RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 ATAD2BQ9ULI0 1458 aa13.06□□□□□ -0.32
RPGR-202ENST00000339363 BAZ1BQ9UIG0 1483 aaKnown RBP13.02□□□□□ -0.32
RPGR-202ENST00000339363 DDX10Q13206 875 aaKnown RBP13.01□□□□□ -0.33
RPGR-202ENST00000339363 TRIM52Q96A61 297 aa13.01□□□□□ -0.33
RPGR-202ENST00000339363 MAPKBP1O60336 1514 aa13.01□□□□□ -0.33
RPGR-202ENST00000339363 PEG3Q9GZU2 1588 aa13□□□□□ -0.33
RPGR-202ENST00000339363 PRXQ9BXM0 1461 aa13□□□□□ -0.33
RPGR-202ENST00000339363 IRX6P78412 446 aaPredicted RBP12.99□□□□□ -0.33
RPGR-202ENST00000339363 RAB3GAP2Q9H2M9 1393 aa12.98□□□□□ -0.33
RPGR-202ENST00000339363 TOP2BQ02880 1626 aa12.98□□□□□ -0.33
RPGR-202ENST00000339363 RRBP1Q9P2E9 1410 aaKnown RBP12.97□□□□□ -0.33
RPGR-202ENST00000339363 ERICH6BQ5W0A0 696 aa12.96□□□□□ -0.33
RPGR-202ENST00000339363 ARHGAP35Q9NRY4 1499 aa12.96□□□□□ -0.33
RPGR-202ENST00000339363 WDR97A6NE52 1622 aa12.96□□□□□ -0.33
RPGR-202ENST00000339363 CCNB3Q8WWL7 1395 aa12.95□□□□□ -0.34
RPGR-202ENST00000339363 CUX1P39880 1505 aa12.94□□□□□ -0.34
RPGR-202ENST00000339363 P3H3Q8IVL6 736 aa12.94□□□□□ -0.34
RPGR-202ENST00000339363 UBE2Q2Q8WVN8 375 aa12.92□□□□□ -0.34
RPGR-202ENST00000339363 HMGXB3Q12766 1538 aa12.92□□□□□ -0.34
RPGR-202ENST00000339363 IL27Q8NEV9 243 aa12.92□□□□□ -0.34
RPGR-202ENST00000339363 CUX2O14529 1486 aa12.91□□□□□ -0.34
RPGR-202ENST00000339363 FANCIQ9NVI1 1328 aa12.91□□□□□ -0.34
RPGR-202ENST00000339363 PHLDB1Q86UU1 1377 aa12.91□□□□□ -0.34
RPGR-202ENST00000339363 NCAPD3P42695 1498 aa12.89□□□□□ -0.35
RPGR-202ENST00000339363 NOP58Q9Y2X3 529 aaKnown RBP12.89□□□□□ -0.35
RPGR-202ENST00000339363 PPP1R15AO75807 674 aaPredicted RBP12.88□□□□□ -0.35
RPGR-202ENST00000339363 BIVM-ERCC5R4GMW8 1640 aa12.87□□□□□ -0.35
RPGR-202ENST00000339363 FAM50AQ14320 339 aaKnown RBP12.86□□□□□ -0.35
RPGR-202ENST00000339363 ERICH3Q5RHP9 1530 aa12.85□□□□□ -0.35
RPGR-202ENST00000339363 ANP32AP39687 249 aaKnown RBP12.84□□□□□ -0.35
RPGR-202ENST00000339363 ATP1B4Q9UN42 357 aaPredicted RBP12.84□□□□□ -0.35
RPGR-202ENST00000339363 PKNOX2Q96KN3 472 aa12.83□□□□□ -0.36
RPGR-202ENST00000339363 ZBTB47Q9UFB7 747 aaPredicted RBP12.81□□□□□ -0.36
RPGR-202ENST00000339363 IGF1RP08069 1367 aa12.8□□□□□ -0.36
RPGR-202ENST00000339363 ANP32CO43423 234 aa12.79□□□□□ -0.36
RPGR-202ENST00000339363 KIF27Q86VH2 1401 aa12.79□□□□□ -0.36
RPGR-202ENST00000339363 SETD5Q9C0A6 1442 aa12.78□□□□□ -0.36
RPGR-202ENST00000339363 GLIPR1L2Q4G1C9 344 aa12.78□□□□□ -0.36
RPGR-202ENST00000339363 CCDC184Q52MB2 194 aa12.77□□□□□ -0.37
RPGR-202ENST00000339363 NPM2Q86SE8 214 aaKnown RBP12.77□□□□□ -0.37
RPGR-202ENST00000339363 TIAM1Q13009 1591 aa12.76□□□□□ -0.37
RPGR-202ENST00000339363 HNRNPUQ00839 825 aaKnown RBP eCLIP12.76□□□□□ -0.37
RPGR-202ENST00000339363 LRRC9Q6ZRR7 1453 aa12.75□□□□□ -0.37
RPGR-202ENST00000339363 PTPRKQ15262 1439 aa12.74□□□□□ -0.37
RPGR-202ENST00000339363 TIMELESSQ9UNS1 1208 aa12.74□□□□□ -0.37
RPGR-202ENST00000339363 SENP3-EIF4A1A0A087X0R7 540 aa12.73□□□□□ -0.37
RPGR-202ENST00000339363 PAK3O75914 559 aaPredicted RBP12.73□□□□□ -0.37
RPGR-202ENST00000339363 B4GALNT3Q6L9W6 998 aa12.72□□□□□ -0.37
RPGR-202ENST00000339363 AQRO60306 1485 aaKnown RBP eCLIP12.72□□□□□ -0.379e-8■■■□□ 18.2
RPGR-202ENST00000339363 FHOD3Q2V2M9 1422 aa12.72□□□□□ -0.37
RPGR-202ENST00000339363 LAS1LQ9Y4W2 734 aaKnown RBP12.71□□□□□ -0.38
RPGR-202ENST00000339363 PCF11O94913 1555 aaKnown RBP12.69□□□□□ -0.38
RPGR-202ENST00000339363 NEFMP07197 916 aa12.69□□□□□ -0.38
RPGR-202ENST00000339363 LAMC3Q9Y6N6 1575 aa12.69□□□□□ -0.38
RPGR-202ENST00000339363 CARMIL1Q5VZK9 1371 aa12.68□□□□□ -0.38
RPGR-202ENST00000339363 CFTRP13569 1480 aa12.68□□□□□ -0.38
RPGR-202ENST00000339363 C11orf95C9JLR9 678 aaPredicted RBP12.66□□□□□ -0.38
RPGR-202ENST00000339363 PPP4R2Q9NY27 417 aa12.66□□□□□ -0.38
RPGR-202ENST00000339363 VSIG10Q8N0Z9 540 aa12.65□□□□□ -0.38
RPGR-202ENST00000339363 PODXL2Q9NZ53 605 aa12.65□□□□□ -0.38
RPGR-202ENST00000339363 FOXD1Q16676 465 aa12.64□□□□□ -0.39
RPGR-202ENST00000339363 KDM5BQ9UGL1 1544 aa12.64□□□□□ -0.39
RPGR-202ENST00000339363 DNAJC5Q9H3Z4 198 aa12.64□□□□□ -0.39
RPGR-202ENST00000339363 FGD5Q6ZNL6 1462 aa12.63□□□□□ -0.39
RPGR-202ENST00000339363 DAXXQ9UER7 740 aaPredicted RBP12.63□□□□□ -0.39
RPGR-202ENST00000339363 RAD54L2Q9Y4B4 1467 aa12.63□□□□□ -0.39
RPGR-202ENST00000339363 THOC2Q8NI27 1593 aaKnown RBP12.62□□□□□ -0.39
RPGR-202ENST00000339363 WASHC2AQ641Q2 1341 aa12.62□□□□□ -0.39
RPGR-202ENST00000339363 CNGB1Q14028 1251 aaPredicted RBP12.61□□□□□ -0.39
RPGR-202ENST00000339363 IPO9Q96P70 1041 aaKnown RBP12.6□□□□□ -0.39
RPGR-202ENST00000339363 CHIC2Q9UKJ5 165 aa12.6□□□□□ -0.39
RPGR-202ENST00000339363 PLEKHG5O94827 1062 aa12.6□□□□□ -0.39
RPGR-202ENST00000339363 BRPF3Q9ULD4 1205 aa12.6□□□□□ -0.39
RPGR-202ENST00000339363 DENND4BO75064 1496 aaPredicted RBP12.6□□□□□ -0.39
RPGR-202ENST00000339363 CCER2I3L3R5 266 aa12.59□□□□□ -0.39
RPGR-202ENST00000339363 ARID3CA6NKF2 412 aa12.58□□□□□ -0.4
RPGR-202ENST00000339363 RRP7BPQ9NSQ0 103 aa12.58□□□□□ -0.4
RPGR-202ENST00000339363 TONSLQ96HA7 1378 aa12.56□□□□□ -0.4
RPGR-202ENST00000339363 HSPA5P11021 654 aaKnown RBP12.56□□□□□ -0.4
RPGR-202ENST00000339363 CCDC18Q5T9S5 1454 aa12.56□□□□□ -0.4
RPGR-202ENST00000339363 CFAP43Q8NDM7 1665 aa12.55□□□□□ -0.4
RPGR-202ENST00000339363 KDM6BO15054 1643 aa12.55□□□□□ -0.4
RPGR-202ENST00000339363 LRRIQ1Q96JM4 1722 aa12.55□□□□□ -0.4
RPGR-202ENST00000339363 MAP3K1Q13233 1512 aa12.55□□□□□ -0.4
RPGR-202ENST00000339363 FGD6Q6ZV73 1430 aa12.54□□□□□ -0.4
RPGR-202ENST00000339363 NAIPQ13075 1403 aa12.53□□□□□ -0.4
RPGR-202ENST00000339363 FAM9BQ8IZU0 186 aa12.53□□□□□ -0.4
RPGR-202ENST00000339363 SLC24A1O60721 1099 aa12.52□□□□□ -0.4
RPGR-202ENST00000339363 RSPH6AQ9H0K4 717 aa12.52□□□□□ -0.41
RPGR-202ENST00000339363 NESP48681 1621 aa12.5□□□□□ -0.41
RPGR-202ENST00000339363 PTPN23Q9H3S7 1636 aa12.5□□□□□ -0.41
RPGR-202ENST00000339363 PPM1GO15355 546 aaPredicted RBP12.5□□□□□ -0.41
RPGR-202ENST00000339363 CADPSQ9ULU8 1353 aa12.49□□□□□ -0.41
RPGR-202ENST00000339363 MAGI3Q5TCQ9 1506 aa12.49□□□□□ -0.41
RPGR-202ENST00000339363 SNAPC4Q5SXM2 1469 aa12.49□□□□□ -0.41
RPGR-202ENST00000339363 NBPF8Q3BBV2 869 aa12.49□□□□□ -0.41
RPGR-202ENST00000339363 ZMYND15Q9H091 742 aa12.48□□□□□ -0.41
RPGR-202ENST00000339363 HFM1A2PYH4 1435 aa12.48□□□□□ -0.41
RPGR-202ENST00000339363 FHAD1B1AJZ9 1412 aa12.48□□□□□ -0.41
RPGR-202ENST00000339363 PRDM2Q13029 1718 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms