■■□□□ 1.39
CDK11B-201ENST00000340677 CHMP4AQ9BY43 222 aa23.73■■□□□ 1.39
CDK11B-201ENST00000340677 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.72■■□□□ 1.39
CDK11B-201ENST00000340677 MIER1Q8N108 512 aa23.72■■□□□ 1.39
CDK11B-201ENST00000340677 TIAM1Q13009 1591 aa23.72■■□□□ 1.39
CDK11B-201ENST00000340677 CHD1O14646 1710 aa23.71■■□□□ 1.39
CDK11B-201ENST00000340677 KIAA0556O60303 1618 aa23.69■■□□□ 1.38
CDK11B-201ENST00000340677 DISP1Q96F81 1524 aa23.65■■□□□ 1.38
CDK11B-201ENST00000340677 CCER1Q8TC90 406 aaPredicted RBP23.62■■□□□ 1.37
CDK11B-201ENST00000340677 P3H3Q8IVL6 736 aa23.61■■□□□ 1.37
CDK11B-201ENST00000340677 HECW1Q76N89 1606 aa23.58■■□□□ 1.37
CDK11B-201ENST00000340677 BRD2P25440 801 aaKnown RBP23.57■■□□□ 1.36
CDK11B-201ENST00000340677 OSCARQ8IYS5 282 aa23.57■■□□□ 1.36
CDK11B-201ENST00000340677 LRRC9Q6ZRR7 1453 aa23.57■■□□□ 1.36
CDK11B-201ENST00000340677 LRRIQ1Q96JM4 1722 aa23.57■■□□□ 1.36
CDK11B-201ENST00000340677 RSPH4AQ5TD94 716 aa23.56■■□□□ 1.36
CDK11B-201ENST00000340677 FBLN2P98095 1184 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms