RNA–Protein interactions for RNA: ENST00000338179.6

LBR-202, Transcript of lamin B receptor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LBR, Length 3,812 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-202ENST00000338179 MROH2BQ7Z745 1585 aa6.11□□□□□ -1.43
LBR-202ENST00000338179 SMARCA2P51531 1590 aa6.1□□□□□ -1.43
LBR-202ENST00000338179 WIZO95785 1651 aa6.09□□□□□ -1.43
LBR-202ENST00000338179 TRIM41Q8WV44 630 aa6.09□□□□□ -1.43
LBR-202ENST00000338179 CIZ1Q9ULV3 898 aaPredicted RBP6.09□□□□□ -1.43
LBR-202ENST00000338179 KIF21BO75037 1637 aa6.09□□□□□ -1.43
LBR-202ENST00000338179 MKRN4PQ13434 485 aaPredicted RBP6.09□□□□□ -1.43
LBR-202ENST00000338179 NCAPD3P42695 1498 aa6.09□□□□□ -1.44
LBR-202ENST00000338179 HMGXB3Q12766 1538 aa6.08□□□□□ -1.44
LBR-202ENST00000338179 ZNF219Q9P2Y4 722 aaPredicted RBP6.08□□□□□ -1.44
LBR-202ENST00000338179 CUX2O14529 1486 aa6.08□□□□□ -1.44
LBR-202ENST00000338179 EEA1Q15075 1411 aa6.07□□□□□ -1.44
LBR-202ENST00000338179 ZEB1P37275 1124 aaPredicted RBP6.07□□□□□ -1.44
LBR-202ENST00000338179 TRIM26Q12899 539 aaPredicted RBP6.06□□□□□ -1.44
LBR-202ENST00000338179 U3KPZ7 1027 aaPredicted RBP6.06□□□□□ -1.44
LBR-202ENST00000338179 ARID3AQ99856 593 aa6.06□□□□□ -1.44
LBR-202ENST00000338179 PRDM2Q13029 1718 aa6.06□□□□□ -1.44
LBR-202ENST00000338179 RANGAP1P46060 587 aaPredicted RBP6.05□□□□□ -1.44
LBR-202ENST00000338179 PLCD3Q8N3E9 789 aa6.05□□□□□ -1.44
LBR-202ENST00000338179 BIVM-ERCC5R4GMW8 1640 aa6.04□□□□□ -1.44
LBR-202ENST00000338179 SAMD1Q6SPF0 538 aaPredicted RBP6.03□□□□□ -1.44
LBR-202ENST00000338179 TRHP20396 242 aaPredicted RBP6.03□□□□□ -1.44
LBR-202ENST00000338179 UBTFP17480 764 aaKnown RBP6.02□□□□□ -1.45
LBR-202ENST00000338179 BAZ1BQ9UIG0 1483 aaKnown RBP6□□□□□ -1.45
LBR-202ENST00000338179 SPOCK2Q92563 424 aa6□□□□□ -1.45
LBR-202ENST00000338179 DNAJC5Q9H3Z4 198 aa6□□□□□ -1.45
LBR-202ENST00000338179 ATAD2BQ9ULI0 1458 aa6□□□□□ -1.45
LBR-202ENST00000338179 THOC2Q8NI27 1593 aaKnown RBP5.98□□□□□ -1.45
LBR-202ENST00000338179 LAMC3Q9Y6N6 1575 aa5.97□□□□□ -1.45
LBR-202ENST00000338179 ERICH3Q5RHP9 1530 aa5.97□□□□□ -1.45
LBR-202ENST00000338179 MIER1Q8N108 512 aa5.96□□□□□ -1.45
LBR-202ENST00000338179 TNIKQ9UKE5 1360 aa5.96□□□□□ -1.45
LBR-202ENST00000338179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.95□□□□□ -1.46
LBR-202ENST00000338179 HNRNPUL2Q1KMD3 747 aaKnown RBP5.95□□□□□ -1.46
LBR-202ENST00000338179 TOP2BQ02880 1626 aa5.95□□□□□ -1.46
LBR-202ENST00000338179 CCDC88BA6NC98 1476 aa5.94□□□□□ -1.46
LBR-202ENST00000338179 POLA2Q14181 598 aa5.94□□□□□ -1.46
LBR-202ENST00000338179 NEUROD2Q15784 382 aa5.94□□□□□ -1.46
LBR-202ENST00000338179 MAP3K1Q13233 1512 aa5.94□□□□□ -1.46
LBR-202ENST00000338179 SYNJ1O43426 1573 aa5.93□□□□□ -1.46
LBR-202ENST00000338179 ABCB7O75027 752 aa5.9□□□□□ -1.46
LBR-202ENST00000338179 PROM2Q8N271 834 aa5.9□□□□□ -1.46
LBR-202ENST00000338179 SPINK5Q9NQ38 1064 aaPredicted RBP5.9□□□□□ -1.46
LBR-202ENST00000338179 NKX1-1Q15270 411 aaPredicted RBP5.9□□□□□ -1.46
LBR-202ENST00000338179 RNF25Q96BH1 459 aaPredicted RBP5.89□□□□□ -1.47
LBR-202ENST00000338179 BRPF1P55201 1214 aaPredicted RBP5.89□□□□□ -1.47
LBR-202ENST00000338179 KIF21AQ7Z4S6 1674 aa5.89□□□□□ -1.47
LBR-202ENST00000338179 NPM2Q86SE8 214 aaKnown RBP5.89□□□□□ -1.47
LBR-202ENST00000338179 PCGF6Q9BYE7 350 aa5.88□□□□□ -1.47
LBR-202ENST00000338179 WDR62O43379 1518 aa5.88□□□□□ -1.47
LBR-202ENST00000338179 LMOD2Q6P5Q4 547 aa5.88□□□□□ -1.47
LBR-202ENST00000338179 STK25O00506 426 aa5.88□□□□□ -1.47
LBR-202ENST00000338179 GOLGA3Q08378 1498 aa5.87□□□□□ -1.47
LBR-202ENST00000338179 ERCC6Q03468 1493 aa5.87□□□□□ -1.47
LBR-202ENST00000338179 ARID3CA6NKF2 412 aa5.86□□□□□ -1.47
LBR-202ENST00000338179 CEP164Q9UPV0 1460 aa5.85□□□□□ -1.47
LBR-202ENST00000338179 CLSPNQ9HAW4 1339 aa5.85□□□□□ -1.47
LBR-202ENST00000338179 ERICH6Q7L0X2 663 aa5.85□□□□□ -1.47
LBR-202ENST00000338179 PRXQ9BXM0 1461 aa5.85□□□□□ -1.47
LBR-202ENST00000338179 ABCC8Q09428 1581 aa5.85□□□□□ -1.47
LBR-202ENST00000338179 CEP162Q5TB80 1403 aa5.85□□□□□ -1.47
LBR-202ENST00000338179 NESP48681 1621 aa5.84□□□□□ -1.47
LBR-202ENST00000338179 CFAP43Q8NDM7 1665 aa5.84□□□□□ -1.47
LBR-202ENST00000338179 PDS5BQ9NTI5 1447 aa5.84□□□□□ -1.48
LBR-202ENST00000338179 CAPN15O75808 1086 aa5.83□□□□□ -1.48
LBR-202ENST00000338179 LOC105371045A0A1W2PR82 267 aa5.83□□□□□ -1.48
LBR-202ENST00000338179 SLC24A3Q9HC58 644 aa5.83□□□□□ -1.48
LBR-202ENST00000338179 RRBP1Q9P2E9 1410 aaKnown RBP5.82□□□□□ -1.48
LBR-202ENST00000338179 MRC2Q9UBG0 1479 aa5.82□□□□□ -1.48
LBR-202ENST00000338179 KCNV2Q8TDN2 545 aa5.82□□□□□ -1.48
LBR-202ENST00000338179 PPARGC1BQ86YN6 1023 aaKnown RBP5.81□□□□□ -1.48
LBR-202ENST00000338179 CADPSQ9ULU8 1353 aa5.81□□□□□ -1.48
LBR-202ENST00000338179 GTPBP6O43824 516 aaPredicted RBP5.81□□□□□ -1.48
LBR-202ENST00000338179 VPS8Q8N3P4 1428 aa5.8□□□□□ -1.48
LBR-202ENST00000338179 ZNF692Q9BU19 519 aaPredicted RBP5.8□□□□□ -1.48
LBR-202ENST00000338179 GPBP1L1Q9HC44 474 aaPredicted RBP5.8□□□□□ -1.48
LBR-202ENST00000338179 WDR97A6NE52 1622 aa5.8□□□□□ -1.48
LBR-202ENST00000338179 CFTRP13569 1480 aa5.8□□□□□ -1.48
LBR-202ENST00000338179 HS6ST3Q8IZP7 471 aa5.8□□□□□ -1.48
LBR-202ENST00000338179 STK24Q9Y6E0 443 aa5.78□□□□□ -1.48
LBR-202ENST00000338179 OSCARQ8IYS5 282 aa5.78□□□□□ -1.48
LBR-202ENST00000338179 APLP2Q06481 763 aa5.78□□□□□ -1.48
LBR-202ENST00000338179 IL27Q8NEV9 243 aa5.77□□□□□ -1.49
LBR-202ENST00000338179 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.77□□□□□ -1.492e-6■□□□□ 8.8
LBR-202ENST00000338179 BCL11BQ9C0K0 894 aaPredicted RBP5.77□□□□□ -1.49
LBR-202ENST00000338179 ARAP1Q96P48 1450 aa5.76□□□□□ -1.49
LBR-202ENST00000338179 SOGA1O94964 1423 aa5.76□□□□□ -1.49
LBR-202ENST00000338179 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.75□□□□□ -1.49
LBR-202ENST00000338179 CLIP1P30622 1438 aa5.75□□□□□ -1.49
LBR-202ENST00000338179 POLR1AO95602 1720 aaPredicted RBP5.75□□□□□ -1.49
LBR-202ENST00000338179 AQRO60306 1485 aaKnown RBP eCLIP5.75□□□□□ -1.493e-7■■■■□ 23.2
LBR-202ENST00000338179 RUSC2Q8N2Y8 1516 aa5.74□□□□□ -1.49
LBR-202ENST00000338179 ACIN1Q9UKV3 1341 aaKnown RBP5.74□□□□□ -1.49
LBR-202ENST00000338179 DCAF8Q5TAQ9 597 aa5.74□□□□□ -1.49
LBR-202ENST00000338179 WDR70Q9NW82 654 aa5.74□□□□□ -1.49
LBR-202ENST00000338179 SEMA3EO15041 775 aa5.73□□□□□ -1.49
LBR-202ENST00000338179 CADPS2Q86UW7 1296 aa5.73□□□□□ -1.49
LBR-202ENST00000338179 FANCD2Q9BXW9 1451 aa5.73□□□□□ -1.49
LBR-202ENST00000338179 C1orf115Q9H7X2 142 aa5.72□□□□□ -1.49
LBR-202ENST00000338179 CUX1P39880 1505 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms