RNA–Protein interactions for RNA: ENST00000334270.2

TTF1-201, Transcript of transcription termination factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TTF1, Length 3,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTF1-201ENST00000334270 THOC2Q8NI27 1593 aaKnown RBP13.69□□□□□ -0.22
TTF1-201ENST00000334270 PDS5BQ9NTI5 1447 aa13.69□□□□□ -0.22
TTF1-201ENST00000334270 SPINK5Q9NQ38 1064 aaPredicted RBP13.68□□□□□ -0.22
TTF1-201ENST00000334270 PBRM1Q86U86 1689 aa13.67□□□□□ -0.22
TTF1-201ENST00000334270 SPDYE4A6NLX3 237 aa13.67□□□□□ -0.22
TTF1-201ENST00000334270 HAP1P54257 671 aaPredicted RBP13.67□□□□□ -0.22
TTF1-201ENST00000334270 IFNLR1Q8IU57 520 aaPredicted RBP13.66□□□□□ -0.22
TTF1-201ENST00000334270 TRHP20396 242 aaPredicted RBP13.64□□□□□ -0.23
TTF1-201ENST00000334270 URB2Q14146 1524 aaKnown RBP13.64□□□□□ -0.23
TTF1-201ENST00000334270 FGD5Q6ZNL6 1462 aa13.64□□□□□ -0.23
TTF1-201ENST00000334270 KIF27Q86VH2 1401 aa13.62□□□□□ -0.23
TTF1-201ENST00000334270 MRC2Q9UBG0 1479 aa13.62□□□□□ -0.23
TTF1-201ENST00000334270 SOGA1O94964 1423 aa13.61□□□□□ -0.23
TTF1-201ENST00000334270 PLCB2Q00722 1185 aa13.61□□□□□ -0.23
TTF1-201ENST00000334270 POLA1P09884 1462 aaPredicted RBP13.59□□□□□ -0.23
TTF1-201ENST00000334270 SAMD1Q6SPF0 538 aaPredicted RBP13.58□□□□□ -0.23
TTF1-201ENST00000334270 MAP3K1Q13233 1512 aa13.58□□□□□ -0.24
TTF1-201ENST00000334270 EFCAB5A4FU69 1503 aa13.56□□□□□ -0.24
TTF1-201ENST00000334270 RUSC2Q8N2Y8 1516 aa13.54□□□□□ -0.24
TTF1-201ENST00000334270 VASPP50552 380 aaPredicted RBP13.54□□□□□ -0.24
TTF1-201ENST00000334270 ADAMTS12P58397 1594 aa13.52□□□□□ -0.25
TTF1-201ENST00000334270 SAMD9Q5K651 1589 aa13.52□□□□□ -0.25
TTF1-201ENST00000334270 NESP48681 1621 aa13.51□□□□□ -0.25
TTF1-201ENST00000334270 FBLN2P98095 1184 aa13.51□□□□□ -0.25
TTF1-201ENST00000334270 IFT140Q96RY7 1462 aa13.51□□□□□ -0.25
TTF1-201ENST00000334270 CFAP43Q8NDM7 1665 aa13.5□□□□□ -0.25
TTF1-201ENST00000334270 PKD2Q13563 968 aa13.5□□□□□ -0.25
TTF1-201ENST00000334270 POLA2Q14181 598 aa13.5□□□□□ -0.25
TTF1-201ENST00000334270 RAPGEF2Q9Y4G8 1499 aa13.48□□□□□ -0.25
TTF1-201ENST00000334270 CEP162Q5TB80 1403 aa13.47□□□□□ -0.25
TTF1-201ENST00000334270 ABCB7O75027 752 aa13.47□□□□□ -0.25
TTF1-201ENST00000334270 AQRO60306 1485 aaKnown RBP eCLIP13.46□□□□□ -0.25
TTF1-201ENST00000334270 CUX2O14529 1486 aa13.44□□□□□ -0.26
TTF1-201ENST00000334270 IGF1RP08069 1367 aa13.42□□□□□ -0.26
TTF1-201ENST00000334270 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.41□□□□□ -0.26
TTF1-201ENST00000334270 HNRNPUL2Q1KMD3 747 aaKnown RBP13.41□□□□□ -0.26
TTF1-201ENST00000334270 EIF4G3O43432 1585 aaKnown RBP13.4□□□□□ -0.26
TTF1-201ENST00000334270 VPS8Q8N3P4 1428 aa13.39□□□□□ -0.27
TTF1-201ENST00000334270 KDM2AQ9Y2K7 1162 aa13.38□□□□□ -0.27
TTF1-201ENST00000334270 ARAP1Q96P48 1450 aa13.38□□□□□ -0.27
TTF1-201ENST00000334270 NPM1P06748 294 aaKnown RBP eCLIP13.38□□□□□ -0.27
TTF1-201ENST00000334270 MAGI1Q96QZ7 1491 aaPredicted RBP13.36□□□□□ -0.27
TTF1-201ENST00000334270 GAPVD1Q14C86 1478 aa13.35□□□□□ -0.27
TTF1-201ENST00000334270 UGGT2Q9NYU1 1516 aa13.34□□□□□ -0.27
TTF1-201ENST00000334270 GRIN2BQ13224 1484 aa13.34□□□□□ -0.27
TTF1-201ENST00000334270 CAPN15O75808 1086 aa13.34□□□□□ -0.27
TTF1-201ENST00000334270 CFAP44Q96MT7 982 aa13.33□□□□□ -0.28
TTF1-201ENST00000334270 FHAD1B1AJZ9 1412 aa13.33□□□□□ -0.28
TTF1-201ENST00000334270 CLIP1P30622 1438 aa13.31□□□□□ -0.28
TTF1-201ENST00000334270 ARHGAP35Q9NRY4 1499 aa13.3□□□□□ -0.28
TTF1-201ENST00000334270 FBXO3Q9UK99 471 aa13.3□□□□□ -0.28
TTF1-201ENST00000334270 RAD54L2Q9Y4B4 1467 aa13.3□□□□□ -0.28
TTF1-201ENST00000334270 FYCO1Q9BQS8 1478 aa13.29□□□□□ -0.28
TTF1-201ENST00000334270 CARMIL1Q5VZK9 1371 aa13.29□□□□□ -0.28
TTF1-201ENST00000334270 SHROOM2Q13796 1616 aa13.27□□□□□ -0.28
TTF1-201ENST00000334270 IQGAP2Q13576 1575 aa13.27□□□□□ -0.28
TTF1-201ENST00000334270 TIAM1Q13009 1591 aa13.26□□□□□ -0.29
TTF1-201ENST00000334270 PAXIP1Q6ZW49 1069 aaPredicted RBP13.26□□□□□ -0.29
TTF1-201ENST00000334270 LRRIQ1Q96JM4 1722 aa13.25□□□□□ -0.29
TTF1-201ENST00000334270 TPRNQ4KMQ1 711 aa13.25□□□□□ -0.29
TTF1-201ENST00000334270 KLHL34Q8N239 644 aa13.25□□□□□ -0.29
TTF1-201ENST00000334270 TAOK2Q9UL54 1235 aa13.24□□□□□ -0.29
TTF1-201ENST00000334270 LOC105371045A0A1W2PR82 267 aa13.23□□□□□ -0.29
TTF1-201ENST00000334270 RGL2O15211 777 aa13.22□□□□□ -0.29
TTF1-201ENST00000334270 SNAPC4Q5SXM2 1469 aa13.21□□□□□ -0.29
TTF1-201ENST00000334270 PCF11O94913 1555 aaKnown RBP13.21□□□□□ -0.3
TTF1-201ENST00000334270 ADCY10Q96PN6 1610 aa13.21□□□□□ -0.3
TTF1-201ENST00000334270 PROM2Q8N271 834 aa13.2□□□□□ -0.3
TTF1-201ENST00000334270 NUP160Q12769 1436 aa13.2□□□□□ -0.3
TTF1-201ENST00000334270 KIAA0556O60303 1618 aa13.2□□□□□ -0.3
TTF1-201ENST00000334270 SYNJ2O15056 1496 aa13.19□□□□□ -0.3
TTF1-201ENST00000334270 HECW1Q76N89 1606 aa13.19□□□□□ -0.3
TTF1-201ENST00000334270 CASKIN1Q8WXD9 1431 aa13.19□□□□□ -0.3
TTF1-201ENST00000334270 ARHGEF11O15085 1522 aa13.18□□□□□ -0.3
TTF1-201ENST00000334270 KIAA0586Q9BVV6 1533 aa13.17□□□□□ -0.3
TTF1-201ENST00000334270 GRIN2AQ12879 1464 aa13.17□□□□□ -0.3
TTF1-201ENST00000334270 TSHZ2Q9NRE2 1034 aa13.16□□□□□ -0.3
TTF1-201ENST00000334270 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.16□□□□□ -0.3
TTF1-201ENST00000334270 CCDC18Q5T9S5 1454 aa13.16□□□□□ -0.3
TTF1-201ENST00000334270 HRCP23327 699 aa13.16□□□□□ -0.3
TTF1-201ENST00000334270 TRIM26Q12899 539 aaPredicted RBP13.15□□□□□ -0.3
TTF1-201ENST00000334270 CEP170Q5SW79 1584 aa13.15□□□□□ -0.3
TTF1-201ENST00000334270 ECM2O94769 699 aaPredicted RBP13.14□□□□□ -0.31
TTF1-201ENST00000334270 FMN1Q68DA7 1419 aa13.14□□□□□ -0.31
TTF1-201ENST00000334270 RRBP1Q9P2E9 1410 aaKnown RBP13.14□□□□□ -0.31
TTF1-201ENST00000334270 ERCC6Q03468 1493 aa13.13□□□□□ -0.31
TTF1-201ENST00000334270 EHBP1L1Q8N3D4 1523 aa13.11□□□□□ -0.31
TTF1-201ENST00000334270 CHD1O14646 1710 aa13.11□□□□□ -0.31
TTF1-201ENST00000334270 OSCARQ8IYS5 282 aa13.11□□□□□ -0.31
TTF1-201ENST00000334270 CLASP1Q7Z460 1538 aa13.09□□□□□ -0.31
TTF1-201ENST00000334270 SUPT6HQ7KZ85 1726 aaKnown RBP13.08□□□□□ -0.32
TTF1-201ENST00000334270 BCANQ96GW7 911 aa13.08□□□□□ -0.32
TTF1-201ENST00000334270 ZNF608Q9ULD9 1512 aaPredicted RBP13.08□□□□□ -0.32
TTF1-201ENST00000334270 RAPGEF6Q8TEU7 1601 aa13.07□□□□□ -0.32
TTF1-201ENST00000334270 DISP1Q96F81 1524 aa13.07□□□□□ -0.32
TTF1-201ENST00000334270 LRRC9Q6ZRR7 1453 aa13.05□□□□□ -0.32
TTF1-201ENST00000334270 ABCA8O94911 1581 aa13.04□□□□□ -0.32
TTF1-201ENST00000334270 PLCD3Q8N3E9 789 aa13.03□□□□□ -0.32
TTF1-201ENST00000334270 ITSN2Q9NZM3 1697 aa13.02□□□□□ -0.32
TTF1-201ENST00000334270 CHGAP10645 457 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms