RNA–Protein interactions for RNA: ENST00000332281.5

SNAI3-201, Transcript of snail family transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI3, Length 1,732 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3-201ENST00000332281 RANGAP1P46060 587 aaPredicted RBP29.62■■■□□ 2.33
SNAI3-201ENST00000332281 CHMP7Q8WUX9 453 aaPredicted RBP29.62■■■□□ 2.33
SNAI3-201ENST00000332281 CTTNBP2Q8WZ74 1663 aa29.62■■■□□ 2.33
SNAI3-201ENST00000332281 ARAP1Q96P48 1450 aa29.61■■■□□ 2.33
SNAI3-201ENST00000332281 ARHGAP35Q9NRY4 1499 aa29.59■■■□□ 2.33
SNAI3-201ENST00000332281 SYNJ2O15056 1496 aa29.58■■■□□ 2.33
SNAI3-201ENST00000332281 GRIN2AQ12879 1464 aa29.52■■■□□ 2.32
SNAI3-201ENST00000332281 PPARGC1BQ86YN6 1023 aaKnown RBP29.49■■■□□ 2.31
SNAI3-201ENST00000332281 EFCAB5A4FU69 1503 aa29.45■■■□□ 2.31
SNAI3-201ENST00000332281 APLP2Q06481 763 aa29.42■■■□□ 2.3
SNAI3-201ENST00000332281 CHD1O14646 1710 aa29.4■■■□□ 2.3
SNAI3-201ENST00000332281 CEP170Q5SW79 1584 aa29.34■■■□□ 2.29
SNAI3-201ENST00000332281 NUP160Q12769 1436 aa29.32■■■□□ 2.28
SNAI3-201ENST00000332281 KIAA0586Q9BVV6 1533 aa29.3■■■□□ 2.28
SNAI3-201ENST00000332281 SAMD9Q5K651 1589 aa29.29■■■□□ 2.28
SNAI3-201ENST00000332281 IQGAP2Q13576 1575 aa29.28■■■□□ 2.28
SNAI3-201ENST00000332281 P3H3Q8IVL6 736 aa29.23■■■□□ 2.27
SNAI3-201ENST00000332281 TTBK1Q5TCY1 1321 aaPredicted RBP29.22■■■□□ 2.27
SNAI3-201ENST00000332281 FHOD3Q2V2M9 1422 aa29.22■■■□□ 2.27
SNAI3-201ENST00000332281 MAP3K1Q13233 1512 aa29.22■■■□□ 2.27
SNAI3-201ENST00000332281 FMN1Q68DA7 1419 aa29.18■■■□□ 2.26
SNAI3-201ENST00000332281 JPH4Q96JJ6 628 aa29.17■■■□□ 2.26
SNAI3-201ENST00000332281 PCF11O94913 1555 aaKnown RBP29.16■■■□□ 2.26
SNAI3-201ENST00000332281 FYCO1Q9BQS8 1478 aa29.14■■■□□ 2.26
SNAI3-201ENST00000332281 UGGT2Q9NYU1 1516 aa29.12■■■□□ 2.25
SNAI3-201ENST00000332281 TIAM1Q13009 1591 aa29.12■■■□□ 2.25
SNAI3-201ENST00000332281 CASKIN1Q8WXD9 1431 aa29.12■■■□□ 2.25
SNAI3-201ENST00000332281 OSCARQ8IYS5 282 aa29.1■■■□□ 2.25
SNAI3-201ENST00000332281 HRCP23327 699 aa29.09■■■□□ 2.25
SNAI3-201ENST00000332281 CFAP43Q8NDM7 1665 aa29.08■■■□□ 2.25
SNAI3-201ENST00000332281 KANK4Q5T7N3 995 aaPredicted RBP29.06■■■□□ 2.24
SNAI3-201ENST00000332281 CLASP1Q7Z460 1538 aa29.03■■■□□ 2.24
SNAI3-201ENST00000332281 DISP1Q96F81 1524 aa29.03■■■□□ 2.24
SNAI3-201ENST00000332281 PRG4Q92954 1404 aaPredicted RBP28.99■■■□□ 2.23
SNAI3-201ENST00000332281 CARMIL2Q6F5E8 1435 aa28.98■■■□□ 2.23
SNAI3-201ENST00000332281 KIAA0556O60303 1618 aa28.98■■■□□ 2.23
SNAI3-201ENST00000332281 LRRC9Q6ZRR7 1453 aa28.97■■■□□ 2.23
SNAI3-201ENST00000332281 SHROOM2Q13796 1616 aa28.95■■■□□ 2.23
SNAI3-201ENST00000332281 ATP1B4Q9UN42 357 aaPredicted RBP28.9■■■□□ 2.22
SNAI3-201ENST00000332281 HECW1Q76N89 1606 aa28.86■■■□□ 2.21
SNAI3-201ENST00000332281 LRRIQ1Q96JM4 1722 aa28.86■■■□□ 2.21
SNAI3-201ENST00000332281 RRBP1Q9P2E9 1410 aaKnown RBP28.86■■■□□ 2.21
SNAI3-201ENST00000332281 ERCC6L2Q5T890 1561 aa28.84■■■□□ 2.21
SNAI3-201ENST00000332281 CCDC18Q5T9S5 1454 aa28.82■■■□□ 2.2
SNAI3-201ENST00000332281 PTPRGP23470 1445 aa28.77■■■□□ 2.2
SNAI3-201ENST00000332281 CCNB3Q8WWL7 1395 aa28.74■■■□□ 2.19
SNAI3-201ENST00000332281 ZEB1P37275 1124 aaPredicted RBP28.74■■■□□ 2.19
SNAI3-201ENST00000332281 MTUS2Q5JR59 1369 aa28.72■■■□□ 2.19
SNAI3-201ENST00000332281 EPRSP07814 1512 aaKnown RBP28.72■■■□□ 2.19
SNAI3-201ENST00000332281 EHBP1L1Q8N3D4 1523 aa28.7■■■□□ 2.19
SNAI3-201ENST00000332281 RAPGEF6Q8TEU7 1601 aa28.7■■■□□ 2.19
SNAI3-201ENST00000332281 PLB1Q6P1J6 1458 aa28.69■■■□□ 2.18
SNAI3-201ENST00000332281 PHLDB1Q86UU1 1377 aa28.68■■■□□ 2.18
SNAI3-201ENST00000332281 HNRNPUL2Q1KMD3 747 aaKnown RBP28.68■■■□□ 2.18
SNAI3-201ENST00000332281 ARID3CA6NKF2 412 aa28.66■■■□□ 2.18
SNAI3-201ENST00000332281 SUPT6HQ7KZ85 1726 aaKnown RBP28.64■■■□□ 2.18
SNAI3-201ENST00000332281 NUP153P49790 1475 aaKnown RBP28.6■■■□□ 2.17
SNAI3-201ENST00000332281 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.6■■■□□ 2.17
SNAI3-201ENST00000332281 ABCA8O94911 1581 aa28.59■■■□□ 2.17
SNAI3-201ENST00000332281 CDK13Q14004 1512 aaKnown RBP28.59■■■□□ 2.17
SNAI3-201ENST00000332281 MAGI3Q5TCQ9 1506 aa28.59■■■□□ 2.17
SNAI3-201ENST00000332281 UACAQ9BZF9 1416 aa28.57■■■□□ 2.16
SNAI3-201ENST00000332281 NCOA2Q15596 1464 aa28.57■■■□□ 2.16
SNAI3-201ENST00000332281 CCER1Q8TC90 406 aaPredicted RBP28.56■■■□□ 2.16
SNAI3-201ENST00000332281 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.55■■■□□ 2.16
SNAI3-201ENST00000332281 ARHGEF11O15085 1522 aa28.55■■■□□ 2.16
SNAI3-201ENST00000332281 FGD6Q6ZV73 1430 aa28.5■■■□□ 2.15
SNAI3-201ENST00000332281 MYOM3Q5VTT5 1437 aa28.49■■■□□ 2.15
SNAI3-201ENST00000332281 CDK11AQ9UQ88 783 aaPredicted RBP28.47■■■□□ 2.15
SNAI3-201ENST00000332281 ABCC2Q92887 1545 aa28.46■■■□□ 2.15
SNAI3-201ENST00000332281 ATP10BO94823 1461 aa28.44■■■□□ 2.14
SNAI3-201ENST00000332281 RIMBP3CA6NJZ7 1639 aa28.44■■■□□ 2.14
SNAI3-201ENST00000332281 RIMBP3BA6NNM3 1639 aa28.44■■■□□ 2.14
SNAI3-201ENST00000332281 RIMBP3Q9UFD9 1639 aa28.44■■■□□ 2.14
SNAI3-201ENST00000332281 FAM50AQ14320 339 aaKnown RBP28.42■■■□□ 2.14
SNAI3-201ENST00000332281 UHRF1BP1LA0JNW5 1464 aa28.41■■■□□ 2.14
SNAI3-201ENST00000332281 CYB5RLQ6IPT4 315 aa28.39■■■□□ 2.14
SNAI3-201ENST00000332281 TROQ12816 1431 aaPredicted RBP28.36■■■□□ 2.13
SNAI3-201ENST00000332281 ADCY10Q96PN6 1610 aa28.36■■■□□ 2.13
SNAI3-201ENST00000332281 ITGAEP38570 1179 aa28.35■■■□□ 2.13
SNAI3-201ENST00000332281 PTPN23Q9H3S7 1636 aa28.35■■■□□ 2.13
SNAI3-201ENST00000332281 MIA2Q96PC5 1412 aa28.34■■■□□ 2.13
SNAI3-201ENST00000332281 PLEKHD1A6NEE1 506 aa28.34■■■□□ 2.13
SNAI3-201ENST00000332281 TCOF1Q13428 1488 aaKnown RBP28.32■■■□□ 2.12
SNAI3-201ENST00000332281 KDM5BQ9UGL1 1544 aa28.3■■■□□ 2.12
SNAI3-201ENST00000332281 ZCCHC11Q5TAX3 1644 aaKnown RBP28.28■■■□□ 2.12
SNAI3-201ENST00000332281 NPM1P06748 294 aaKnown RBP eCLIP28.26■■■□□ 2.12
SNAI3-201ENST00000332281 SETD5Q9C0A6 1442 aa28.25■■■□□ 2.11
SNAI3-201ENST00000332281 ITSN2Q9NZM3 1697 aa28.22■■■□□ 2.11
SNAI3-201ENST00000332281 CLSPNQ9HAW4 1339 aa28.21■■■□□ 2.11
SNAI3-201ENST00000332281 RAB3GAP2Q9H2M9 1393 aa28.2■■■□□ 2.11
SNAI3-201ENST00000332281 KIF14Q15058 1648 aa28.2■■■□□ 2.1
SNAI3-201ENST00000332281 DHX57Q6P158 1386 aaKnown RBP28.19■■■□□ 2.1
SNAI3-201ENST00000332281 KCNH8Q96L42 1107 aa28.17■■■□□ 2.1
SNAI3-201ENST00000332281 PTPRKQ15262 1439 aa28.13■■■□□ 2.09
SNAI3-201ENST00000332281 GPATCH8Q9UKJ3 1502 aaKnown RBP28.12■■■□□ 2.09
SNAI3-201ENST00000332281 HFM1A2PYH4 1435 aa28.11■■■□□ 2.09
SNAI3-201ENST00000332281 ABCC10Q5T3U5 1492 aa28.1■■■□□ 2.09
SNAI3-201ENST00000332281 ASXL2Q76L83 1435 aa28.09■■■□□ 2.09
SNAI3-201ENST00000332281 DNAJC5Q9H3Z4 198 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms