RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 TIAM1Q13009 1591 aa27.92■■■□□ 2.06
RFTN1-201ENST00000334133 FAM50AQ14320 339 aaKnown RBP27.91■■■□□ 2.06
RFTN1-201ENST00000334133 YTHDC1Q96MU7 727 aaKnown RBP27.9■■■□□ 2.06
RFTN1-201ENST00000334133 ACIN1Q9UKV3 1341 aaKnown RBP27.89■■■□□ 2.05
RFTN1-201ENST00000334133 PHLDB1Q86UU1 1377 aa27.87■■■□□ 2.05
RFTN1-201ENST00000334133 MIER1Q8N108 512 aa27.86■■■□□ 2.05
RFTN1-201ENST00000334133 LAMC3Q9Y6N6 1575 aa27.86■■■□□ 2.05
RFTN1-201ENST00000334133 LRRC9Q6ZRR7 1453 aa27.85■■■□□ 2.05
RFTN1-201ENST00000334133 PCF11O94913 1555 aaKnown RBP27.85■■■□□ 2.05
RFTN1-201ENST00000334133 FHAD1B1AJZ9 1412 aa27.83■■■□□ 2.05
RFTN1-201ENST00000334133 PDS5BQ9NTI5 1447 aa27.79■■■□□ 2.04
RFTN1-201ENST00000334133 RAB3GAP2Q9H2M9 1393 aa27.77■■■□□ 2.04
RFTN1-201ENST00000334133 CENPBP07199 599 aaPredicted RBP27.74■■■□□ 2.03
RFTN1-201ENST00000334133 GAPVD1Q14C86 1478 aa27.74■■■□□ 2.03
RFTN1-201ENST00000334133 KIF21AQ7Z4S6 1674 aa27.74■■■□□ 2.03
RFTN1-201ENST00000334133 CLSPNQ9HAW4 1339 aa27.73■■■□□ 2.03
RFTN1-201ENST00000334133 CUL7Q14999 1698 aa27.73■■■□□ 2.03
RFTN1-201ENST00000334133 MAP3K1Q13233 1512 aa27.72■■■□□ 2.03
RFTN1-201ENST00000334133 WDR97A6NE52 1622 aa27.68■■■□□ 2.02
RFTN1-201ENST00000334133 CTTNBP2Q8WZ74 1663 aa27.67■■■□□ 2.02
RFTN1-201ENST00000334133 GTF3C3Q9Y5Q9 886 aa27.66■■■□□ 2.02
RFTN1-201ENST00000334133 CFAP43Q8NDM7 1665 aa27.64■■■□□ 2.01
RFTN1-201ENST00000334133 ABCA5Q8WWZ7 1642 aa27.64■■■□□ 2.01
RFTN1-201ENST00000334133 CASKIN1Q8WXD9 1431 aa27.64■■■□□ 2.01
RFTN1-201ENST00000334133 EFCAB5A4FU69 1503 aa27.63■■■□□ 2.01
RFTN1-201ENST00000334133 FYCO1Q9BQS8 1478 aa27.63■■■□□ 2.01
RFTN1-201ENST00000334133 SETD5Q9C0A6 1442 aa27.61■■■□□ 2.01
RFTN1-201ENST00000334133 SIN3AQ96ST3 1273 aa27.59■■■□□ 2.01
RFTN1-201ENST00000334133 AQRO60306 1485 aaKnown RBP eCLIP27.58■■■□□ 2.01
RFTN1-201ENST00000334133 FMN1Q68DA7 1419 aa27.57■■■□□ 2
RFTN1-201ENST00000334133 ARID3CA6NKF2 412 aa27.57■■■□□ 2
RFTN1-201ENST00000334133 MTUS2Q5JR59 1369 aa27.56■■■□□ 2
RFTN1-201ENST00000334133 MAPKBP1O60336 1514 aa27.53■■■□□ 2
RFTN1-201ENST00000334133 SNAPC4Q5SXM2 1469 aa27.52■■■□□ 2
RFTN1-201ENST00000334133 TARBP1Q13395 1621 aaKnown RBP27.5■■□□□ 1.99
RFTN1-201ENST00000334133 SAMD9Q5K651 1589 aa27.43■■□□□ 1.98
RFTN1-201ENST00000334133 FGD6Q6ZV73 1430 aa27.43■■□□□ 1.98
RFTN1-201ENST00000334133 LRRIQ1Q96JM4 1722 aa27.42■■□□□ 1.98
RFTN1-201ENST00000334133 ZNF608Q9ULD9 1512 aaPredicted RBP27.37■■□□□ 1.97
RFTN1-201ENST00000334133 GRIN2BQ13224 1484 aa27.37■■□□□ 1.97
RFTN1-201ENST00000334133 MRC2Q9UBG0 1479 aa27.36■■□□□ 1.97
RFTN1-201ENST00000334133 PTPRKQ15262 1439 aa27.36■■□□□ 1.97
RFTN1-201ENST00000334133 NCOA2Q15596 1464 aa27.35■■□□□ 1.97
RFTN1-201ENST00000334133 PBRM1Q86U86 1689 aa27.34■■□□□ 1.97
RFTN1-201ENST00000334133 HIRIP3Q9BW71 556 aaPredicted RBP27.33■■□□□ 1.97
RFTN1-201ENST00000334133 CHIC2Q9UKJ5 165 aa27.32■■□□□ 1.96
RFTN1-201ENST00000334133 MAGI3Q5TCQ9 1506 aa27.28■■□□□ 1.96
RFTN1-201ENST00000334133 MYOM3Q5VTT5 1437 aa27.26■■□□□ 1.95
RFTN1-201ENST00000334133 RRP7BPQ9NSQ0 103 aa27.26■■□□□ 1.95
RFTN1-201ENST00000334133 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.25■■□□□ 1.95
RFTN1-201ENST00000334133 IQGAP2Q13576 1575 aa27.25■■□□□ 1.95
RFTN1-201ENST00000334133 ADAMTS12P58397 1594 aa27.25■■□□□ 1.95
RFTN1-201ENST00000334133 CCDC18Q5T9S5 1454 aa27.22■■□□□ 1.95
RFTN1-201ENST00000334133 CDK13Q14004 1512 aaKnown RBP27.22■■□□□ 1.95
RFTN1-201ENST00000334133 SUPT6HQ7KZ85 1726 aaKnown RBP27.19■■□□□ 1.94
RFTN1-201ENST00000334133 FBLN2P98095 1184 aa27.19■■□□□ 1.94
RFTN1-201ENST00000334133 DDX10Q13206 875 aaKnown RBP27.18■■□□□ 1.94
RFTN1-201ENST00000334133 KCNH8Q96L42 1107 aa27.18■■□□□ 1.94
RFTN1-201ENST00000334133 EHBP1L1Q8N3D4 1523 aa27.17■■□□□ 1.94
RFTN1-201ENST00000334133 EPRSP07814 1512 aaKnown RBP27.15■■□□□ 1.94
RFTN1-201ENST00000334133 HFM1A2PYH4 1435 aa27.14■■□□□ 1.94
RFTN1-201ENST00000334133 IFT140Q96RY7 1462 aa27.14■■□□□ 1.94
RFTN1-201ENST00000334133 NAIPQ13075 1403 aa27.14■■□□□ 1.93
RFTN1-201ENST00000334133 ERCC6Q03468 1493 aa27.14■■□□□ 1.93
RFTN1-201ENST00000334133 PPP1R15AO75807 674 aaPredicted RBP27.13■■□□□ 1.93
RFTN1-201ENST00000334133 UGGT2Q9NYU1 1516 aa27.12■■□□□ 1.93
RFTN1-201ENST00000334133 THOC2Q8NI27 1593 aaKnown RBP27.12■■□□□ 1.93
RFTN1-201ENST00000334133 PTPN23Q9H3S7 1636 aa27.12■■□□□ 1.93
RFTN1-201ENST00000334133 HECW1Q76N89 1606 aa27.1■■□□□ 1.93
RFTN1-201ENST00000334133 TRIM52Q96A61 297 aa27.09■■□□□ 1.93
RFTN1-201ENST00000334133 TONSLQ96HA7 1378 aa27.08■■□□□ 1.93
RFTN1-201ENST00000334133 WDR62O43379 1518 aa27.07■■□□□ 1.92
RFTN1-201ENST00000334133 UACAQ9BZF9 1416 aa27.06■■□□□ 1.92
RFTN1-201ENST00000334133 CHMP7Q8WUX9 453 aaPredicted RBP27.05■■□□□ 1.92
RFTN1-201ENST00000334133 ARHGEF11O15085 1522 aa27.03■■□□□ 1.92
RFTN1-201ENST00000334133 EIF4G3O43432 1585 aaKnown RBP27.02■■□□□ 1.92
RFTN1-201ENST00000334133 ZNF644Q9H582 1327 aaPredicted RBP27.02■■□□□ 1.92
RFTN1-201ENST00000334133 TIMELESSQ9UNS1 1208 aa27■■□□□ 1.91
RFTN1-201ENST00000334133 DISP1Q96F81 1524 aa27■■□□□ 1.91
RFTN1-201ENST00000334133 FOXD1Q16676 465 aa27■■□□□ 1.91
RFTN1-201ENST00000334133 GRIN2AQ12879 1464 aa27■■□□□ 1.91
RFTN1-201ENST00000334133 KIAA0586Q9BVV6 1533 aa27■■□□□ 1.91
RFTN1-201ENST00000334133 KDM6BO15054 1643 aa26.94■■□□□ 1.9
RFTN1-201ENST00000334133 KIAA0556O60303 1618 aa26.94■■□□□ 1.9
RFTN1-201ENST00000334133 NUP153P49790 1475 aaKnown RBP26.92■■□□□ 1.9
RFTN1-201ENST00000334133 TCOF1Q13428 1488 aaKnown RBP26.91■■□□□ 1.9
RFTN1-201ENST00000334133 ZNF777Q9ULD5 760 aaPredicted RBP26.88■■□□□ 1.89
RFTN1-201ENST00000334133 PLB1Q6P1J6 1458 aa26.86■■□□□ 1.89
RFTN1-201ENST00000334133 PRG4Q92954 1404 aaPredicted RBP26.86■■□□□ 1.89
RFTN1-201ENST00000334133 MPHOSPH9Q99550 1183 aa26.86■■□□□ 1.89
RFTN1-201ENST00000334133 MIA2Q96PC5 1412 aa26.85■■□□□ 1.89
RFTN1-201ENST00000334133 DENND4BO75064 1496 aaPredicted RBP26.84■■□□□ 1.89
RFTN1-201ENST00000334133 CEP170Q5SW79 1584 aa26.83■■□□□ 1.89
RFTN1-201ENST00000334133 JPH4Q96JJ6 628 aa26.83■■□□□ 1.89
RFTN1-201ENST00000334133 CDK11AQ9UQ88 783 aaPredicted RBP26.83■■□□□ 1.89
RFTN1-201ENST00000334133 RAPGEF6Q8TEU7 1601 aa26.82■■□□□ 1.88
RFTN1-201ENST00000334133 PELP1Q8IZL8 1130 aaKnown RBP26.81■■□□□ 1.88
RFTN1-201ENST00000334133 SYNJ2O15056 1496 aa26.79■■□□□ 1.88
RFTN1-201ENST00000334133 DAPK1P53355 1430 aa26.78■■□□□ 1.88
RFTN1-201ENST00000334133 MAGI1Q96QZ7 1491 aaPredicted RBP26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms