RNA–Protein interactions for RNA: ENST00000339530.8

LST1-203, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 635 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-203ENST00000339530 CYB5RLQ6IPT4 315 aa17.52■□□□□ 0.4
LST1-203ENST00000339530 AQRO60306 1485 aaKnown RBP eCLIP17.51■□□□□ 0.39
LST1-203ENST00000339530 MAGI1Q96QZ7 1491 aaPredicted RBP17.5■□□□□ 0.39
LST1-203ENST00000339530 EFCAB5A4FU69 1503 aa17.5■□□□□ 0.39
LST1-203ENST00000339530 VPS8Q8N3P4 1428 aa17.49■□□□□ 0.39
LST1-203ENST00000339530 CHD1O14646 1710 aa17.49■□□□□ 0.39
LST1-203ENST00000339530 FBLN2P98095 1184 aa17.47■□□□□ 0.39
LST1-203ENST00000339530 SNAPC4Q5SXM2 1469 aa17.45■□□□□ 0.38
LST1-203ENST00000339530 ARAP1Q96P48 1450 aa17.45■□□□□ 0.38
LST1-203ENST00000339530 ARHGAP35Q9NRY4 1499 aa17.44■□□□□ 0.38
LST1-203ENST00000339530 TRHP20396 242 aaPredicted RBP17.4■□□□□ 0.38
LST1-203ENST00000339530 SAMD9Q5K651 1589 aa17.4■□□□□ 0.38
LST1-203ENST00000339530 SYNJ2O15056 1496 aa17.39■□□□□ 0.37
LST1-203ENST00000339530 IQGAP2Q13576 1575 aa17.39■□□□□ 0.37
LST1-203ENST00000339530 GRIN2AQ12879 1464 aa17.38■□□□□ 0.37
LST1-203ENST00000339530 CHMP7Q8WUX9 453 aaPredicted RBP17.35■□□□□ 0.37
LST1-203ENST00000339530 CLASP1Q7Z460 1538 aa17.31■□□□□ 0.36
LST1-203ENST00000339530 KIAA0586Q9BVV6 1533 aa17.31■□□□□ 0.36
LST1-203ENST00000339530 UGGT2Q9NYU1 1516 aa17.31■□□□□ 0.36
LST1-203ENST00000339530 TRIM26Q12899 539 aaPredicted RBP17.3■□□□□ 0.36
LST1-203ENST00000339530 MAP3K1Q13233 1512 aa17.28■□□□□ 0.36
LST1-203ENST00000339530 NUP160Q12769 1436 aa17.28■□□□□ 0.36
LST1-203ENST00000339530 CEP170Q5SW79 1584 aa17.28■□□□□ 0.36
LST1-203ENST00000339530 CFAP43Q8NDM7 1665 aa17.26■□□□□ 0.35
LST1-203ENST00000339530 FMN1Q68DA7 1419 aa17.26■□□□□ 0.35
LST1-203ENST00000339530 FYCO1Q9BQS8 1478 aa17.25■□□□□ 0.35
LST1-203ENST00000339530 PCF11O94913 1555 aaKnown RBP17.25■□□□□ 0.35
LST1-203ENST00000339530 RANGAP1P46060 587 aaPredicted RBP17.25■□□□□ 0.35
LST1-203ENST00000339530 APLP2Q06481 763 aa17.23■□□□□ 0.35
LST1-203ENST00000339530 FHOD3Q2V2M9 1422 aa17.22■□□□□ 0.35
LST1-203ENST00000339530 KIAA0556O60303 1618 aa17.22■□□□□ 0.35
LST1-203ENST00000339530 TIAM1Q13009 1591 aa17.21■□□□□ 0.35
LST1-203ENST00000339530 CASKIN1Q8WXD9 1431 aa17.2■□□□□ 0.34
LST1-203ENST00000339530 PCGF6Q9BYE7 350 aa17.16■□□□□ 0.34
LST1-203ENST00000339530 HECW1Q76N89 1606 aa17.15■□□□□ 0.34
LST1-203ENST00000339530 DISP1Q96F81 1524 aa17.14■□□□□ 0.33
LST1-203ENST00000339530 SHROOM2Q13796 1616 aa17.11■□□□□ 0.33
LST1-203ENST00000339530 CCDC18Q5T9S5 1454 aa17.1■□□□□ 0.33
LST1-203ENST00000339530 LRRIQ1Q96JM4 1722 aa17.1■□□□□ 0.33
LST1-203ENST00000339530 AEBP2Q6ZN18 517 aaPredicted RBP17.09■□□□□ 0.33
LST1-203ENST00000339530 CARMIL2Q6F5E8 1435 aa17.09■□□□□ 0.33
LST1-203ENST00000339530 LRRC9Q6ZRR7 1453 aa17.06■□□□□ 0.32
LST1-203ENST00000339530 P3H3Q8IVL6 736 aa17.06■□□□□ 0.32
LST1-203ENST00000339530 RAPGEF6Q8TEU7 1601 aa17.05■□□□□ 0.32
LST1-203ENST00000339530 PPARGC1BQ86YN6 1023 aaKnown RBP17.04■□□□□ 0.32
LST1-203ENST00000339530 EHBP1L1Q8N3D4 1523 aa17.02■□□□□ 0.32
LST1-203ENST00000339530 JPH4Q96JJ6 628 aa16.99■□□□□ 0.31
LST1-203ENST00000339530 SUPT6HQ7KZ85 1726 aaKnown RBP16.98■□□□□ 0.31
LST1-203ENST00000339530 RRBP1Q9P2E9 1410 aaKnown RBP16.97■□□□□ 0.31
LST1-203ENST00000339530 EPRSP07814 1512 aaKnown RBP16.97■□□□□ 0.31
LST1-203ENST00000339530 KANK4Q5T7N3 995 aaPredicted RBP16.97■□□□□ 0.31
LST1-203ENST00000339530 ABCA8O94911 1581 aa16.95■□□□□ 0.3
LST1-203ENST00000339530 ERCC6L2Q5T890 1561 aa16.95■□□□□ 0.3
LST1-203ENST00000339530 PRG4Q92954 1404 aaPredicted RBP16.94■□□□□ 0.3
LST1-203ENST00000339530 TTBK1Q5TCY1 1321 aaPredicted RBP16.94■□□□□ 0.3
LST1-203ENST00000339530 NUP153P49790 1475 aaKnown RBP16.93■□□□□ 0.3
LST1-203ENST00000339530 MTUS2Q5JR59 1369 aa16.9■□□□□ 0.3
LST1-203ENST00000339530 ATP1B4Q9UN42 357 aaPredicted RBP16.89■□□□□ 0.29
LST1-203ENST00000339530 CDK13Q14004 1512 aaKnown RBP16.89■□□□□ 0.29
LST1-203ENST00000339530 ADCY10Q96PN6 1610 aa16.87■□□□□ 0.29
LST1-203ENST00000339530 CCNB3Q8WWL7 1395 aa16.87■□□□□ 0.29
LST1-203ENST00000339530 PLB1Q6P1J6 1458 aa16.86■□□□□ 0.29
LST1-203ENST00000339530 MAGI3Q5TCQ9 1506 aa16.86■□□□□ 0.29
LST1-203ENST00000339530 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.85■□□□□ 0.29
LST1-203ENST00000339530 NCOA2Q15596 1464 aa16.85■□□□□ 0.29
LST1-203ENST00000339530 PTPRGP23470 1445 aa16.84■□□□□ 0.29
LST1-203ENST00000339530 NPM1P06748 294 aaKnown RBP eCLIP16.83■□□□□ 0.28
LST1-203ENST00000339530 PHLDB1Q86UU1 1377 aa16.83■□□□□ 0.28
LST1-203ENST00000339530 KIF13AQ9H1H9 1805 aa16.81■□□□□ 0.28
LST1-203ENST00000339530 ITSN2Q9NZM3 1697 aa16.81■□□□□ 0.28
LST1-203ENST00000339530 ABCC2Q92887 1545 aa16.8■□□□□ 0.28
LST1-203ENST00000339530 MYOM3Q5VTT5 1437 aa16.8■□□□□ 0.28
LST1-203ENST00000339530 CDK11AQ9UQ88 783 aaPredicted RBP16.8■□□□□ 0.28
LST1-203ENST00000339530 UACAQ9BZF9 1416 aa16.79■□□□□ 0.28
LST1-203ENST00000339530 TROQ12816 1431 aaPredicted RBP16.79■□□□□ 0.28
LST1-203ENST00000339530 FGD6Q6ZV73 1430 aa16.79■□□□□ 0.28
LST1-203ENST00000339530 UHRF1BP1LA0JNW5 1464 aa16.78■□□□□ 0.28
LST1-203ENST00000339530 ABCC10Q5T3U5 1492 aa16.76■□□□□ 0.27
LST1-203ENST00000339530 HRCP23327 699 aa16.76■□□□□ 0.27
LST1-203ENST00000339530 KIF14Q15058 1648 aa16.76■□□□□ 0.27
LST1-203ENST00000339530 PTPN23Q9H3S7 1636 aa16.76■□□□□ 0.27
LST1-203ENST00000339530 MAPKBP1O60336 1514 aa16.75■□□□□ 0.27
LST1-203ENST00000339530 FAM69CQ0P6D2 419 aa16.75■□□□□ 0.27
LST1-203ENST00000339530 MIA2Q96PC5 1412 aa16.75■□□□□ 0.27
LST1-203ENST00000339530 ATP10BO94823 1461 aa16.74■□□□□ 0.27
LST1-203ENST00000339530 TCOF1Q13428 1488 aaKnown RBP16.74■□□□□ 0.27
LST1-203ENST00000339530 ZCCHC11Q5TAX3 1644 aaKnown RBP16.7■□□□□ 0.26
LST1-203ENST00000339530 ZEB1P37275 1124 aaPredicted RBP16.69■□□□□ 0.26
LST1-203ENST00000339530 KDM5BQ9UGL1 1544 aa16.68■□□□□ 0.26
LST1-203ENST00000339530 DIP2BQ9P265 1576 aa16.67■□□□□ 0.26
LST1-203ENST00000339530 CDC42BPAQ5VT25 1732 aa16.67■□□□□ 0.26
LST1-203ENST00000339530 HNRNPUL2Q1KMD3 747 aaKnown RBP16.66■□□□□ 0.26
LST1-203ENST00000339530 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.65■□□□□ 0.26
LST1-203ENST00000339530 PLEKHD1A6NEE1 506 aa16.64■□□□□ 0.25
LST1-203ENST00000339530 PREX2Q70Z35 1606 aa16.63■□□□□ 0.25
LST1-203ENST00000339530 ARID3CA6NKF2 412 aa16.62■□□□□ 0.25
LST1-203ENST00000339530 DNMT1P26358 1616 aaKnown RBP16.62■□□□□ 0.25
LST1-203ENST00000339530 KDM6BO15054 1643 aa16.61■□□□□ 0.25
LST1-203ENST00000339530 FAM50AQ14320 339 aaKnown RBP16.61■□□□□ 0.25
LST1-203ENST00000339530 GCC2Q8IWJ2 1684 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms