RNA–Protein interactions for RNA: ENST00000329043.7

NFXL1-201, Transcript of nuclear transcription factor, X-box binding like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFXL1, Length 3,723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFXL1-201ENST00000329043 IGF1RP08069 1367 aa17.7■□□□□ 0.42
NFXL1-201ENST00000329043 CUX1P39880 1505 aa17.7■□□□□ 0.42
NFXL1-201ENST00000329043 CLSPNQ9HAW4 1339 aa17.69■□□□□ 0.42
NFXL1-201ENST00000329043 ARHGAP35Q9NRY4 1499 aa17.68■□□□□ 0.42
NFXL1-201ENST00000329043 FHOD3Q2V2M9 1422 aa17.66■□□□□ 0.42
NFXL1-201ENST00000329043 TOP2BQ02880 1626 aa17.66■□□□□ 0.42
NFXL1-201ENST00000329043 PHLDB1Q86UU1 1377 aa17.66■□□□□ 0.42
NFXL1-201ENST00000329043 TONSLQ96HA7 1378 aa17.65■□□□□ 0.42
NFXL1-201ENST00000329043 ZNF326Q5BKZ1 582 aaKnown RBP17.63■□□□□ 0.41
NFXL1-201ENST00000329043 SETD5Q9C0A6 1442 aa17.63■□□□□ 0.41
NFXL1-201ENST00000329043 FOXD1Q16676 465 aa17.63■□□□□ 0.41
NFXL1-201ENST00000329043 MTUS2Q5JR59 1369 aa17.62■□□□□ 0.41
NFXL1-201ENST00000329043 HNRNPUQ00839 825 aaKnown RBP eCLIP17.61■□□□□ 0.41
NFXL1-201ENST00000329043 TDRD9Q8NDG6 1382 aaKnown RBP17.59■□□□□ 0.41
NFXL1-201ENST00000329043 TSHZ2Q9NRE2 1034 aa17.59■□□□□ 0.41
NFXL1-201ENST00000329043 PEG3Q9GZU2 1588 aa17.58■□□□□ 0.41
NFXL1-201ENST00000329043 RAD54L2Q9Y4B4 1467 aa17.57■□□□□ 0.4
NFXL1-201ENST00000329043 CADPSQ9ULU8 1353 aa17.55■□□□□ 0.4
NFXL1-201ENST00000329043 RRBP1Q9P2E9 1410 aaKnown RBP17.55■□□□□ 0.4
NFXL1-201ENST00000329043 FAM9BQ8IZU0 186 aa17.55■□□□□ 0.4
NFXL1-201ENST00000329043 PPP1R15AO75807 674 aaPredicted RBP17.55■□□□□ 0.4
NFXL1-201ENST00000329043 NCAPD3P42695 1498 aa17.54■□□□□ 0.4
NFXL1-201ENST00000329043 DNAJC5BQ9UF47 199 aa17.54■□□□□ 0.4
NFXL1-201ENST00000329043 FGD5Q6ZNL6 1462 aa17.53■□□□□ 0.4
NFXL1-201ENST00000329043 FBLN2P98095 1184 aa17.52■□□□□ 0.4
NFXL1-201ENST00000329043 ZNF777Q9ULD5 760 aaPredicted RBP17.51■□□□□ 0.39
NFXL1-201ENST00000329043 CFTRP13569 1480 aa17.5■□□□□ 0.39
NFXL1-201ENST00000329043 ERICH3Q5RHP9 1530 aa17.49■□□□□ 0.39
NFXL1-201ENST00000329043 WDR97A6NE52 1622 aa17.45■□□□□ 0.38
NFXL1-201ENST00000329043 LRRC9Q6ZRR7 1453 aa17.45■□□□□ 0.38
NFXL1-201ENST00000329043 NESP48681 1621 aa17.44■□□□□ 0.38
NFXL1-201ENST00000329043 FHAD1B1AJZ9 1412 aa17.44■□□□□ 0.38
NFXL1-201ENST00000329043 ERICH6Q7L0X2 663 aa17.41■□□□□ 0.38
NFXL1-201ENST00000329043 FANCD2Q9BXW9 1451 aa17.4■□□□□ 0.38
NFXL1-201ENST00000329043 HSPA5P11021 654 aaKnown RBP17.39■□□□□ 0.38
NFXL1-201ENST00000329043 BIVM-ERCC5R4GMW8 1640 aa17.38■□□□□ 0.37
NFXL1-201ENST00000329043 MRS2Q9HD23 443 aa17.36■□□□□ 0.37
NFXL1-201ENST00000329043 SALL2Q9Y467 1007 aaPredicted RBP17.36■□□□□ 0.37
NFXL1-201ENST00000329043 MAPKBP1O60336 1514 aa17.35■□□□□ 0.37
NFXL1-201ENST00000329043 TIAM1Q13009 1591 aa17.34■□□□□ 0.37
NFXL1-201ENST00000329043 RBM19Q9Y4C8 960 aaKnown RBP17.34■□□□□ 0.37
NFXL1-201ENST00000329043 EIF4G2P78344 907 aaKnown RBP eCLIP17.33■□□□□ 0.37
NFXL1-201ENST00000329043 CCDC184Q52MB2 194 aa17.33■□□□□ 0.36
NFXL1-201ENST00000329043 SLC4A1APQ9BWU0 796 aaKnown RBP17.33■□□□□ 0.36
NFXL1-201ENST00000329043 L3MBTL2Q969R5 705 aa17.31■□□□□ 0.36
NFXL1-201ENST00000329043 KDM2AQ9Y2K7 1162 aa17.31■□□□□ 0.36
NFXL1-201ENST00000329043 HMGXB3Q12766 1538 aa17.29■□□□□ 0.36
NFXL1-201ENST00000329043 ANP32EQ9BTT0 268 aa17.29■□□□□ 0.36
NFXL1-201ENST00000329043 CDK11AQ9UQ88 783 aaPredicted RBP17.29■□□□□ 0.36
NFXL1-201ENST00000329043 ZNF644Q9H582 1327 aaPredicted RBP17.29■□□□□ 0.36
NFXL1-201ENST00000329043 B4GALNT3Q6L9W6 998 aa17.28■□□□□ 0.36
NFXL1-201ENST00000329043 MPHOSPH9Q99550 1183 aa17.28■□□□□ 0.36
NFXL1-201ENST00000329043 CCDC18Q5T9S5 1454 aa17.26■□□□□ 0.35
NFXL1-201ENST00000329043 FGD6Q6ZV73 1430 aa17.26■□□□□ 0.35
NFXL1-201ENST00000329043 CCER2I3L3R5 266 aa17.25■□□□□ 0.35
NFXL1-201ENST00000329043 PCF11O94913 1555 aaKnown RBP17.25■□□□□ 0.35
NFXL1-201ENST00000329043 PTPRKQ15262 1439 aa17.24■□□□□ 0.35
NFXL1-201ENST00000329043 TIMELESSQ9UNS1 1208 aa17.23■□□□□ 0.35
NFXL1-201ENST00000329043 POLA1P09884 1462 aaPredicted RBP17.23■□□□□ 0.35
NFXL1-201ENST00000329043 WASHC2AQ641Q2 1341 aa17.22■□□□□ 0.35
NFXL1-201ENST00000329043 FMN1Q68DA7 1419 aa17.22■□□□□ 0.35
NFXL1-201ENST00000329043 C11orf95C9JLR9 678 aaPredicted RBP17.21■□□□□ 0.35
NFXL1-201ENST00000329043 CASKIN1Q8WXD9 1431 aa17.17■□□□□ 0.34
NFXL1-201ENST00000329043 CC2D2AQ9P2K1 1620 aa17.17■□□□□ 0.34
NFXL1-201ENST00000329043 AQRO60306 1485 aaKnown RBP eCLIP17.17■□□□□ 0.342e-6■■■■■ 26.9
NFXL1-201ENST00000329043 TOPBP1Q92547 1522 aa17.16■□□□□ 0.34
NFXL1-201ENST00000329043 NCOA2Q15596 1464 aa17.15■□□□□ 0.34
NFXL1-201ENST00000329043 CFDP1Q9UEE9 299 aaPredicted RBP17.14■□□□□ 0.34
NFXL1-201ENST00000329043 NBPF8Q3BBV2 869 aa17.14■□□□□ 0.33
NFXL1-201ENST00000329043 RGL3Q3MIN7 710 aa17.13■□□□□ 0.33
NFXL1-201ENST00000329043 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.13■□□□□ 0.331e-6■■■■□ 21.3
NFXL1-201ENST00000329043 GAPVD1Q14C86 1478 aa17.11■□□□□ 0.33
NFXL1-201ENST00000329043 CHMP7Q8WUX9 453 aaPredicted RBP17.11■□□□□ 0.33
NFXL1-201ENST00000329043 UACAQ9BZF9 1416 aa17.11■□□□□ 0.33
NFXL1-201ENST00000329043 PDS5BQ9NTI5 1447 aa17.11■□□□□ 0.33
NFXL1-201ENST00000329043 NAIPQ13075 1403 aa17.1■□□□□ 0.33
NFXL1-201ENST00000329043 MYOM3Q5VTT5 1437 aa17.1■□□□□ 0.33
NFXL1-201ENST00000329043 FYCO1Q9BQS8 1478 aa17.09■□□□□ 0.33
NFXL1-201ENST00000329043 PRKRIP1Q9H875 184 aaPredicted RBP17.08■□□□□ 0.33
NFXL1-201ENST00000329043 TMC1Q8TDI8 760 aa17.08■□□□□ 0.32
NFXL1-201ENST00000329043 PKD2Q13563 968 aa17.08■□□□□ 0.32
NFXL1-201ENST00000329043 NBR1Q14596 966 aa17.08■□□□□ 0.32
NFXL1-201ENST00000329043 NPM2Q86SE8 214 aaKnown RBP17.06■□□□□ 0.32
NFXL1-201ENST00000329043 HFM1A2PYH4 1435 aa17.05■□□□□ 0.32
NFXL1-201ENST00000329043 CCDC136Q96JN2 1154 aa17.03■□□□□ 0.32
NFXL1-201ENST00000329043 CARD11Q9BXL7 1154 aa17.02■□□□□ 0.32
NFXL1-201ENST00000329043 ABCA10Q8WWZ4 1543 aa17.02■□□□□ 0.32
NFXL1-201ENST00000329043 CDK13Q14004 1512 aaKnown RBP17.01■□□□□ 0.31
NFXL1-201ENST00000329043 MYT1LQ9UL68 1186 aa17.01■□□□□ 0.31
NFXL1-201ENST00000329043 DCAF11Q8TEB1 546 aa17.01■□□□□ 0.31
NFXL1-201ENST00000329043 PPP4R2Q9NY27 417 aa17.01■□□□□ 0.31
NFXL1-201ENST00000329043 KIF7Q2M1P5 1343 aa17.01■□□□□ 0.31
NFXL1-201ENST00000329043 URB2Q14146 1524 aaKnown RBP17■□□□□ 0.31
NFXL1-201ENST00000329043 MSH5O43196 834 aa17■□□□□ 0.31
NFXL1-201ENST00000329043 MAP3K1Q13233 1512 aa16.99■□□□□ 0.31
NFXL1-201ENST00000329043 DNMBPQ6XZF7 1577 aa16.98■□□□□ 0.31
NFXL1-201ENST00000329043 TSPY4P0CV99 314 aa16.96■□□□□ 0.31
NFXL1-201ENST00000329043 TSPY10P0CW01 314 aa16.96■□□□□ 0.31
NFXL1-201ENST00000329043 CCDC7Q96M83 1385 aa16.96■□□□□ 0.31
NFXL1-201ENST00000329043 HNRNPMP52272 730 aaKnown RBP eCLIP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms