RNA–Protein interactions for RNA: ENST00000332296.7

PRAMEF1-201, Transcript of PRAME family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF1, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-201ENST00000332296 KIF21BO75037 1637 aa15.34■□□□□ 0.05
PRAMEF1-201ENST00000332296 ZNF608Q9ULD9 1512 aaPredicted RBP15.34■□□□□ 0.05
PRAMEF1-201ENST00000332296 ABCA5Q8WWZ7 1642 aa15.32■□□□□ 0.04
PRAMEF1-201ENST00000332296 SCAF1Q9H7N4 1312 aaKnown RBP15.31■□□□□ 0.04
PRAMEF1-201ENST00000332296 AQRO60306 1485 aaKnown RBP eCLIP15.31■□□□□ 0.04
PRAMEF1-201ENST00000332296 GAPVD1Q14C86 1478 aa15.3■□□□□ 0.04
PRAMEF1-201ENST00000332296 IGF1RP08069 1367 aa15.29■□□□□ 0.04
PRAMEF1-201ENST00000332296 EIF4G3O43432 1585 aaKnown RBP15.28■□□□□ 0.04
PRAMEF1-201ENST00000332296 PBRM1Q86U86 1689 aa15.27■□□□□ 0.03
PRAMEF1-201ENST00000332296 CLIP1P30622 1438 aa15.23■□□□□ 0.03
PRAMEF1-201ENST00000332296 ERICH3Q5RHP9 1530 aa15.23■□□□□ 0.03
PRAMEF1-201ENST00000332296 RAPGEF2Q9Y4G8 1499 aa15.23■□□□□ 0.03
PRAMEF1-201ENST00000332296 GRIN2BQ13224 1484 aa15.21■□□□□ 0.03
PRAMEF1-201ENST00000332296 PRXQ9BXM0 1461 aa15.21■□□□□ 0.03
PRAMEF1-201ENST00000332296 CARMIL1Q5VZK9 1371 aa15.2■□□□□ 0.02
PRAMEF1-201ENST00000332296 PRKCSHP14314 528 aaPredicted RBP15.19■□□□□ 0.02
PRAMEF1-201ENST00000332296 CUL7Q14999 1698 aa15.19■□□□□ 0.02
PRAMEF1-201ENST00000332296 VPS8Q8N3P4 1428 aa15.18■□□□□ 0.02
PRAMEF1-201ENST00000332296 DIEXFQ68CQ4 756 aaKnown RBP15.17■□□□□ 0.02
PRAMEF1-201ENST00000332296 SNAPC4Q5SXM2 1469 aa15.16■□□□□ 0.02
PRAMEF1-201ENST00000332296 ADAMTS12P58397 1594 aa15.14■□□□□ 0.01
PRAMEF1-201ENST00000332296 FOXD1Q16676 465 aa15.13■□□□□ 0.01
PRAMEF1-201ENST00000332296 FHAD1B1AJZ9 1412 aa15.12■□□□□ 0.01
PRAMEF1-201ENST00000332296 NEUROD1Q13562 356 aa15.11■□□□□ 0.01
PRAMEF1-201ENST00000332296 HNRNPUL2Q1KMD3 747 aaKnown RBP15.11■□□□□ 0.01
PRAMEF1-201ENST00000332296 MAGI1Q96QZ7 1491 aaPredicted RBP15.11■□□□□ 0.01
PRAMEF1-201ENST00000332296 ACIN1Q9UKV3 1341 aaKnown RBP15.11■□□□□ 0.01
PRAMEF1-201ENST00000332296 RANGAP1P46060 587 aaPredicted RBP15.09■□□□□ 0.01
PRAMEF1-201ENST00000332296 FBLN2P98095 1184 aa15.08■□□□□ 0.01
PRAMEF1-201ENST00000332296 SYNJ2O15056 1496 aa15.06■□□□□ 0
PRAMEF1-201ENST00000332296 CHMP7Q8WUX9 453 aaPredicted RBP15.06■□□□□ 0
PRAMEF1-201ENST00000332296 ZNF316A6NFI3 1004 aaPredicted RBP15.04■□□□□ -0
PRAMEF1-201ENST00000332296 GRIN2AQ12879 1464 aa15.03■□□□□ -0
PRAMEF1-201ENST00000332296 ARAP1Q96P48 1450 aa15.03■□□□□ -0
PRAMEF1-201ENST00000332296 CHD1O14646 1710 aa15.02■□□□□ -0
PRAMEF1-201ENST00000332296 CTTNBP2Q8WZ74 1663 aa15.02□□□□□ -0.01
PRAMEF1-201ENST00000332296 APLP2Q06481 763 aa15.01□□□□□ -0.01
PRAMEF1-201ENST00000332296 FOXD4L1Q9NU39 408 aa15□□□□□ -0.01
PRAMEF1-201ENST00000332296 FKBP8Q14318 412 aa15□□□□□ -0.01
PRAMEF1-201ENST00000332296 CENPBP07199 599 aaPredicted RBP14.96□□□□□ -0.01
PRAMEF1-201ENST00000332296 CEP170Q5SW79 1584 aa14.96□□□□□ -0.01
PRAMEF1-201ENST00000332296 GTF3C3Q9Y5Q9 886 aa14.94□□□□□ -0.02
PRAMEF1-201ENST00000332296 PELP1Q8IZL8 1130 aaKnown RBP14.94□□□□□ -0.02
PRAMEF1-201ENST00000332296 NUP160Q12769 1436 aa14.92□□□□□ -0.02
PRAMEF1-201ENST00000332296 IQGAP2Q13576 1575 aa14.92□□□□□ -0.02
PRAMEF1-201ENST00000332296 KANK4Q5T7N3 995 aaPredicted RBP14.91□□□□□ -0.02
PRAMEF1-201ENST00000332296 KIAA0586Q9BVV6 1533 aa14.9□□□□□ -0.02
PRAMEF1-201ENST00000332296 ARHGAP35Q9NRY4 1499 aa14.88□□□□□ -0.03
PRAMEF1-201ENST00000332296 PLCB2Q00722 1185 aa14.87□□□□□ -0.03
PRAMEF1-201ENST00000332296 DHX57Q6P158 1386 aaKnown RBP14.87□□□□□ -0.03
PRAMEF1-201ENST00000332296 MIER1Q8N108 512 aa14.87□□□□□ -0.03
PRAMEF1-201ENST00000332296 TAOK2Q9UL54 1235 aa14.87□□□□□ -0.03
PRAMEF1-201ENST00000332296 P3H3Q8IVL6 736 aa14.86□□□□□ -0.03
PRAMEF1-201ENST00000332296 YTHDC1Q96MU7 727 aaKnown RBP14.85□□□□□ -0.03
PRAMEF1-201ENST00000332296 RRBP1Q9P2E9 1410 aaKnown RBP14.84□□□□□ -0.03
PRAMEF1-201ENST00000332296 JPH4Q96JJ6 628 aa14.83□□□□□ -0.04
PRAMEF1-201ENST00000332296 EFCAB5A4FU69 1503 aa14.82□□□□□ -0.04
PRAMEF1-201ENST00000332296 UGGT2Q9NYU1 1516 aa14.82□□□□□ -0.04
PRAMEF1-201ENST00000332296 SAMD9Q5K651 1589 aa14.82□□□□□ -0.04
PRAMEF1-201ENST00000332296 FHOD3Q2V2M9 1422 aa14.8□□□□□ -0.04
PRAMEF1-201ENST00000332296 CLASP1Q7Z460 1538 aa14.8□□□□□ -0.04
PRAMEF1-201ENST00000332296 OSCARQ8IYS5 282 aa14.8□□□□□ -0.04
PRAMEF1-201ENST00000332296 BCANQ96GW7 911 aa14.8□□□□□ -0.04
PRAMEF1-201ENST00000332296 DISP1Q96F81 1524 aa14.78□□□□□ -0.04
PRAMEF1-201ENST00000332296 CLSPNQ9HAW4 1339 aa14.77□□□□□ -0.04
PRAMEF1-201ENST00000332296 KIAA0556O60303 1618 aa14.77□□□□□ -0.05
PRAMEF1-201ENST00000332296 DAXXQ9UER7 740 aaPredicted RBP14.76□□□□□ -0.05
PRAMEF1-201ENST00000332296 SHROOM2Q13796 1616 aa14.76□□□□□ -0.05
PRAMEF1-201ENST00000332296 CCNB3Q8WWL7 1395 aa14.75□□□□□ -0.05
PRAMEF1-201ENST00000332296 PRG4Q92954 1404 aaPredicted RBP14.75□□□□□ -0.05
PRAMEF1-201ENST00000332296 TIAM1Q13009 1591 aa14.74□□□□□ -0.05
PRAMEF1-201ENST00000332296 CARMIL2Q6F5E8 1435 aa14.73□□□□□ -0.05
PRAMEF1-201ENST00000332296 ERCC6L2Q5T890 1561 aa14.71□□□□□ -0.05
PRAMEF1-201ENST00000332296 FMN1Q68DA7 1419 aa14.7□□□□□ -0.06
PRAMEF1-201ENST00000332296 ITGAEP38570 1179 aa14.68□□□□□ -0.06
PRAMEF1-201ENST00000332296 ATP1B4Q9UN42 357 aaPredicted RBP14.68□□□□□ -0.06
PRAMEF1-201ENST00000332296 PCF11O94913 1555 aaKnown RBP14.68□□□□□ -0.06
PRAMEF1-201ENST00000332296 MAP3K1Q13233 1512 aa14.67□□□□□ -0.06
PRAMEF1-201ENST00000332296 HAP1P54257 671 aaPredicted RBP14.67□□□□□ -0.06
PRAMEF1-201ENST00000332296 CFAP43Q8NDM7 1665 aa14.67□□□□□ -0.06
PRAMEF1-201ENST00000332296 MAPKBP1O60336 1514 aa14.66□□□□□ -0.06
PRAMEF1-201ENST00000332296 LRRC9Q6ZRR7 1453 aa14.65□□□□□ -0.06
PRAMEF1-201ENST00000332296 CNKSR2Q8WXI2 1034 aa14.65□□□□□ -0.06
PRAMEF1-201ENST00000332296 RAB3GAP2Q9H2M9 1393 aa14.64□□□□□ -0.07
PRAMEF1-201ENST00000332296 CASKIN1Q8WXD9 1431 aa14.63□□□□□ -0.07
PRAMEF1-201ENST00000332296 PTPRGP23470 1445 aa14.63□□□□□ -0.07
PRAMEF1-201ENST00000332296 PHLDB1Q86UU1 1377 aa14.63□□□□□ -0.07
PRAMEF1-201ENST00000332296 FYCO1Q9BQS8 1478 aa14.62□□□□□ -0.07
PRAMEF1-201ENST00000332296 TPRNQ4KMQ1 711 aa14.62□□□□□ -0.07
PRAMEF1-201ENST00000332296 PLB1Q6P1J6 1458 aa14.61□□□□□ -0.07
PRAMEF1-201ENST00000332296 LRRIQ1Q96JM4 1722 aa14.61□□□□□ -0.07
PRAMEF1-201ENST00000332296 RAPGEF6Q8TEU7 1601 aa14.6□□□□□ -0.07
PRAMEF1-201ENST00000332296 ARID3CA6NKF2 412 aa14.59□□□□□ -0.07
PRAMEF1-201ENST00000332296 HECW1Q76N89 1606 aa14.58□□□□□ -0.08
PRAMEF1-201ENST00000332296 PIAS4Q8N2W9 510 aaPredicted RBP14.57□□□□□ -0.08
PRAMEF1-201ENST00000332296 TIMELESSQ9UNS1 1208 aa14.57□□□□□ -0.08
PRAMEF1-201ENST00000332296 SETD5Q9C0A6 1442 aa14.56□□□□□ -0.08
PRAMEF1-201ENST00000332296 ABCA8O94911 1581 aa14.56□□□□□ -0.08
PRAMEF1-201ENST00000332296 ARHGEF11O15085 1522 aa14.56□□□□□ -0.08
PRAMEF1-201ENST00000332296 NUP153P49790 1475 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms