RNA–Protein interactions for RNA: ENST00000333425.10

PIF1-202, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 1 (best) BASIC

Gene PIF1, Length 2,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-202ENST00000333425 DIEXFQ68CQ4 756 aaKnown RBP30.08■■■□□ 2.41
PIF1-202ENST00000333425 ABCA5Q8WWZ7 1642 aa30.06■■■□□ 2.4
PIF1-202ENST00000333425 FHOD3Q2V2M9 1422 aa30.06■■■□□ 2.4
PIF1-202ENST00000333425 GAPVD1Q14C86 1478 aa30.06■■■□□ 2.4
PIF1-202ENST00000333425 CTTNBP2Q8WZ74 1663 aa30.05■■■□□ 2.4
PIF1-202ENST00000333425 ATP1B4Q9UN42 357 aaPredicted RBP30.04■■■□□ 2.4
PIF1-202ENST00000333425 ZNF316A6NFI3 1004 aaPredicted RBP30.03■■■□□ 2.4
PIF1-202ENST00000333425 LRRC9Q6ZRR7 1453 aa30.03■■■□□ 2.4
PIF1-202ENST00000333425 PCF11O94913 1555 aaKnown RBP30.02■■■□□ 2.4
PIF1-202ENST00000333425 EFCAB5A4FU69 1503 aa30.01■■■□□ 2.39
PIF1-202ENST00000333425 ITGAEP38570 1179 aa29.99■■■□□ 2.39
PIF1-202ENST00000333425 DHX57Q6P158 1386 aaKnown RBP29.98■■■□□ 2.39
PIF1-202ENST00000333425 CFAP43Q8NDM7 1665 aa29.93■■■□□ 2.38
PIF1-202ENST00000333425 TARBP1Q13395 1621 aaKnown RBP29.93■■■□□ 2.38
PIF1-202ENST00000333425 CLSPNQ9HAW4 1339 aa29.91■■■□□ 2.38
PIF1-202ENST00000333425 FYCO1Q9BQS8 1478 aa29.9■■■□□ 2.38
PIF1-202ENST00000333425 PHLDB1Q86UU1 1377 aa29.9■■■□□ 2.38
PIF1-202ENST00000333425 CASKIN1Q8WXD9 1431 aa29.9■■■□□ 2.38
PIF1-202ENST00000333425 AQRO60306 1485 aaKnown RBP eCLIP29.87■■■□□ 2.371e-6■■■■□ 20.4
PIF1-202ENST00000333425 FMN1Q68DA7 1419 aa29.84■■■□□ 2.37
PIF1-202ENST00000333425 MRC2Q9UBG0 1479 aa29.81■■■□□ 2.36
PIF1-202ENST00000333425 FAM50AQ14320 339 aaKnown RBP29.79■■■□□ 2.36
PIF1-202ENST00000333425 SAMD9Q5K651 1589 aa29.78■■■□□ 2.36
PIF1-202ENST00000333425 SNAPC4Q5SXM2 1469 aa29.75■■■□□ 2.35
PIF1-202ENST00000333425 PBRM1Q86U86 1689 aa29.75■■■□□ 2.35
PIF1-202ENST00000333425 RAB3GAP2Q9H2M9 1393 aa29.74■■■□□ 2.35
PIF1-202ENST00000333425 SETD5Q9C0A6 1442 aa29.68■■■□□ 2.34
PIF1-202ENST00000333425 MTUS2Q5JR59 1369 aa29.63■■■□□ 2.33
PIF1-202ENST00000333425 ADAMTS12P58397 1594 aa29.62■■■□□ 2.33
PIF1-202ENST00000333425 GRIN2BQ13224 1484 aa29.61■■■□□ 2.33
PIF1-202ENST00000333425 LRRIQ1Q96JM4 1722 aa29.61■■■□□ 2.33
PIF1-202ENST00000333425 IFT140Q96RY7 1462 aa29.58■■■□□ 2.33
PIF1-202ENST00000333425 ZNF608Q9ULD9 1512 aaPredicted RBP29.58■■■□□ 2.33
PIF1-202ENST00000333425 WDR62O43379 1518 aa29.57■■■□□ 2.32
PIF1-202ENST00000333425 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.56■■■□□ 2.32
PIF1-202ENST00000333425 SCAF1Q9H7N4 1312 aaKnown RBP29.55■■■□□ 2.32
PIF1-202ENST00000333425 IQGAP2Q13576 1575 aa29.54■■■□□ 2.32
PIF1-202ENST00000333425 FGD6Q6ZV73 1430 aa29.54■■■□□ 2.32
PIF1-202ENST00000333425 ERCC6Q03468 1493 aa29.53■■■□□ 2.32
PIF1-202ENST00000333425 THOC2Q8NI27 1593 aaKnown RBP29.52■■■□□ 2.32
PIF1-202ENST00000333425 MAPKBP1O60336 1514 aa29.52■■■□□ 2.32
PIF1-202ENST00000333425 MIER1Q8N108 512 aa29.5■■■□□ 2.31
PIF1-202ENST00000333425 ACIN1Q9UKV3 1341 aaKnown RBP29.5■■■□□ 2.31
PIF1-202ENST00000333425 NEUROD1Q13562 356 aa29.48■■■□□ 2.31
PIF1-202ENST00000333425 NCOA2Q15596 1464 aa29.46■■■□□ 2.31
PIF1-202ENST00000333425 CENPBP07199 599 aaPredicted RBP29.43■■■□□ 2.3
PIF1-202ENST00000333425 SUPT6HQ7KZ85 1726 aaKnown RBP29.43■■■□□ 2.3
PIF1-202ENST00000333425 EHBP1L1Q8N3D4 1523 aa29.43■■■□□ 2.3
PIF1-202ENST00000333425 CCDC18Q5T9S5 1454 aa29.41■■■□□ 2.3
PIF1-202ENST00000333425 MYOM3Q5VTT5 1437 aa29.4■■■□□ 2.3
PIF1-202ENST00000333425 MAGI3Q5TCQ9 1506 aa29.38■■■□□ 2.29
PIF1-202ENST00000333425 HECW1Q76N89 1606 aa29.38■■■□□ 2.29
PIF1-202ENST00000333425 UGGT2Q9NYU1 1516 aa29.37■■■□□ 2.29
PIF1-202ENST00000333425 EIF4G3O43432 1585 aaKnown RBP29.36■■■□□ 2.29
PIF1-202ENST00000333425 SIN3AQ96ST3 1273 aa29.35■■■□□ 2.29
PIF1-202ENST00000333425 PTPRKQ15262 1439 aa29.35■■■□□ 2.29
PIF1-202ENST00000333425 EPRSP07814 1512 aaKnown RBP29.33■■■□□ 2.29
PIF1-202ENST00000333425 KIAA0586Q9BVV6 1533 aa29.32■■■□□ 2.28
PIF1-202ENST00000333425 ARID3CA6NKF2 412 aa29.31■■■□□ 2.28
PIF1-202ENST00000333425 ARHGEF11O15085 1522 aa29.3■■■□□ 2.28
PIF1-202ENST00000333425 GRIN2AQ12879 1464 aa29.29■■■□□ 2.28
PIF1-202ENST00000333425 YTHDC1Q96MU7 727 aaKnown RBP29.29■■■□□ 2.28
PIF1-202ENST00000333425 CDK13Q14004 1512 aaKnown RBP29.28■■■□□ 2.28
PIF1-202ENST00000333425 PTPN23Q9H3S7 1636 aa29.27■■■□□ 2.28
PIF1-202ENST00000333425 HFM1A2PYH4 1435 aa29.25■■■□□ 2.27
PIF1-202ENST00000333425 DISP1Q96F81 1524 aa29.24■■■□□ 2.27
PIF1-202ENST00000333425 KIAA0556O60303 1618 aa29.23■■■□□ 2.27
PIF1-202ENST00000333425 CHMP7Q8WUX9 453 aaPredicted RBP29.21■■■□□ 2.27
PIF1-202ENST00000333425 NAIPQ13075 1403 aa29.19■■■□□ 2.26
PIF1-202ENST00000333425 MAGI1Q96QZ7 1491 aaPredicted RBP29.19■■■□□ 2.26
PIF1-202ENST00000333425 TIMELESSQ9UNS1 1208 aa29.17■■■□□ 2.26
PIF1-202ENST00000333425 FBLN2P98095 1184 aa29.16■■■□□ 2.26
PIF1-202ENST00000333425 TCOF1Q13428 1488 aaKnown RBP29.16■■■□□ 2.26
PIF1-202ENST00000333425 UACAQ9BZF9 1416 aa29.14■■■□□ 2.26
PIF1-202ENST00000333425 SYNJ2O15056 1496 aa29.13■■■□□ 2.25
PIF1-202ENST00000333425 CHIC2Q9UKJ5 165 aa29.13■■■□□ 2.25
PIF1-202ENST00000333425 GTF3C3Q9Y5Q9 886 aa29.12■■■□□ 2.25
PIF1-202ENST00000333425 RRP7BPQ9NSQ0 103 aa29.11■■■□□ 2.25
PIF1-202ENST00000333425 CEP170Q5SW79 1584 aa29.1■■■□□ 2.25
PIF1-202ENST00000333425 MIA2Q96PC5 1412 aa29.09■■■□□ 2.25
PIF1-202ENST00000333425 NUP153P49790 1475 aaKnown RBP29.09■■■□□ 2.25
PIF1-202ENST00000333425 RAPGEF6Q8TEU7 1601 aa29.08■■■□□ 2.25
PIF1-202ENST00000333425 PPP1R15AO75807 674 aaPredicted RBP29.06■■■□□ 2.24
PIF1-202ENST00000333425 CDK11AQ9UQ88 783 aaPredicted RBP29.01■■■□□ 2.23
PIF1-202ENST00000333425 JPH4Q96JJ6 628 aa29■■■□□ 2.23
PIF1-202ENST00000333425 TONSLQ96HA7 1378 aa28.98■■■□□ 2.23
PIF1-202ENST00000333425 GCC2Q8IWJ2 1684 aa28.97■■■□□ 2.23
PIF1-202ENST00000333425 NUP160Q12769 1436 aa28.97■■■□□ 2.23
PIF1-202ENST00000333425 PLB1Q6P1J6 1458 aa28.95■■■□□ 2.23
PIF1-202ENST00000333425 CARMIL2Q6F5E8 1435 aa28.94■■■□□ 2.22
PIF1-202ENST00000333425 AKNAQ7Z591 1439 aa28.94■■■□□ 2.22
PIF1-202ENST00000333425 TRIM52Q96A61 297 aa28.94■■■□□ 2.22
PIF1-202ENST00000333425 KDM6BO15054 1643 aa28.92■■■□□ 2.22
PIF1-202ENST00000333425 PRG4Q92954 1404 aaPredicted RBP28.91■■■□□ 2.22
PIF1-202ENST00000333425 ZNF644Q9H582 1327 aaPredicted RBP28.91■■■□□ 2.22
PIF1-202ENST00000333425 DAPK1P53355 1430 aa28.88■■■□□ 2.21
PIF1-202ENST00000333425 TROQ12816 1431 aaPredicted RBP28.87■■■□□ 2.21
PIF1-202ENST00000333425 HIRIP3Q9BW71 556 aaPredicted RBP28.87■■■□□ 2.21
PIF1-202ENST00000333425 DDX10Q13206 875 aaKnown RBP28.85■■■□□ 2.21
PIF1-202ENST00000333425 ABCC5O15440 1437 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms