RNA–Protein interactions for RNA: ENST00000324309.8

CCDC149-201, Transcript of coiled-coil domain containing 149, humanhuman

TSL 2

Gene CCDC149, Length 5,604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-201ENST00000324309 NEFMP07197 916 aa17.83■□□□□ 0.44
CCDC149-201ENST00000324309 BICRAQ9NZM4 1560 aa17.82■□□□□ 0.44
CCDC149-201ENST00000324309 CHGAP10645 457 aaKnown RBP17.8■□□□□ 0.44
CCDC149-201ENST00000324309 OSCARQ8IYS5 282 aa17.79■□□□□ 0.44
CCDC149-201ENST00000324309 IFT140Q96RY7 1462 aa17.79■□□□□ 0.44
CCDC149-201ENST00000324309 LAMC3Q9Y6N6 1575 aa17.77■□□□□ 0.44
CCDC149-201ENST00000324309 GAPVD1Q14C86 1478 aa17.77■□□□□ 0.44
CCDC149-201ENST00000324309 KANK1Q14678 1352 aa17.76■□□□□ 0.43
CCDC149-201ENST00000324309 FGD5Q6ZNL6 1462 aa17.76■□□□□ 0.43
CCDC149-201ENST00000324309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.76■□□□□ 0.43
CCDC149-201ENST00000324309 ARID4BQ4LE39 1312 aaPredicted RBP17.73■□□□□ 0.43
CCDC149-201ENST00000324309 CHIC2Q9UKJ5 165 aa17.73■□□□□ 0.43
CCDC149-201ENST00000324309 ANP32CO43423 234 aa17.73■□□□□ 0.43
CCDC149-201ENST00000324309 VPS8Q8N3P4 1428 aa17.71■□□□□ 0.43
CCDC149-201ENST00000324309 GRIN2BQ13224 1484 aa17.71■□□□□ 0.43
CCDC149-201ENST00000324309 RSPH4AQ5TD94 716 aa17.7■□□□□ 0.42
CCDC149-201ENST00000324309 TRHP20396 242 aaPredicted RBP17.7■□□□□ 0.42
CCDC149-201ENST00000324309 HDGFP51858 240 aaKnown RBP17.7■□□□□ 0.42
CCDC149-201ENST00000324309 JPH4Q96JJ6 628 aa17.69■□□□□ 0.42
CCDC149-201ENST00000324309 EFCAB2Q5VUJ9 269 aa17.69■□□□□ 0.42
CCDC149-201ENST00000324309 ARHGAP35Q9NRY4 1499 aa17.67■□□□□ 0.42
CCDC149-201ENST00000324309 PPP1R15AO75807 674 aaPredicted RBP17.66■□□□□ 0.42
CCDC149-201ENST00000324309 PEG3Q9GZU2 1588 aa17.66■□□□□ 0.42
CCDC149-201ENST00000324309 CCDC18Q5T9S5 1454 aa17.66■□□□□ 0.42
CCDC149-201ENST00000324309 SLC24A1O60721 1099 aa17.63■□□□□ 0.41
CCDC149-201ENST00000324309 PTPRGP23470 1445 aa17.62■□□□□ 0.41
CCDC149-201ENST00000324309 DNMBPQ6XZF7 1577 aa17.62■□□□□ 0.41
CCDC149-201ENST00000324309 YTHDC1Q96MU7 727 aaKnown RBP17.6■□□□□ 0.41
CCDC149-201ENST00000324309 ERICH6Q7L0X2 663 aa17.58■□□□□ 0.4
CCDC149-201ENST00000324309 ZNF316A6NFI3 1004 aaPredicted RBP17.58■□□□□ 0.4
CCDC149-201ENST00000324309 DIEXFQ68CQ4 756 aaKnown RBP17.57■□□□□ 0.4
CCDC149-201ENST00000324309 RRP7BPQ9NSQ0 103 aa17.57■□□□□ 0.4
CCDC149-201ENST00000324309 CDCA8Q53HL2 280 aa17.57■□□□□ 0.4
CCDC149-201ENST00000324309 PLPPR3Q6T4P5 718 aa17.55■□□□□ 0.4
CCDC149-201ENST00000324309 TOPBP1Q92547 1522 aa17.55■□□□□ 0.4
CCDC149-201ENST00000324309 CLSPNQ9HAW4 1339 aa17.54■□□□□ 0.4
CCDC149-201ENST00000324309 UNC13AQ9UPW8 1703 aa17.52■□□□□ 0.4
CCDC149-201ENST00000324309 IGF1RP08069 1367 aa17.52■□□□□ 0.4
CCDC149-201ENST00000324309 RAD54L2Q9Y4B4 1467 aa17.51■□□□□ 0.39
CCDC149-201ENST00000324309 ANKRD30AQ9BXX3 1397 aa17.51■□□□□ 0.39
CCDC149-201ENST00000324309 TOP2BQ02880 1626 aa17.5■□□□□ 0.39
CCDC149-201ENST00000324309 ERICH3Q5RHP9 1530 aa17.49■□□□□ 0.39
CCDC149-201ENST00000324309 CNGB1Q14028 1251 aaPredicted RBP17.49■□□□□ 0.39
CCDC149-201ENST00000324309 NESP48681 1621 aa17.45■□□□□ 0.38
CCDC149-201ENST00000324309 FHOD3Q2V2M9 1422 aa17.45■□□□□ 0.38
CCDC149-201ENST00000324309 TIMELESSQ9UNS1 1208 aa17.45■□□□□ 0.38
CCDC149-201ENST00000324309 AQRO60306 1485 aaKnown RBP eCLIP17.44■□□□□ 0.38
CCDC149-201ENST00000324309 ZBTB47Q9UFB7 747 aaPredicted RBP17.43■□□□□ 0.38
CCDC149-201ENST00000324309 POLA1P09884 1462 aaPredicted RBP17.41■□□□□ 0.38
CCDC149-201ENST00000324309 EFCAB5A4FU69 1503 aa17.41■□□□□ 0.38
CCDC149-201ENST00000324309 KIF21BO75037 1637 aa17.4■□□□□ 0.38
CCDC149-201ENST00000324309 EIF4G2P78344 907 aaKnown RBP eCLIP17.4■□□□□ 0.38
CCDC149-201ENST00000324309 C14orf37Q86TY3 774 aa17.4■□□□□ 0.38
CCDC149-201ENST00000324309 SPAG9O60271 1321 aaKnown RBP17.38■□□□□ 0.37
CCDC149-201ENST00000324309 DAXXQ9UER7 740 aaPredicted RBP17.38■□□□□ 0.37
CCDC149-201ENST00000324309 KDM2AQ9Y2K7 1162 aa17.37■□□□□ 0.37
CCDC149-201ENST00000324309 ABCA10Q8WWZ4 1543 aa17.37■□□□□ 0.37
CCDC149-201ENST00000324309 CUX1P39880 1505 aa17.36■□□□□ 0.37
CCDC149-201ENST00000324309 SETD5Q9C0A6 1442 aa17.35■□□□□ 0.37
CCDC149-201ENST00000324309 MAGI1Q96QZ7 1491 aaPredicted RBP17.35■□□□□ 0.37
CCDC149-201ENST00000324309 SYNJ2O15056 1496 aa17.34■□□□□ 0.37
CCDC149-201ENST00000324309 SNAPC4Q5SXM2 1469 aa17.33■□□□□ 0.36
CCDC149-201ENST00000324309 CUL7Q14999 1698 aa17.33■□□□□ 0.36
CCDC149-201ENST00000324309 CYB5RLQ6IPT4 315 aa17.32■□□□□ 0.36
CCDC149-201ENST00000324309 SYNJ1O43426 1573 aa17.31■□□□□ 0.36
CCDC149-201ENST00000324309 CANXP27824 592 aaKnown RBP17.29■□□□□ 0.36
CCDC149-201ENST00000324309 PRG4Q92954 1404 aaPredicted RBP17.29■□□□□ 0.36
CCDC149-201ENST00000324309 POGKQ9P215 609 aa17.27■□□□□ 0.35
CCDC149-201ENST00000324309 CASKIN1Q8WXD9 1431 aa17.26■□□□□ 0.35
CCDC149-201ENST00000324309 KIAA0586Q9BVV6 1533 aa17.26■□□□□ 0.35
CCDC149-201ENST00000324309 PLEKHH2Q8IVE3 1493 aa17.25■□□□□ 0.35
CCDC149-201ENST00000324309 GGT6Q6P531 493 aa17.25■□□□□ 0.35
CCDC149-201ENST00000324309 CFAP53Q96M91 514 aa17.24■□□□□ 0.35
CCDC149-201ENST00000324309 UACAQ9BZF9 1416 aa17.24■□□□□ 0.35
CCDC149-201ENST00000324309 WDR43Q15061 677 aaKnown RBP eCLIP17.24■□□□□ 0.35
CCDC149-201ENST00000324309 FYCO1Q9BQS8 1478 aa17.23■□□□□ 0.35
CCDC149-201ENST00000324309 RGL3Q3MIN7 710 aa17.23■□□□□ 0.35
CCDC149-201ENST00000324309 EID1Q9Y6B2 187 aa17.22■□□□□ 0.35
CCDC149-201ENST00000324309 MLECQ14165 292 aa17.22■□□□□ 0.35
CCDC149-201ENST00000324309 CARD11Q9BXL7 1154 aa17.22■□□□□ 0.35
CCDC149-201ENST00000324309 MYOM3Q5VTT5 1437 aa17.22■□□□□ 0.35
CCDC149-201ENST00000324309 RUSC2Q8N2Y8 1516 aa17.21■□□□□ 0.35
CCDC149-201ENST00000324309 HAP1P54257 671 aaPredicted RBP17.2■□□□□ 0.34
CCDC149-201ENST00000324309 DNAJC5BQ9UF47 199 aa17.2■□□□□ 0.34
CCDC149-201ENST00000324309 NUP155O75694 1391 aa17.2■□□□□ 0.34
CCDC149-201ENST00000324309 PRXQ9BXM0 1461 aa17.19■□□□□ 0.34
CCDC149-201ENST00000324309 KIF3BO15066 747 aa17.19■□□□□ 0.34
CCDC149-201ENST00000324309 PRDM2Q13029 1718 aa17.18■□□□□ 0.34
CCDC149-201ENST00000324309 EIF3AQ14152 1382 aaKnown RBP17.18■□□□□ 0.34
CCDC149-201ENST00000324309 FAM69CQ0P6D2 419 aa17.18■□□□□ 0.34
CCDC149-201ENST00000324309 HECW1Q76N89 1606 aa17.18■□□□□ 0.34
CCDC149-201ENST00000324309 TMC1Q8TDI8 760 aa17.17■□□□□ 0.34
CCDC149-201ENST00000324309 WASHC2CQ9Y4E1 1318 aa17.17■□□□□ 0.34
CCDC149-201ENST00000324309 KANK4Q5T7N3 995 aaPredicted RBP17.16■□□□□ 0.34
CCDC149-201ENST00000324309 HNRNPMP52272 730 aaKnown RBP eCLIP17.15■□□□□ 0.34
CCDC149-201ENST00000324309 SCAF1Q9H7N4 1312 aaKnown RBP17.15■□□□□ 0.34
CCDC149-201ENST00000324309 KNSTRNQ9Y448 316 aa17.15■□□□□ 0.34
CCDC149-201ENST00000324309 TMF1P82094 1093 aa17.14■□□□□ 0.33
CCDC149-201ENST00000324309 PKD2Q13563 968 aa17.14■□□□□ 0.33
CCDC149-201ENST00000324309 BIVM-ERCC5R4GMW8 1640 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms