RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 VPS8Q8N3P4 1428 aa16.51■□□□□ 0.23
DDR1-223ENST00000324771 CADPSQ9ULU8 1353 aa16.49■□□□□ 0.23
DDR1-223ENST00000324771 TSPY4P0CV99 314 aa16.46■□□□□ 0.23
DDR1-223ENST00000324771 TSPY10P0CW01 314 aa16.46■□□□□ 0.23
DDR1-223ENST00000324771 CHGAP10645 457 aaKnown RBP16.46■□□□□ 0.22
DDR1-223ENST00000324771 FAM9BQ8IZU0 186 aa16.46■□□□□ 0.22
DDR1-223ENST00000324771 CCNB3Q8WWL7 1395 aa16.45■□□□□ 0.22
DDR1-223ENST00000324771 SALL2Q9Y467 1007 aaPredicted RBP16.45■□□□□ 0.22
DDR1-223ENST00000324771 EIF4G1Q04637 1599 aaKnown RBP16.42■□□□□ 0.22
DDR1-223ENST00000324771 HNRNPUQ00839 825 aaKnown RBP eCLIP16.42■□□□□ 0.22
DDR1-223ENST00000324771 CFDP1Q9UEE9 299 aaPredicted RBP16.42■□□□□ 0.22
DDR1-223ENST00000324771 ERCC6Q03468 1493 aa16.42■□□□□ 0.22
DDR1-223ENST00000324771 PLEKHD1A6NEE1 506 aa16.42■□□□□ 0.22
DDR1-223ENST00000324771 RGL3Q3MIN7 710 aa16.41■□□□□ 0.22
DDR1-223ENST00000324771 FOXD1Q16676 465 aa16.4■□□□□ 0.22
DDR1-223ENST00000324771 PLPPR3Q6T4P5 718 aa16.39■□□□□ 0.21
DDR1-223ENST00000324771 DNAJC5BQ9UF47 199 aa16.38■□□□□ 0.21
DDR1-223ENST00000324771 FKBP8Q14318 412 aa16.38■□□□□ 0.21
DDR1-223ENST00000324771 FHOD3Q2V2M9 1422 aa16.36■□□□□ 0.21
DDR1-223ENST00000324771 IRX6P78412 446 aaPredicted RBP16.34■□□□□ 0.21
DDR1-223ENST00000324771 NPM1P06748 294 aaKnown RBP eCLIP16.32■□□□□ 0.2
DDR1-223ENST00000324771 FHAD1B1AJZ9 1412 aa16.29■□□□□ 0.2
DDR1-223ENST00000324771 RAD54L2Q9Y4B4 1467 aa16.29■□□□□ 0.2
DDR1-223ENST00000324771 PDS5BQ9NTI5 1447 aa16.28■□□□□ 0.2
DDR1-223ENST00000324771 EIF4G2P78344 907 aaKnown RBP eCLIP16.28■□□□□ 0.28e-8■■■■■ 39.6
DDR1-223ENST00000324771 FANCD2Q9BXW9 1451 aa16.27■□□□□ 0.2
DDR1-223ENST00000324771 IGF1RP08069 1367 aa16.27■□□□□ 0.2
DDR1-223ENST00000324771 RAB3GAP2Q9H2M9 1393 aa16.27■□□□□ 0.19
DDR1-223ENST00000324771 MRS2Q9HD23 443 aa16.27■□□□□ 0.19
DDR1-223ENST00000324771 BCL11AQ9H165 835 aa16.23■□□□□ 0.19
DDR1-223ENST00000324771 NCAPD3P42695 1498 aa16.21■□□□□ 0.19
DDR1-223ENST00000324771 SYNJ1O43426 1573 aa16.21■□□□□ 0.19
DDR1-223ENST00000324771 NESP48681 1621 aa16.21■□□□□ 0.18
DDR1-223ENST00000324771 FGD5Q6ZNL6 1462 aa16.2■□□□□ 0.18
DDR1-223ENST00000324771 SETD5Q9C0A6 1442 aa16.19■□□□□ 0.18
DDR1-223ENST00000324771 TMC1Q8TDI8 760 aa16.19■□□□□ 0.18
DDR1-223ENST00000324771 CLSPNQ9HAW4 1339 aa16.18■□□□□ 0.18
DDR1-223ENST00000324771 BICRAQ9NZM4 1560 aa16.16■□□□□ 0.18
DDR1-223ENST00000324771 ARHGAP35Q9NRY4 1499 aa16.15■□□□□ 0.18
DDR1-223ENST00000324771 STAG3Q9UJ98 1225 aa16.14■□□□□ 0.17
DDR1-223ENST00000324771 JPH4Q96JJ6 628 aa16.12■□□□□ 0.17
DDR1-223ENST00000324771 CARD11Q9BXL7 1154 aa16.12■□□□□ 0.17
DDR1-223ENST00000324771 DHX57Q6P158 1386 aaKnown RBP16.1■□□□□ 0.17
DDR1-223ENST00000324771 PKD2Q13563 968 aa16.09■□□□□ 0.17
DDR1-223ENST00000324771 DCAF11Q8TEB1 546 aa16.09■□□□□ 0.17
DDR1-223ENST00000324771 DAXXQ9UER7 740 aaPredicted RBP16.09■□□□□ 0.17
DDR1-223ENST00000324771 FMN1Q68DA7 1419 aa16.09■□□□□ 0.17
DDR1-223ENST00000324771 AQRO60306 1485 aaKnown RBP eCLIP16.08■□□□□ 0.171e-7■■■■■ 41.3
DDR1-223ENST00000324771 MPHOSPH9Q99550 1183 aa16.08■□□□□ 0.17
DDR1-223ENST00000324771 HNRNPMP52272 730 aaKnown RBP eCLIP16.08■□□□□ 0.16
DDR1-223ENST00000324771 ARAP1Q96P48 1450 aa16.07■□□□□ 0.16
DDR1-223ENST00000324771 KIF21BO75037 1637 aa16.06■□□□□ 0.16
DDR1-223ENST00000324771 HSPA5P11021 654 aaKnown RBP16.06■□□□□ 0.16
DDR1-223ENST00000324771 ESF1Q9H501 851 aaKnown RBP16.06■□□□□ 0.16
DDR1-223ENST00000324771 PPP1R15AO75807 674 aaPredicted RBP16.05■□□□□ 0.16
DDR1-223ENST00000324771 CFTRP13569 1480 aa16.05■□□□□ 0.16
DDR1-223ENST00000324771 ZNF644Q9H582 1327 aaPredicted RBP16.05■□□□□ 0.16
DDR1-223ENST00000324771 SUPT16HQ9Y5B9 1047 aaKnown RBP16.04■□□□□ 0.16
DDR1-223ENST00000324771 L3MBTL2Q969R5 705 aa16.04■□□□□ 0.16
DDR1-223ENST00000324771 SLC24A1O60721 1099 aa16.03■□□□□ 0.16
DDR1-223ENST00000324771 PHLDB1Q86UU1 1377 aa16.03■□□□□ 0.16
DDR1-223ENST00000324771 CANXP27824 592 aaKnown RBP16.02■□□□□ 0.15
DDR1-223ENST00000324771 CUX1P39880 1505 aa16.01■□□□□ 0.15
DDR1-223ENST00000324771 GAPVD1Q14C86 1478 aa16.01■□□□□ 0.15
DDR1-223ENST00000324771 NPM2Q86SE8 214 aaKnown RBP16■□□□□ 0.15
DDR1-223ENST00000324771 PLEKHG5O94827 1062 aa15.98■□□□□ 0.15
DDR1-223ENST00000324771 NUP155O75694 1391 aa15.96■□□□□ 0.15
DDR1-223ENST00000324771 CC2D1BQ5T0F9 858 aaKnown RBP15.96■□□□□ 0.15
DDR1-223ENST00000324771 CC2D2AQ9P2K1 1620 aa15.96■□□□□ 0.15
DDR1-223ENST00000324771 GGT6Q6P531 493 aa15.95■□□□□ 0.14
DDR1-223ENST00000324771 CARMIL2Q6F5E8 1435 aa15.94■□□□□ 0.14
DDR1-223ENST00000324771 TNNT2P45379 298 aaPredicted RBP15.94■□□□□ 0.14
DDR1-223ENST00000324771 PRXQ9BXM0 1461 aa15.94■□□□□ 0.14
DDR1-223ENST00000324771 CCDC136Q96JN2 1154 aa15.93■□□□□ 0.14
DDR1-223ENST00000324771 MLECQ14165 292 aa15.92■□□□□ 0.14
DDR1-223ENST00000324771 WDR43Q15061 677 aaKnown RBP eCLIP15.91■□□□□ 0.14
DDR1-223ENST00000324771 SAFB2Q14151 953 aaKnown RBP eCLIP15.9■□□□□ 0.14
DDR1-223ENST00000324771 TIMELESSQ9UNS1 1208 aa15.89■□□□□ 0.13
DDR1-223ENST00000324771 NEUROD2Q15784 382 aa15.88■□□□□ 0.13
DDR1-223ENST00000324771 UNC13AQ9UPW8 1703 aa15.88■□□□□ 0.13
DDR1-223ENST00000324771 POLA1P09884 1462 aaPredicted RBP15.88■□□□□ 0.13
DDR1-223ENST00000324771 TOP2BQ02880 1626 aa15.87■□□□□ 0.13
DDR1-223ENST00000324771 NUTM2DQ5VT03 806 aaPredicted RBP15.84■□□□□ 0.13
DDR1-223ENST00000324771 ARID4BQ4LE39 1312 aaPredicted RBP15.84■□□□□ 0.13
DDR1-223ENST00000324771 TOPBP1Q92547 1522 aa15.84■□□□□ 0.13
DDR1-223ENST00000324771 NEFMP07197 916 aa15.84■□□□□ 0.13
DDR1-223ENST00000324771 KNSTRNQ9Y448 316 aa15.84■□□□□ 0.13
DDR1-223ENST00000324771 LRRC9Q6ZRR7 1453 aa15.84■□□□□ 0.13
DDR1-223ENST00000324771 KIF3BO15066 747 aa15.83■□□□□ 0.12
DDR1-223ENST00000324771 EFCAB2Q5VUJ9 269 aa15.83■□□□□ 0.12
DDR1-223ENST00000324771 PPM1GO15355 546 aaPredicted RBP15.83■□□□□ 0.12
DDR1-223ENST00000324771 HMGXB3Q12766 1538 aa15.81■□□□□ 0.12
DDR1-223ENST00000324771 RTL5Q5HYW3 569 aaPredicted RBP15.81■□□□□ 0.12
DDR1-223ENST00000324771 B4GALNT3Q6L9W6 998 aa15.81■□□□□ 0.12
DDR1-223ENST00000324771 ANKRD30AQ9BXX3 1397 aa15.81■□□□□ 0.12
DDR1-223ENST00000324771 PTPRGP23470 1445 aa15.81■□□□□ 0.12
DDR1-223ENST00000324771 FGD6Q6ZV73 1430 aa15.8■□□□□ 0.12
DDR1-223ENST00000324771 CCDC18Q5T9S5 1454 aa15.79■□□□□ 0.12
DDR1-223ENST00000324771 STK26Q9P289 416 aa15.77■□□□□ 0.12
DDR1-223ENST00000324771 ST20-MTHFSA0A0A6YYL1 179 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms