RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 PRXQ9BXM0 1461 aa10.75□□□□□ -0.69
TRIM49-201ENST00000329758 CUX2O14529 1486 aa10.74□□□□□ -0.69
TRIM49-201ENST00000329758 ERICH3Q5RHP9 1530 aa10.74□□□□□ -0.69
TRIM49-201ENST00000329758 POLA1P09884 1462 aaPredicted RBP10.74□□□□□ -0.69
TRIM49-201ENST00000329758 FANCIQ9NVI1 1328 aa10.73□□□□□ -0.69
TRIM49-201ENST00000329758 WDR97A6NE52 1622 aa10.73□□□□□ -0.69
TRIM49-201ENST00000329758 RAD54L2Q9Y4B4 1467 aa10.72□□□□□ -0.69
TRIM49-201ENST00000329758 POTEDQ86YR6 584 aa10.72□□□□□ -0.69
TRIM49-201ENST00000329758 HNRNPUL2Q1KMD3 747 aaKnown RBP10.72□□□□□ -0.69
TRIM49-201ENST00000329758 PDS5BQ9NTI5 1447 aa10.69□□□□□ -0.7
TRIM49-201ENST00000329758 SLC24A1O60721 1099 aa10.69□□□□□ -0.7
TRIM49-201ENST00000329758 MSH5O43196 834 aa10.69□□□□□ -0.7
TRIM49-201ENST00000329758 DEKP35659 375 aaKnown RBP10.69□□□□□ -0.7
TRIM49-201ENST00000329758 VPS8Q8N3P4 1428 aa10.68□□□□□ -0.7
TRIM49-201ENST00000329758 ABCA10Q8WWZ4 1543 aa10.67□□□□□ -0.7
TRIM49-201ENST00000329758 IGF1RP08069 1367 aa10.65□□□□□ -0.7
TRIM49-201ENST00000329758 EIF5BO60841 1220 aaKnown RBP10.65□□□□□ -0.7
TRIM49-201ENST00000329758 KANK4Q5T7N3 995 aaPredicted RBP10.65□□□□□ -0.7
TRIM49-201ENST00000329758 ARAP1Q96P48 1450 aa10.65□□□□□ -0.71
TRIM49-201ENST00000329758 SALL2Q9Y467 1007 aaPredicted RBP10.65□□□□□ -0.71
TRIM49-201ENST00000329758 ABCA5Q8WWZ7 1642 aa10.64□□□□□ -0.71
TRIM49-201ENST00000329758 P3H3Q8IVL6 736 aa10.63□□□□□ -0.71
TRIM49-201ENST00000329758 TARBP1Q13395 1621 aaKnown RBP10.63□□□□□ -0.71
TRIM49-201ENST00000329758 CUL7Q14999 1698 aa10.6□□□□□ -0.71
TRIM49-201ENST00000329758 MRC2Q9UBG0 1479 aa10.6□□□□□ -0.71
TRIM49-201ENST00000329758 CARMIL1Q5VZK9 1371 aa10.59□□□□□ -0.71
TRIM49-201ENST00000329758 ARHGAP35Q9NRY4 1499 aa10.58□□□□□ -0.72
TRIM49-201ENST00000329758 PBRM1Q86U86 1689 aa10.58□□□□□ -0.72
TRIM49-201ENST00000329758 TDRD9Q8NDG6 1382 aaKnown RBP10.58□□□□□ -0.72
TRIM49-201ENST00000329758 CTTNBP2Q8WZ74 1663 aa10.57□□□□□ -0.72
TRIM49-201ENST00000329758 DAXXQ9UER7 740 aaPredicted RBP10.57□□□□□ -0.72
TRIM49-201ENST00000329758 WDR62O43379 1518 aa10.57□□□□□ -0.72
TRIM49-201ENST00000329758 THOC2Q8NI27 1593 aaKnown RBP10.56□□□□□ -0.72
TRIM49-201ENST00000329758 ATP1B4Q9UN42 357 aaPredicted RBP10.56□□□□□ -0.72
TRIM49-201ENST00000329758 NEFLP07196 543 aa10.55□□□□□ -0.72
TRIM49-201ENST00000329758 FKBP8Q14318 412 aa10.55□□□□□ -0.72
TRIM49-201ENST00000329758 AEBP2Q6ZN18 517 aaPredicted RBP10.55□□□□□ -0.72
TRIM49-201ENST00000329758 GAPVD1Q14C86 1478 aa10.55□□□□□ -0.72
TRIM49-201ENST00000329758 ITGAEP38570 1179 aa10.55□□□□□ -0.72
TRIM49-201ENST00000329758 BCANQ96GW7 911 aa10.55□□□□□ -0.72
TRIM49-201ENST00000329758 ERCC6Q03468 1493 aa10.52□□□□□ -0.72
TRIM49-201ENST00000329758 PKNOX2Q96KN3 472 aa10.52□□□□□ -0.72
TRIM49-201ENST00000329758 CCDC136Q96JN2 1154 aa10.52□□□□□ -0.73
TRIM49-201ENST00000329758 ZNF608Q9ULD9 1512 aaPredicted RBP10.5□□□□□ -0.73
TRIM49-201ENST00000329758 AQRO60306 1485 aaKnown RBP eCLIP10.5□□□□□ -0.73
TRIM49-201ENST00000329758 EIF4G3O43432 1585 aaKnown RBP10.49□□□□□ -0.73
TRIM49-201ENST00000329758 ADAMTS12P58397 1594 aa10.49□□□□□ -0.73
TRIM49-201ENST00000329758 FHOD3Q2V2M9 1422 aa10.48□□□□□ -0.73
TRIM49-201ENST00000329758 IFT140Q96RY7 1462 aa10.46□□□□□ -0.73
TRIM49-201ENST00000329758 PCF11O94913 1555 aaKnown RBP10.45□□□□□ -0.74
TRIM49-201ENST00000329758 CDK11AQ9UQ88 783 aaPredicted RBP10.45□□□□□ -0.74
TRIM49-201ENST00000329758 EFCAB5A4FU69 1503 aa10.43□□□□□ -0.74
TRIM49-201ENST00000329758 SAMD9Q5K651 1589 aa10.43□□□□□ -0.74
TRIM49-201ENST00000329758 GRIN2BQ13224 1484 aa10.43□□□□□ -0.74
TRIM49-201ENST00000329758 CFAP43Q8NDM7 1665 aa10.41□□□□□ -0.74
TRIM49-201ENST00000329758 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.41□□□□□ -0.74
TRIM49-201ENST00000329758 LRRIQ1Q96JM4 1722 aa10.41□□□□□ -0.74
TRIM49-201ENST00000329758 TIAM1Q13009 1591 aa10.41□□□□□ -0.74
TRIM49-201ENST00000329758 FHAD1B1AJZ9 1412 aa10.41□□□□□ -0.74
TRIM49-201ENST00000329758 NOP58Q9Y2X3 529 aaKnown RBP10.41□□□□□ -0.74
TRIM49-201ENST00000329758 ARID3CA6NKF2 412 aa10.4□□□□□ -0.74
TRIM49-201ENST00000329758 SNAPC4Q5SXM2 1469 aa10.4□□□□□ -0.74
TRIM49-201ENST00000329758 FAM50AQ14320 339 aaKnown RBP10.39□□□□□ -0.75
TRIM49-201ENST00000329758 PHLDB1Q86UU1 1377 aa10.39□□□□□ -0.75
TRIM49-201ENST00000329758 CCNB3Q8WWL7 1395 aa10.39□□□□□ -0.75
TRIM49-201ENST00000329758 RTL5Q5HYW3 569 aaPredicted RBP10.39□□□□□ -0.75
TRIM49-201ENST00000329758 IL27Q8NEV9 243 aa10.39□□□□□ -0.75
TRIM49-201ENST00000329758 IQGAP2Q13576 1575 aa10.38□□□□□ -0.75
TRIM49-201ENST00000329758 RRBP1Q9P2E9 1410 aaKnown RBP10.38□□□□□ -0.75
TRIM49-201ENST00000329758 LRRC9Q6ZRR7 1453 aa10.37□□□□□ -0.75
TRIM49-201ENST00000329758 DHX57Q6P158 1386 aaKnown RBP10.37□□□□□ -0.75
TRIM49-201ENST00000329758 C11orf95C9JLR9 678 aaPredicted RBP10.36□□□□□ -0.75
TRIM49-201ENST00000329758 FYCO1Q9BQS8 1478 aa10.35□□□□□ -0.75
TRIM49-201ENST00000329758 GRIN2AQ12879 1464 aa10.34□□□□□ -0.75
TRIM49-201ENST00000329758 MAP3K1Q13233 1512 aa10.34□□□□□ -0.75
TRIM49-201ENST00000329758 PODXL2Q9NZ53 605 aa10.33□□□□□ -0.76
TRIM49-201ENST00000329758 NBR1Q14596 966 aa10.33□□□□□ -0.76
TRIM49-201ENST00000329758 GLIPR1L2Q4G1C9 344 aa10.33□□□□□ -0.76
TRIM49-201ENST00000329758 CEP170Q5SW79 1584 aa10.33□□□□□ -0.76
TRIM49-201ENST00000329758 CASKIN1Q8WXD9 1431 aa10.32□□□□□ -0.76
TRIM49-201ENST00000329758 MAGI1Q96QZ7 1491 aaPredicted RBP10.32□□□□□ -0.76
TRIM49-201ENST00000329758 FMN1Q68DA7 1419 aa10.31□□□□□ -0.76
TRIM49-201ENST00000329758 RAB3GAP2Q9H2M9 1393 aa10.31□□□□□ -0.76
TRIM49-201ENST00000329758 WASHC2AQ641Q2 1341 aa10.31□□□□□ -0.76
TRIM49-201ENST00000329758 RTN4Q9NQC3 1192 aaKnown RBP10.31□□□□□ -0.76
TRIM49-201ENST00000329758 SYNJ2O15056 1496 aa10.3□□□□□ -0.76
TRIM49-201ENST00000329758 UGGT2Q9NYU1 1516 aa10.29□□□□□ -0.76
TRIM49-201ENST00000329758 KIAA0556O60303 1618 aa10.29□□□□□ -0.76
TRIM49-201ENST00000329758 CCER2I3L3R5 266 aa10.28□□□□□ -0.76
TRIM49-201ENST00000329758 WASHC2CQ9Y4E1 1318 aa10.28□□□□□ -0.76
TRIM49-201ENST00000329758 KCNH8Q96L42 1107 aa10.28□□□□□ -0.76
TRIM49-201ENST00000329758 RSPH6AQ9H0K4 717 aa10.28□□□□□ -0.76
TRIM49-201ENST00000329758 DISP1Q96F81 1524 aa10.27□□□□□ -0.76
TRIM49-201ENST00000329758 KIAA0586Q9BVV6 1533 aa10.27□□□□□ -0.76
TRIM49-201ENST00000329758 FBLN2P98095 1184 aa10.27□□□□□ -0.77
TRIM49-201ENST00000329758 MTUS2Q5JR59 1369 aa10.27□□□□□ -0.77
TRIM49-201ENST00000329758 CHD1O14646 1710 aa10.26□□□□□ -0.77
TRIM49-201ENST00000329758 PLEKHG5O94827 1062 aa10.26□□□□□ -0.77
TRIM49-201ENST00000329758 SIN3AQ96ST3 1273 aa10.26□□□□□ -0.77
TRIM49-201ENST00000329758 USP35Q9P2H5 1018 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms