RNA–Protein interactions for RNA: ENST00000326197.11

SCMH1-201, Transcript of Scm polycomb group protein homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCMH1, Length 3,275 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-201ENST00000326197 TOP2BQ02880 1626 aa14.21□□□□□ -0.13
SCMH1-201ENST00000326197 IRX6P78412 446 aaPredicted RBP14.21□□□□□ -0.14
SCMH1-201ENST00000326197 ERICH3Q5RHP9 1530 aa14.2□□□□□ -0.14
SCMH1-201ENST00000326197 HNRNPUQ00839 825 aaKnown RBP eCLIP14.18□□□□□ -0.14
SCMH1-201ENST00000326197 PEG3Q9GZU2 1588 aa14.17□□□□□ -0.14
SCMH1-201ENST00000326197 TONSLQ96HA7 1378 aa14.17□□□□□ -0.14
SCMH1-201ENST00000326197 ARHGAP35Q9NRY4 1499 aa14.16□□□□□ -0.14
SCMH1-201ENST00000326197 CDK11AQ9UQ88 783 aaPredicted RBP14.16□□□□□ -0.14
SCMH1-201ENST00000326197 WDR97A6NE52 1622 aa14.14□□□□□ -0.15
SCMH1-201ENST00000326197 CCER2I3L3R5 266 aa14.14□□□□□ -0.15
SCMH1-201ENST00000326197 PPP1R15AO75807 674 aaPredicted RBP14.14□□□□□ -0.15
SCMH1-201ENST00000326197 CUX2O14529 1486 aa14.1□□□□□ -0.15
SCMH1-201ENST00000326197 MAPKBP1O60336 1514 aa14.1□□□□□ -0.15
SCMH1-201ENST00000326197 PHLDB1Q86UU1 1377 aa14.1□□□□□ -0.15
SCMH1-201ENST00000326197 TIMELESSQ9UNS1 1208 aa14.08□□□□□ -0.16
SCMH1-201ENST00000326197 CUX1P39880 1505 aa14.08□□□□□ -0.16
SCMH1-201ENST00000326197 CARMIL1Q5VZK9 1371 aa14.07□□□□□ -0.16
SCMH1-201ENST00000326197 CNGB1Q14028 1251 aaPredicted RBP14.07□□□□□ -0.16
SCMH1-201ENST00000326197 BIVM-ERCC5R4GMW8 1640 aa14.06□□□□□ -0.16
SCMH1-201ENST00000326197 LRRC9Q6ZRR7 1453 aa14.04□□□□□ -0.16
SCMH1-201ENST00000326197 FHAD1B1AJZ9 1412 aa14.02□□□□□ -0.16
SCMH1-201ENST00000326197 TIAM1Q13009 1591 aa14.02□□□□□ -0.16
SCMH1-201ENST00000326197 IGF1RP08069 1367 aa14.02□□□□□ -0.16
SCMH1-201ENST00000326197 FAM9BQ8IZU0 186 aa14.01□□□□□ -0.17
SCMH1-201ENST00000326197 CC2D2AQ9P2K1 1620 aa14.01□□□□□ -0.17
SCMH1-201ENST00000326197 MTUS2Q5JR59 1369 aa13.98□□□□□ -0.17
SCMH1-201ENST00000326197 CHIC2Q9UKJ5 165 aa13.98□□□□□ -0.17
SCMH1-201ENST00000326197 FHOD3Q2V2M9 1422 aa13.98□□□□□ -0.17
SCMH1-201ENST00000326197 MSH5O43196 834 aa13.98□□□□□ -0.17
SCMH1-201ENST00000326197 POLR3GLQ9BT43 218 aa13.97□□□□□ -0.17
SCMH1-201ENST00000326197 RRP7BPQ9NSQ0 103 aa13.95□□□□□ -0.18
SCMH1-201ENST00000326197 B4GALNT3Q6L9W6 998 aa13.94□□□□□ -0.18
SCMH1-201ENST00000326197 MRS2Q9HD23 443 aa13.94□□□□□ -0.18
SCMH1-201ENST00000326197 HSPA5P11021 654 aaKnown RBP13.93□□□□□ -0.18
SCMH1-201ENST00000326197 PPP4R2Q9NY27 417 aa13.93□□□□□ -0.18
SCMH1-201ENST00000326197 EIF4G2P78344 907 aaKnown RBP eCLIP13.92□□□□□ -0.18
SCMH1-201ENST00000326197 CCDC18Q5T9S5 1454 aa13.91□□□□□ -0.18
SCMH1-201ENST00000326197 CFTRP13569 1480 aa13.9□□□□□ -0.18
SCMH1-201ENST00000326197 FANCIQ9NVI1 1328 aa13.89□□□□□ -0.19
SCMH1-201ENST00000326197 ARID3CA6NKF2 412 aa13.89□□□□□ -0.19
SCMH1-201ENST00000326197 MAP3K1Q13233 1512 aa13.89□□□□□ -0.19
SCMH1-201ENST00000326197 NCAPD3P42695 1498 aa13.89□□□□□ -0.19
SCMH1-201ENST00000326197 NBR1Q14596 966 aa13.89□□□□□ -0.19
SCMH1-201ENST00000326197 FGD5Q6ZNL6 1462 aa13.87□□□□□ -0.19
SCMH1-201ENST00000326197 SENP3-EIF4A1A0A087X0R7 540 aa13.87□□□□□ -0.19
SCMH1-201ENST00000326197 PCF11O94913 1555 aaKnown RBP13.87□□□□□ -0.19
SCMH1-201ENST00000326197 FGD6Q6ZV73 1430 aa13.86□□□□□ -0.19
SCMH1-201ENST00000326197 WASHC2AQ641Q2 1341 aa13.85□□□□□ -0.19
SCMH1-201ENST00000326197 CCDC184Q52MB2 194 aa13.85□□□□□ -0.19
SCMH1-201ENST00000326197 UACAQ9BZF9 1416 aa13.84□□□□□ -0.19
SCMH1-201ENST00000326197 FOXD1Q16676 465 aa13.84□□□□□ -0.19
SCMH1-201ENST00000326197 ZNF326Q5BKZ1 582 aaKnown RBP13.83□□□□□ -0.2
SCMH1-201ENST00000326197 HMGXB3Q12766 1538 aa13.82□□□□□ -0.2
SCMH1-201ENST00000326197 DEKP35659 375 aaKnown RBP13.81□□□□□ -0.2
SCMH1-201ENST00000326197 CADPSQ9ULU8 1353 aa13.81□□□□□ -0.2
SCMH1-201ENST00000326197 ERICH6BQ5W0A0 696 aa13.81□□□□□ -0.2
SCMH1-201ENST00000326197 FMN1Q68DA7 1419 aa13.8□□□□□ -0.2
SCMH1-201ENST00000326197 CASKIN1Q8WXD9 1431 aa13.8□□□□□ -0.2
SCMH1-201ENST00000326197 CCDC136Q96JN2 1154 aa13.8□□□□□ -0.2
SCMH1-201ENST00000326197 RTL5Q5HYW3 569 aaPredicted RBP13.79□□□□□ -0.2
SCMH1-201ENST00000326197 FYCO1Q9BQS8 1478 aa13.79□□□□□ -0.2
SCMH1-201ENST00000326197 L3MBTL2Q969R5 705 aa13.79□□□□□ -0.2
SCMH1-201ENST00000326197 MYT1LQ9UL68 1186 aa13.79□□□□□ -0.2
SCMH1-201ENST00000326197 PRKRIP1Q9H875 184 aaPredicted RBP13.79□□□□□ -0.2
SCMH1-201ENST00000326197 ANP32AP39687 249 aaKnown RBP13.78□□□□□ -0.2
SCMH1-201ENST00000326197 NOP58Q9Y2X3 529 aaKnown RBP13.78□□□□□ -0.2
SCMH1-201ENST00000326197 HFM1A2PYH4 1435 aa13.78□□□□□ -0.2
SCMH1-201ENST00000326197 RAD54L2Q9Y4B4 1467 aa13.77□□□□□ -0.21
SCMH1-201ENST00000326197 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.76□□□□□ -0.21
SCMH1-201ENST00000326197 PTPRKQ15262 1439 aa13.76□□□□□ -0.21
SCMH1-201ENST00000326197 CFAP43Q8NDM7 1665 aa13.75□□□□□ -0.21
SCMH1-201ENST00000326197 MPHOSPH9Q99550 1183 aa13.75□□□□□ -0.21
SCMH1-201ENST00000326197 NAIPQ13075 1403 aa13.75□□□□□ -0.21
SCMH1-201ENST00000326197 NPM2Q86SE8 214 aaKnown RBP13.74□□□□□ -0.21
SCMH1-201ENST00000326197 CNTLNQ9NXG0 1405 aa13.73□□□□□ -0.21
SCMH1-201ENST00000326197 ZBED9Q6R2W3 1325 aa13.73□□□□□ -0.21
SCMH1-201ENST00000326197 C11orf95C9JLR9 678 aaPredicted RBP13.73□□□□□ -0.21
SCMH1-201ENST00000326197 AQRO60306 1485 aaKnown RBP eCLIP13.73□□□□□ -0.211e-6■■□□□ 11.4
SCMH1-201ENST00000326197 MYOM3Q5VTT5 1437 aa13.72□□□□□ -0.21
SCMH1-201ENST00000326197 NCOA2Q15596 1464 aa13.72□□□□□ -0.21
SCMH1-201ENST00000326197 SLC4A1APQ9BWU0 796 aaKnown RBP13.72□□□□□ -0.21
SCMH1-201ENST00000326197 PTPN23Q9H3S7 1636 aa13.71□□□□□ -0.21
SCMH1-201ENST00000326197 ZBTB47Q9UFB7 747 aaPredicted RBP13.71□□□□□ -0.21
SCMH1-201ENST00000326197 NESP48681 1621 aa13.71□□□□□ -0.21
SCMH1-201ENST00000326197 CCDC7Q96M83 1385 aa13.71□□□□□ -0.22
SCMH1-201ENST00000326197 EFCAB5A4FU69 1503 aa13.69□□□□□ -0.22
SCMH1-201ENST00000326197 FANCD2Q9BXW9 1451 aa13.69□□□□□ -0.22
SCMH1-201ENST00000326197 TDRD9Q8NDG6 1382 aaKnown RBP13.69□□□□□ -0.22
SCMH1-201ENST00000326197 PAK3O75914 559 aaPredicted RBP13.69□□□□□ -0.22
SCMH1-201ENST00000326197 SALL2Q9Y467 1007 aaPredicted RBP13.69□□□□□ -0.22
SCMH1-201ENST00000326197 TMC1Q8TDI8 760 aa13.68□□□□□ -0.22
SCMH1-201ENST00000326197 KIF7Q2M1P5 1343 aa13.66□□□□□ -0.22
SCMH1-201ENST00000326197 NBPF8Q3BBV2 869 aa13.65□□□□□ -0.22
SCMH1-201ENST00000326197 AKNAQ7Z591 1439 aa13.64□□□□□ -0.23
SCMH1-201ENST00000326197 NUDCQ9Y266 331 aa13.64□□□□□ -0.23
SCMH1-201ENST00000326197 ZNF777Q9ULD5 760 aaPredicted RBP13.62□□□□□ -0.23
SCMH1-201ENST00000326197 POLA1P09884 1462 aaPredicted RBP13.62□□□□□ -0.23
SCMH1-201ENST00000326197 IPO9Q96P70 1041 aaKnown RBP13.61□□□□□ -0.23
SCMH1-201ENST00000326197 NCOA1Q15788 1441 aa13.59□□□□□ -0.23
SCMH1-201ENST00000326197 SUPT6HQ7KZ85 1726 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms