RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 ARHGAP35Q9NRY4 1499 aa22.7■■□□□ 1.22
BRCC3-201ENST00000330045 MRC2Q9UBG0 1479 aa22.69■■□□□ 1.22
BRCC3-201ENST00000330045 CLSPNQ9HAW4 1339 aa22.69■■□□□ 1.22
BRCC3-201ENST00000330045 RRBP1Q9P2E9 1410 aaKnown RBP22.68■■□□□ 1.22
BRCC3-201ENST00000330045 MIER1Q8N108 512 aa22.66■■□□□ 1.22
BRCC3-201ENST00000330045 TARBP1Q13395 1621 aaKnown RBP22.64■■□□□ 1.22
BRCC3-201ENST00000330045 DHX57Q6P158 1386 aaKnown RBP22.64■■□□□ 1.22
BRCC3-201ENST00000330045 ERCC6Q03468 1493 aa22.62■■□□□ 1.21
BRCC3-201ENST00000330045 ABCA5Q8WWZ7 1642 aa22.61■■□□□ 1.21
BRCC3-201ENST00000330045 GAPVD1Q14C86 1478 aa22.61■■□□□ 1.21
BRCC3-201ENST00000330045 YTHDC1Q96MU7 727 aaKnown RBP22.59■■□□□ 1.21
BRCC3-201ENST00000330045 AQRO60306 1485 aaKnown RBP eCLIP22.58■■□□□ 1.213e-7■■■□□ 19
BRCC3-201ENST00000330045 WDR62O43379 1518 aa22.55■■□□□ 1.2
BRCC3-201ENST00000330045 ZNF608Q9ULD9 1512 aaPredicted RBP22.53■■□□□ 1.2
BRCC3-201ENST00000330045 CCNB3Q8WWL7 1395 aa22.53■■□□□ 1.2
BRCC3-201ENST00000330045 MAP3K1Q13233 1512 aa22.53■■□□□ 1.2
BRCC3-201ENST00000330045 CUL7Q14999 1698 aa22.51■■□□□ 1.19
BRCC3-201ENST00000330045 P3H3Q8IVL6 736 aa22.5■■□□□ 1.19
BRCC3-201ENST00000330045 TIAM1Q13009 1591 aa22.49■■□□□ 1.19
BRCC3-201ENST00000330045 THOC2Q8NI27 1593 aaKnown RBP22.48■■□□□ 1.19
BRCC3-201ENST00000330045 PBRM1Q86U86 1689 aa22.42■■□□□ 1.18
BRCC3-201ENST00000330045 IFT140Q96RY7 1462 aa22.42■■□□□ 1.18
BRCC3-201ENST00000330045 ITGAEP38570 1179 aa22.4■■□□□ 1.18
BRCC3-201ENST00000330045 LRRC9Q6ZRR7 1453 aa22.38■■□□□ 1.17
BRCC3-201ENST00000330045 FHAD1B1AJZ9 1412 aa22.36■■□□□ 1.17
BRCC3-201ENST00000330045 CFAP43Q8NDM7 1665 aa22.36■■□□□ 1.17
BRCC3-201ENST00000330045 FHOD3Q2V2M9 1422 aa22.35■■□□□ 1.17
BRCC3-201ENST00000330045 CTTNBP2Q8WZ74 1663 aa22.35■■□□□ 1.17
BRCC3-201ENST00000330045 GRIN2BQ13224 1484 aa22.34■■□□□ 1.17
BRCC3-201ENST00000330045 EIF4G3O43432 1585 aaKnown RBP22.32■■□□□ 1.16
BRCC3-201ENST00000330045 RAB3GAP2Q9H2M9 1393 aa22.32■■□□□ 1.16
BRCC3-201ENST00000330045 PCF11O94913 1555 aaKnown RBP22.32■■□□□ 1.16
BRCC3-201ENST00000330045 ADAMTS12P58397 1594 aa22.32■■□□□ 1.16
BRCC3-201ENST00000330045 PHLDB1Q86UU1 1377 aa22.28■■□□□ 1.16
BRCC3-201ENST00000330045 MAPKBP1O60336 1514 aa22.28■■□□□ 1.16
BRCC3-201ENST00000330045 SNAPC4Q5SXM2 1469 aa22.28■■□□□ 1.16
BRCC3-201ENST00000330045 EFCAB5A4FU69 1503 aa22.27■■□□□ 1.16
BRCC3-201ENST00000330045 ATP1B4Q9UN42 357 aaPredicted RBP22.25■■□□□ 1.15
BRCC3-201ENST00000330045 SETD5Q9C0A6 1442 aa22.25■■□□□ 1.15
BRCC3-201ENST00000330045 FYCO1Q9BQS8 1478 aa22.23■■□□□ 1.15
BRCC3-201ENST00000330045 FAM50AQ14320 339 aaKnown RBP22.19■■□□□ 1.14
BRCC3-201ENST00000330045 CASKIN1Q8WXD9 1431 aa22.19■■□□□ 1.14
BRCC3-201ENST00000330045 FBLN2P98095 1184 aa22.16■■□□□ 1.14
BRCC3-201ENST00000330045 SAMD9Q5K651 1589 aa22.16■■□□□ 1.14
BRCC3-201ENST00000330045 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.13■■□□□ 1.13
BRCC3-201ENST00000330045 GRIN2AQ12879 1464 aa22.12■■□□□ 1.13
BRCC3-201ENST00000330045 IQGAP2Q13576 1575 aa22.12■■□□□ 1.13
BRCC3-201ENST00000330045 CHMP7Q8WUX9 453 aaPredicted RBP22.1■■□□□ 1.13
BRCC3-201ENST00000330045 FMN1Q68DA7 1419 aa22.09■■□□□ 1.13
BRCC3-201ENST00000330045 MAGI1Q96QZ7 1491 aaPredicted RBP22.07■■□□□ 1.12
BRCC3-201ENST00000330045 SIN3AQ96ST3 1273 aa22.06■■□□□ 1.12
BRCC3-201ENST00000330045 SYNJ2O15056 1496 aa22.04■■□□□ 1.12
BRCC3-201ENST00000330045 CEP170Q5SW79 1584 aa22.03■■□□□ 1.12
BRCC3-201ENST00000330045 TIMELESSQ9UNS1 1208 aa22.03■■□□□ 1.12
BRCC3-201ENST00000330045 KIAA0586Q9BVV6 1533 aa22.01■■□□□ 1.11
BRCC3-201ENST00000330045 FGD6Q6ZV73 1430 aa22.01■■□□□ 1.11
BRCC3-201ENST00000330045 LRRIQ1Q96JM4 1722 aa22.01■■□□□ 1.11
BRCC3-201ENST00000330045 ARID3CA6NKF2 412 aa22■■□□□ 1.11
BRCC3-201ENST00000330045 DISP1Q96F81 1524 aa21.97■■□□□ 1.11
BRCC3-201ENST00000330045 UGGT2Q9NYU1 1516 aa21.97■■□□□ 1.11
BRCC3-201ENST00000330045 SUPT16HQ9Y5B9 1047 aaKnown RBP21.94■■□□□ 1.1
BRCC3-201ENST00000330045 MTUS2Q5JR59 1369 aa21.94■■□□□ 1.1
BRCC3-201ENST00000330045 PPP1R15AO75807 674 aaPredicted RBP21.91■■□□□ 1.1
BRCC3-201ENST00000330045 DDX10Q13206 875 aaKnown RBP21.91■■□□□ 1.1
BRCC3-201ENST00000330045 NUP160Q12769 1436 aa21.91■■□□□ 1.1
BRCC3-201ENST00000330045 KIAA0556O60303 1618 aa21.91■■□□□ 1.1
BRCC3-201ENST00000330045 KCNH8Q96L42 1107 aa21.9■■□□□ 1.1
BRCC3-201ENST00000330045 HFM1A2PYH4 1435 aa21.89■■□□□ 1.1
BRCC3-201ENST00000330045 NCOA2Q15596 1464 aa21.88■■□□□ 1.09
BRCC3-201ENST00000330045 CCDC18Q5T9S5 1454 aa21.88■■□□□ 1.09
BRCC3-201ENST00000330045 PTPRKQ15262 1439 aa21.88■■□□□ 1.09
BRCC3-201ENST00000330045 SUPT6HQ7KZ85 1726 aaKnown RBP21.87■■□□□ 1.09
BRCC3-201ENST00000330045 PTPN23Q9H3S7 1636 aa21.87■■□□□ 1.09
BRCC3-201ENST00000330045 EHBP1L1Q8N3D4 1523 aa21.87■■□□□ 1.09
BRCC3-201ENST00000330045 MYOM3Q5VTT5 1437 aa21.87■■□□□ 1.09
BRCC3-201ENST00000330045 JPH4Q96JJ6 628 aa21.87■■□□□ 1.09
BRCC3-201ENST00000330045 MAGI3Q5TCQ9 1506 aa21.86■■□□□ 1.09
BRCC3-201ENST00000330045 CDK13Q14004 1512 aaKnown RBP21.86■■□□□ 1.09
BRCC3-201ENST00000330045 UACAQ9BZF9 1416 aa21.84■■□□□ 1.09
BRCC3-201ENST00000330045 ARHGEF11O15085 1522 aa21.83■■□□□ 1.08
BRCC3-201ENST00000330045 CHD1O14646 1710 aa21.81■■□□□ 1.08
BRCC3-201ENST00000330045 EPRSP07814 1512 aaKnown RBP21.81■■□□□ 1.08
BRCC3-201ENST00000330045 NAIPQ13075 1403 aa21.8■■□□□ 1.08
BRCC3-201ENST00000330045 TONSLQ96HA7 1378 aa21.8■■□□□ 1.08
BRCC3-201ENST00000330045 HECW1Q76N89 1606 aa21.79■■□□□ 1.08
BRCC3-201ENST00000330045 HIRIP3Q9BW71 556 aaPredicted RBP21.79■■□□□ 1.08
BRCC3-201ENST00000330045 PLB1Q6P1J6 1458 aa21.77■■□□□ 1.08
BRCC3-201ENST00000330045 MYT1Q01538 1121 aa21.77■■□□□ 1.08
BRCC3-201ENST00000330045 NUP153P49790 1475 aaKnown RBP21.75■■□□□ 1.07
BRCC3-201ENST00000330045 TCOF1Q13428 1488 aaKnown RBP21.74■■□□□ 1.07
BRCC3-201ENST00000330045 CCER2I3L3R5 266 aa21.71■■□□□ 1.07
BRCC3-201ENST00000330045 RAPGEF6Q8TEU7 1601 aa21.71■■□□□ 1.07
BRCC3-201ENST00000330045 ANP32CO43423 234 aa21.71■■□□□ 1.07
BRCC3-201ENST00000330045 CARMIL2Q6F5E8 1435 aa21.7■■□□□ 1.06
BRCC3-201ENST00000330045 GCC2Q8IWJ2 1684 aa21.69■■□□□ 1.06
BRCC3-201ENST00000330045 PRG4Q92954 1404 aaPredicted RBP21.69■■□□□ 1.06
BRCC3-201ENST00000330045 KDM5BQ9UGL1 1544 aa21.68■■□□□ 1.06
BRCC3-201ENST00000330045 AKNAQ7Z591 1439 aa21.66■■□□□ 1.06
BRCC3-201ENST00000330045 ERCC6L2Q5T890 1561 aa21.63■■□□□ 1.05
BRCC3-201ENST00000330045 RRP7BPQ9NSQ0 103 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms