RNA–Protein interactions for RNA: ENST00000331426.5

RBM43-201, Transcript of RNA binding motif protein 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RBM43, Length 4,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM43-201ENST00000331426 RTN4Q9NQC3 1192 aaKnown RBP10.97□□□□□ -0.65
RBM43-201ENST00000331426 CUX1P39880 1505 aa10.97□□□□□ -0.65
RBM43-201ENST00000331426 POLA1P09884 1462 aaPredicted RBP10.97□□□□□ -0.65
RBM43-201ENST00000331426 GAPVD1Q14C86 1478 aa10.96□□□□□ -0.65
RBM43-201ENST00000331426 URB2Q14146 1524 aaKnown RBP10.96□□□□□ -0.66
RBM43-201ENST00000331426 ANO8Q9HCE9 1232 aaPredicted RBP10.95□□□□□ -0.66
RBM43-201ENST00000331426 GOLGA3Q08378 1498 aa10.94□□□□□ -0.66
RBM43-201ENST00000331426 MAGI1Q96QZ7 1491 aaPredicted RBP10.94□□□□□ -0.66
RBM43-201ENST00000331426 KIF21AQ7Z4S6 1674 aa10.93□□□□□ -0.66
RBM43-201ENST00000331426 FHAD1B1AJZ9 1412 aa10.93□□□□□ -0.66
RBM43-201ENST00000331426 CARMIL1Q5VZK9 1371 aa10.93□□□□□ -0.66
RBM43-201ENST00000331426 ERICH3Q5RHP9 1530 aa10.93□□□□□ -0.66
RBM43-201ENST00000331426 RBM19Q9Y4C8 960 aaKnown RBP10.91□□□□□ -0.66
RBM43-201ENST00000331426 FKBP8Q14318 412 aa10.91□□□□□ -0.66
RBM43-201ENST00000331426 CUL7Q14999 1698 aa10.9□□□□□ -0.66
RBM43-201ENST00000331426 RAPGEF2Q9Y4G8 1499 aa10.9□□□□□ -0.66
RBM43-201ENST00000331426 FBLN2P98095 1184 aa10.9□□□□□ -0.67
RBM43-201ENST00000331426 SYNJ1O43426 1573 aa10.9□□□□□ -0.67
RBM43-201ENST00000331426 THOC2Q8NI27 1593 aaKnown RBP10.89□□□□□ -0.67
RBM43-201ENST00000331426 CARMIL2Q6F5E8 1435 aa10.88□□□□□ -0.67
RBM43-201ENST00000331426 MYT1LQ9UL68 1186 aa10.87□□□□□ -0.67
RBM43-201ENST00000331426 AMER1Q5JTC6 1135 aaPredicted RBP10.87□□□□□ -0.67
RBM43-201ENST00000331426 TDRD9Q8NDG6 1382 aaKnown RBP10.87□□□□□ -0.67
RBM43-201ENST00000331426 DEKP35659 375 aaKnown RBP10.86□□□□□ -0.67
RBM43-201ENST00000331426 CCDC136Q96JN2 1154 aa10.85□□□□□ -0.67
RBM43-201ENST00000331426 ITGAEP38570 1179 aa10.84□□□□□ -0.67
RBM43-201ENST00000331426 SYNJ2O15056 1496 aa10.83□□□□□ -0.68
RBM43-201ENST00000331426 RAD54L2Q9Y4B4 1467 aa10.83□□□□□ -0.68
RBM43-201ENST00000331426 OSCARQ8IYS5 282 aa10.83□□□□□ -0.68
RBM43-201ENST00000331426 TNIKQ9UKE5 1360 aa10.83□□□□□ -0.68
RBM43-201ENST00000331426 CDK11AQ9UQ88 783 aaPredicted RBP10.82□□□□□ -0.68
RBM43-201ENST00000331426 IGF1RP08069 1367 aa10.82□□□□□ -0.68
RBM43-201ENST00000331426 EIF5BO60841 1220 aaKnown RBP10.8□□□□□ -0.68
RBM43-201ENST00000331426 KIF21BO75037 1637 aa10.8□□□□□ -0.68
RBM43-201ENST00000331426 NPM1P06748 294 aaKnown RBP eCLIP10.8□□□□□ -0.68
RBM43-201ENST00000331426 HNRNPUL2Q1KMD3 747 aaKnown RBP10.8□□□□□ -0.68
RBM43-201ENST00000331426 NBR1Q14596 966 aa10.79□□□□□ -0.68
RBM43-201ENST00000331426 RTL5Q5HYW3 569 aaPredicted RBP10.78□□□□□ -0.68
RBM43-201ENST00000331426 SALL2Q9Y467 1007 aaPredicted RBP10.78□□□□□ -0.68
RBM43-201ENST00000331426 SLC4A1APQ9BWU0 796 aaKnown RBP10.77□□□□□ -0.68
RBM43-201ENST00000331426 SNAPC4Q5SXM2 1469 aa10.77□□□□□ -0.69
RBM43-201ENST00000331426 AQRO60306 1485 aaKnown RBP eCLIP10.77□□□□□ -0.69
RBM43-201ENST00000331426 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.77□□□□□ -0.69
RBM43-201ENST00000331426 TARBP1Q13395 1621 aaKnown RBP10.76□□□□□ -0.69
RBM43-201ENST00000331426 PRXQ9BXM0 1461 aa10.75□□□□□ -0.69
RBM43-201ENST00000331426 ABCA5Q8WWZ7 1642 aa10.75□□□□□ -0.69
RBM43-201ENST00000331426 KIAA0586Q9BVV6 1533 aa10.74□□□□□ -0.69
RBM43-201ENST00000331426 EIF4G3O43432 1585 aaKnown RBP10.73□□□□□ -0.69
RBM43-201ENST00000331426 EFCAB5A4FU69 1503 aa10.73□□□□□ -0.69
RBM43-201ENST00000331426 GRIN2AQ12879 1464 aa10.73□□□□□ -0.69
RBM43-201ENST00000331426 FMN1Q68DA7 1419 aa10.72□□□□□ -0.69
RBM43-201ENST00000331426 CLIP1P30622 1438 aa10.71□□□□□ -0.69
RBM43-201ENST00000331426 ADAMTS12P58397 1594 aa10.71□□□□□ -0.7
RBM43-201ENST00000331426 MSH5O43196 834 aa10.69□□□□□ -0.7
RBM43-201ENST00000331426 PBRM1Q86U86 1689 aa10.68□□□□□ -0.7
RBM43-201ENST00000331426 ERICH6BQ5W0A0 696 aa10.68□□□□□ -0.7
RBM43-201ENST00000331426 JPH4Q96JJ6 628 aa10.68□□□□□ -0.7
RBM43-201ENST00000331426 ZNF608Q9ULD9 1512 aaPredicted RBP10.67□□□□□ -0.7
RBM43-201ENST00000331426 ATP1B4Q9UN42 357 aaPredicted RBP10.66□□□□□ -0.7
RBM43-201ENST00000331426 UBE2Q2Q8WVN8 375 aa10.65□□□□□ -0.7
RBM43-201ENST00000331426 NUP160Q12769 1436 aa10.65□□□□□ -0.71
RBM43-201ENST00000331426 IQGAP2Q13576 1575 aa10.64□□□□□ -0.71
RBM43-201ENST00000331426 CEP162Q5TB80 1403 aa10.62□□□□□ -0.71
RBM43-201ENST00000331426 PTPRGP23470 1445 aa10.62□□□□□ -0.71
RBM43-201ENST00000331426 TRIM52Q96A61 297 aa10.61□□□□□ -0.71
RBM43-201ENST00000331426 FANCIQ9NVI1 1328 aa10.61□□□□□ -0.71
RBM43-201ENST00000331426 RANGAP1P46060 587 aaPredicted RBP10.6□□□□□ -0.71
RBM43-201ENST00000331426 PLEKHD1A6NEE1 506 aa10.59□□□□□ -0.71
RBM43-201ENST00000331426 UGGT2Q9NYU1 1516 aa10.59□□□□□ -0.71
RBM43-201ENST00000331426 CCDC18Q5T9S5 1454 aa10.58□□□□□ -0.72
RBM43-201ENST00000331426 IRX6P78412 446 aaPredicted RBP10.58□□□□□ -0.72
RBM43-201ENST00000331426 IL27Q8NEV9 243 aa10.57□□□□□ -0.72
RBM43-201ENST00000331426 PRG4Q92954 1404 aaPredicted RBP10.57□□□□□ -0.72
RBM43-201ENST00000331426 RUSC2Q8N2Y8 1516 aa10.57□□□□□ -0.72
RBM43-201ENST00000331426 KCNH8Q96L42 1107 aa10.57□□□□□ -0.72
RBM43-201ENST00000331426 NOP58Q9Y2X3 529 aaKnown RBP10.56□□□□□ -0.72
RBM43-201ENST00000331426 VPS8Q8N3P4 1428 aa10.56□□□□□ -0.72
RBM43-201ENST00000331426 CTTNBP2Q8WZ74 1663 aa10.55□□□□□ -0.72
RBM43-201ENST00000331426 PKNOX2Q96KN3 472 aa10.55□□□□□ -0.72
RBM43-201ENST00000331426 GLIPR1L2Q4G1C9 344 aa10.53□□□□□ -0.72
RBM43-201ENST00000331426 MTUS2Q5JR59 1369 aa10.53□□□□□ -0.72
RBM43-201ENST00000331426 ANP32AP39687 249 aaKnown RBP10.51□□□□□ -0.73
RBM43-201ENST00000331426 FYCO1Q9BQS8 1478 aa10.51□□□□□ -0.73
RBM43-201ENST00000331426 CASKIN1Q8WXD9 1431 aa10.51□□□□□ -0.73
RBM43-201ENST00000331426 ZBTB47Q9UFB7 747 aaPredicted RBP10.51□□□□□ -0.73
RBM43-201ENST00000331426 DDX10Q13206 875 aaKnown RBP10.5□□□□□ -0.73
RBM43-201ENST00000331426 P3H3Q8IVL6 736 aa10.5□□□□□ -0.73
RBM43-201ENST00000331426 HECW1Q76N89 1606 aa10.49□□□□□ -0.73
RBM43-201ENST00000331426 UACAQ9BZF9 1416 aa10.49□□□□□ -0.73
RBM43-201ENST00000331426 MAP3K1Q13233 1512 aa10.48□□□□□ -0.73
RBM43-201ENST00000331426 ADRA2BP18089 450 aa10.48□□□□□ -0.73
RBM43-201ENST00000331426 NCBP3Q53F19 620 aaKnown RBP10.46□□□□□ -0.73
RBM43-201ENST00000331426 RSPH4AQ5TD94 716 aa10.46□□□□□ -0.73
RBM43-201ENST00000331426 CHD1O14646 1710 aa10.46□□□□□ -0.73
RBM43-201ENST00000331426 ANP32CO43423 234 aa10.46□□□□□ -0.74
RBM43-201ENST00000331426 UHRF1BP1LA0JNW5 1464 aa10.45□□□□□ -0.74
RBM43-201ENST00000331426 CLASP1Q7Z460 1538 aa10.45□□□□□ -0.74
RBM43-201ENST00000331426 KIAA0556O60303 1618 aa10.44□□□□□ -0.74
RBM43-201ENST00000331426 CEP170Q5SW79 1584 aa10.44□□□□□ -0.74
RBM43-201ENST00000331426 FHOD3Q2V2M9 1422 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms