RNA–Protein interactions for RNA: ENST00000323446.9

CPT1C-202, Transcript of carnitine palmitoyltransferase 1C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPT1C, Length 2,783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1C-202ENST00000323446 ARAP1Q96P48 1450 aa19.11■□□□□ 0.65
CPT1C-202ENST00000323446 PRXQ9BXM0 1461 aa19.11■□□□□ 0.65
CPT1C-202ENST00000323446 HMGXB3Q12766 1538 aa19.09■□□□□ 0.65
CPT1C-202ENST00000323446 KIF27Q86VH2 1401 aa19.06■□□□□ 0.64
CPT1C-202ENST00000323446 CFTRP13569 1480 aa19.05■□□□□ 0.64
CPT1C-202ENST00000323446 CCER2I3L3R5 266 aa19.04■□□□□ 0.64
CPT1C-202ENST00000323446 P3H3Q8IVL6 736 aa19.02■□□□□ 0.63
CPT1C-202ENST00000323446 CUX2O14529 1486 aa19.01■□□□□ 0.63
CPT1C-202ENST00000323446 PPP1R15AO75807 674 aaPredicted RBP19.01■□□□□ 0.63
CPT1C-202ENST00000323446 ERICH3Q5RHP9 1530 aa19■□□□□ 0.63
CPT1C-202ENST00000323446 IRX6P78412 446 aaPredicted RBP18.99■□□□□ 0.63
CPT1C-202ENST00000323446 ANP32CO43423 234 aa18.98■□□□□ 0.63
CPT1C-202ENST00000323446 SALL2Q9Y467 1007 aaPredicted RBP18.98■□□□□ 0.63
CPT1C-202ENST00000323446 ERICH6BQ5W0A0 696 aa18.97■□□□□ 0.63
CPT1C-202ENST00000323446 ATP1B4Q9UN42 357 aaPredicted RBP18.97■□□□□ 0.63
CPT1C-202ENST00000323446 RRBP1Q9P2E9 1410 aaKnown RBP18.96■□□□□ 0.63
CPT1C-202ENST00000323446 NBR1Q14596 966 aa18.96■□□□□ 0.63
CPT1C-202ENST00000323446 ARHGAP35Q9NRY4 1499 aa18.95■□□□□ 0.62
CPT1C-202ENST00000323446 MAPKBP1O60336 1514 aa18.95■□□□□ 0.62
CPT1C-202ENST00000323446 WDR97A6NE52 1622 aa18.94■□□□□ 0.62
CPT1C-202ENST00000323446 IGF1RP08069 1367 aa18.92■□□□□ 0.62
CPT1C-202ENST00000323446 NOP58Q9Y2X3 529 aaKnown RBP18.92■□□□□ 0.62
CPT1C-202ENST00000323446 CADPSQ9ULU8 1353 aa18.9■□□□□ 0.62
CPT1C-202ENST00000323446 FGD5Q6ZNL6 1462 aa18.89■□□□□ 0.61
CPT1C-202ENST00000323446 HIRIP3Q9BW71 556 aaPredicted RBP18.87■□□□□ 0.61
CPT1C-202ENST00000323446 RAB3GAP2Q9H2M9 1393 aa18.87■□□□□ 0.61
CPT1C-202ENST00000323446 CCNB3Q8WWL7 1395 aa18.87■□□□□ 0.61
CPT1C-202ENST00000323446 CARMIL1Q5VZK9 1371 aa18.86■□□□□ 0.61
CPT1C-202ENST00000323446 CCDC136Q96JN2 1154 aa18.85■□□□□ 0.61
CPT1C-202ENST00000323446 PPP4R2Q9NY27 417 aa18.85■□□□□ 0.61
CPT1C-202ENST00000323446 PAK3O75914 559 aaPredicted RBP18.84■□□□□ 0.61
CPT1C-202ENST00000323446 HNRNPUQ00839 825 aaKnown RBP eCLIP18.84■□□□□ 0.61
CPT1C-202ENST00000323446 RAD54L2Q9Y4B4 1467 aa18.83■□□□□ 0.6
CPT1C-202ENST00000323446 NESP48681 1621 aa18.83■□□□□ 0.6
CPT1C-202ENST00000323446 SIN3AQ96ST3 1273 aa18.81■□□□□ 0.6
CPT1C-202ENST00000323446 FAM50AQ14320 339 aaKnown RBP18.79■□□□□ 0.6
CPT1C-202ENST00000323446 IL27Q8NEV9 243 aa18.79■□□□□ 0.6
CPT1C-202ENST00000323446 RTL5Q5HYW3 569 aaPredicted RBP18.78■□□□□ 0.6
CPT1C-202ENST00000323446 FANCD2Q9BXW9 1451 aa18.77■□□□□ 0.6
CPT1C-202ENST00000323446 B4GALNT3Q6L9W6 998 aa18.76■□□□□ 0.59
CPT1C-202ENST00000323446 RTN4Q9NQC3 1192 aaKnown RBP18.75■□□□□ 0.59
CPT1C-202ENST00000323446 PRDM2Q13029 1718 aa18.74■□□□□ 0.59
CPT1C-202ENST00000323446 FHOD3Q2V2M9 1422 aa18.72■□□□□ 0.59
CPT1C-202ENST00000323446 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.72■□□□□ 0.59
CPT1C-202ENST00000323446 PHLDB1Q86UU1 1377 aa18.71■□□□□ 0.59
CPT1C-202ENST00000323446 SETD5Q9C0A6 1442 aa18.7■□□□□ 0.58
CPT1C-202ENST00000323446 UBE2Q2Q8WVN8 375 aa18.7■□□□□ 0.58
CPT1C-202ENST00000323446 TIMELESSQ9UNS1 1208 aa18.69■□□□□ 0.58
CPT1C-202ENST00000323446 TIAM1Q13009 1591 aa18.67■□□□□ 0.58
CPT1C-202ENST00000323446 ANP32AP39687 249 aaKnown RBP18.65■□□□□ 0.58
CPT1C-202ENST00000323446 IPO9Q96P70 1041 aaKnown RBP18.64■□□□□ 0.58
CPT1C-202ENST00000323446 POLA1P09884 1462 aaPredicted RBP18.64■□□□□ 0.57
CPT1C-202ENST00000323446 LRRC9Q6ZRR7 1453 aa18.63■□□□□ 0.57
CPT1C-202ENST00000323446 PCF11O94913 1555 aaKnown RBP18.63■□□□□ 0.57
CPT1C-202ENST00000323446 TDRD9Q8NDG6 1382 aaKnown RBP18.63■□□□□ 0.57
CPT1C-202ENST00000323446 TOPBP1Q92547 1522 aa18.62■□□□□ 0.57
CPT1C-202ENST00000323446 ZBTB47Q9UFB7 747 aaPredicted RBP18.62■□□□□ 0.57
CPT1C-202ENST00000323446 DNMBPQ6XZF7 1577 aa18.56■□□□□ 0.56
CPT1C-202ENST00000323446 WASHC2AQ641Q2 1341 aa18.56■□□□□ 0.56
CPT1C-202ENST00000323446 ARID3CA6NKF2 412 aa18.55■□□□□ 0.56
CPT1C-202ENST00000323446 LAMC3Q9Y6N6 1575 aa18.53■□□□□ 0.56
CPT1C-202ENST00000323446 FHAD1B1AJZ9 1412 aa18.53■□□□□ 0.56
CPT1C-202ENST00000323446 ABCA10Q8WWZ4 1543 aa18.53■□□□□ 0.56
CPT1C-202ENST00000323446 TONSLQ96HA7 1378 aa18.52■□□□□ 0.56
CPT1C-202ENST00000323446 URB2Q14146 1524 aaKnown RBP18.52■□□□□ 0.56
CPT1C-202ENST00000323446 CCDC184Q52MB2 194 aa18.48■□□□□ 0.55
CPT1C-202ENST00000323446 KIF21AQ7Z4S6 1674 aa18.48■□□□□ 0.55
CPT1C-202ENST00000323446 ZBED9Q6R2W3 1325 aa18.47■□□□□ 0.55
CPT1C-202ENST00000323446 C11orf95C9JLR9 678 aaPredicted RBP18.46■□□□□ 0.55
CPT1C-202ENST00000323446 FAM9BQ8IZU0 186 aa18.45■□□□□ 0.54
CPT1C-202ENST00000323446 CFAP43Q8NDM7 1665 aa18.45■□□□□ 0.54
CPT1C-202ENST00000323446 NEFMP07197 916 aa18.45■□□□□ 0.54
CPT1C-202ENST00000323446 MAP3K1Q13233 1512 aa18.44■□□□□ 0.54
CPT1C-202ENST00000323446 WASHC2CQ9Y4E1 1318 aa18.43■□□□□ 0.54
CPT1C-202ENST00000323446 USP35Q9P2H5 1018 aa18.42■□□□□ 0.54
CPT1C-202ENST00000323446 LAS1LQ9Y4W2 734 aaKnown RBP18.42■□□□□ 0.54
CPT1C-202ENST00000323446 MTUS2Q5JR59 1369 aa18.42■□□□□ 0.54
CPT1C-202ENST00000323446 PDS5BQ9NTI5 1447 aa18.42■□□□□ 0.54
CPT1C-202ENST00000323446 CASKIN1Q8WXD9 1431 aa18.41■□□□□ 0.54
CPT1C-202ENST00000323446 EIF5BO60841 1220 aaKnown RBP18.41■□□□□ 0.54
CPT1C-202ENST00000323446 FYCO1Q9BQS8 1478 aa18.4■□□□□ 0.54
CPT1C-202ENST00000323446 CHIC2Q9UKJ5 165 aa18.39■□□□□ 0.53
CPT1C-202ENST00000323446 GAPVD1Q14C86 1478 aa18.38■□□□□ 0.53
CPT1C-202ENST00000323446 NPM2Q86SE8 214 aaKnown RBP18.38■□□□□ 0.53
CPT1C-202ENST00000323446 MRS2Q9HD23 443 aa18.38■□□□□ 0.53
CPT1C-202ENST00000323446 CTTNBP2Q8WZ74 1663 aa18.38■□□□□ 0.53
CPT1C-202ENST00000323446 BRPF3Q9ULD4 1205 aa18.38■□□□□ 0.53
CPT1C-202ENST00000323446 PTPRKQ15262 1439 aa18.38■□□□□ 0.53
CPT1C-202ENST00000323446 AKNAQ7Z591 1439 aa18.38■□□□□ 0.53
CPT1C-202ENST00000323446 CNTLNQ9NXG0 1405 aa18.36■□□□□ 0.53
CPT1C-202ENST00000323446 CUL7Q14999 1698 aa18.36■□□□□ 0.53
CPT1C-202ENST00000323446 SNAPC4Q5SXM2 1469 aa18.35■□□□□ 0.53
CPT1C-202ENST00000323446 FGD6Q6ZV73 1430 aa18.35■□□□□ 0.53
CPT1C-202ENST00000323446 RRP7BPQ9NSQ0 103 aa18.34■□□□□ 0.53
CPT1C-202ENST00000323446 ERCC6Q03468 1493 aa18.34■□□□□ 0.53
CPT1C-202ENST00000323446 EFCAB5A4FU69 1503 aa18.34■□□□□ 0.53
CPT1C-202ENST00000323446 NCOA2Q15596 1464 aa18.34■□□□□ 0.53
CPT1C-202ENST00000323446 HSPA5P11021 654 aaKnown RBP18.33■□□□□ 0.53
CPT1C-202ENST00000323446 PRKRIP1Q9H875 184 aaPredicted RBP18.33■□□□□ 0.53
CPT1C-202ENST00000323446 FMN1Q68DA7 1419 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms