RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 CTTNBP2Q8WZ74 1663 aa19.79■□□□□ 0.76
PTPN6-201ENST00000318974 SYNJ2O15056 1496 aa19.79■□□□□ 0.76
PTPN6-201ENST00000318974 GRIN2AQ12879 1464 aa19.78■□□□□ 0.76
PTPN6-201ENST00000318974 ARHGAP35Q9NRY4 1499 aa19.78■□□□□ 0.76
PTPN6-201ENST00000318974 CHMP7Q8WUX9 453 aaPredicted RBP19.78■□□□□ 0.76
PTPN6-201ENST00000318974 VPS8Q8N3P4 1428 aa19.75■□□□□ 0.75
PTPN6-201ENST00000318974 ARAP1Q96P48 1450 aa19.75■□□□□ 0.75
PTPN6-201ENST00000318974 FBLN2P98095 1184 aa19.72■□□□□ 0.75
PTPN6-201ENST00000318974 EFCAB5A4FU69 1503 aa19.7■□□□□ 0.74
PTPN6-201ENST00000318974 KIAA0586Q9BVV6 1533 aa19.68■□□□□ 0.74
PTPN6-201ENST00000318974 IQGAP2Q13576 1575 aa19.67■□□□□ 0.74
PTPN6-201ENST00000318974 NUP160Q12769 1436 aa19.65■□□□□ 0.74
PTPN6-201ENST00000318974 P3H3Q8IVL6 736 aa19.64■□□□□ 0.74
PTPN6-201ENST00000318974 CEP170Q5SW79 1584 aa19.64■□□□□ 0.73
PTPN6-201ENST00000318974 SAMD9Q5K651 1589 aa19.62■□□□□ 0.73
PTPN6-201ENST00000318974 FHOD3Q2V2M9 1422 aa19.61■□□□□ 0.73
PTPN6-201ENST00000318974 UGGT2Q9NYU1 1516 aa19.59■□□□□ 0.73
PTPN6-201ENST00000318974 APLP2Q06481 763 aa19.59■□□□□ 0.73
PTPN6-201ENST00000318974 PPARGC1BQ86YN6 1023 aaKnown RBP19.58■□□□□ 0.73
PTPN6-201ENST00000318974 CHD1O14646 1710 aa19.55■□□□□ 0.72
PTPN6-201ENST00000318974 FMN1Q68DA7 1419 aa19.54■□□□□ 0.72
PTPN6-201ENST00000318974 JPH4Q96JJ6 628 aa19.51■□□□□ 0.71
PTPN6-201ENST00000318974 DISP1Q96F81 1524 aa19.49■□□□□ 0.71
PTPN6-201ENST00000318974 KIAA0556O60303 1618 aa19.48■□□□□ 0.71
PTPN6-201ENST00000318974 CASKIN1Q8WXD9 1431 aa19.47■□□□□ 0.71
PTPN6-201ENST00000318974 PCF11O94913 1555 aaKnown RBP19.47■□□□□ 0.71
PTPN6-201ENST00000318974 FYCO1Q9BQS8 1478 aa19.46■□□□□ 0.71
PTPN6-201ENST00000318974 TTBK1Q5TCY1 1321 aaPredicted RBP19.45■□□□□ 0.7
PTPN6-201ENST00000318974 CARMIL2Q6F5E8 1435 aa19.45■□□□□ 0.7
PTPN6-201ENST00000318974 ATP1B4Q9UN42 357 aaPredicted RBP19.44■□□□□ 0.7
PTPN6-201ENST00000318974 MAP3K1Q13233 1512 aa19.43■□□□□ 0.7
PTPN6-201ENST00000318974 ZEB1P37275 1124 aaPredicted RBP19.41■□□□□ 0.7
PTPN6-201ENST00000318974 KANK4Q5T7N3 995 aaPredicted RBP19.39■□□□□ 0.69
PTPN6-201ENST00000318974 TIAM1Q13009 1591 aa19.39■□□□□ 0.69
PTPN6-201ENST00000318974 PRG4Q92954 1404 aaPredicted RBP19.38■□□□□ 0.69
PTPN6-201ENST00000318974 CLASP1Q7Z460 1538 aa19.37■□□□□ 0.69
PTPN6-201ENST00000318974 SHROOM2Q13796 1616 aa19.36■□□□□ 0.69
PTPN6-201ENST00000318974 CFAP43Q8NDM7 1665 aa19.33■□□□□ 0.69
PTPN6-201ENST00000318974 HECW1Q76N89 1606 aa19.32■□□□□ 0.68
PTPN6-201ENST00000318974 LRRC9Q6ZRR7 1453 aa19.31■□□□□ 0.68
PTPN6-201ENST00000318974 CCDC18Q5T9S5 1454 aa19.29■□□□□ 0.68
PTPN6-201ENST00000318974 OSCARQ8IYS5 282 aa19.27■□□□□ 0.68
PTPN6-201ENST00000318974 RAPGEF6Q8TEU7 1601 aa19.27■□□□□ 0.68
PTPN6-201ENST00000318974 EPRSP07814 1512 aaKnown RBP19.26■□□□□ 0.67
PTPN6-201ENST00000318974 PTPRGP23470 1445 aa19.26■□□□□ 0.67
PTPN6-201ENST00000318974 LRRIQ1Q96JM4 1722 aa19.25■□□□□ 0.67
PTPN6-201ENST00000318974 PLB1Q6P1J6 1458 aa19.25■□□□□ 0.67
PTPN6-201ENST00000318974 NUP153P49790 1475 aaKnown RBP19.23■□□□□ 0.67
PTPN6-201ENST00000318974 MTUS2Q5JR59 1369 aa19.22■□□□□ 0.67
PTPN6-201ENST00000318974 ERCC6L2Q5T890 1561 aa19.22■□□□□ 0.67
PTPN6-201ENST00000318974 ABCA8O94911 1581 aa19.21■□□□□ 0.67
PTPN6-201ENST00000318974 CDK13Q14004 1512 aaKnown RBP19.2■□□□□ 0.66
PTPN6-201ENST00000318974 ARID3CA6NKF2 412 aa19.19■□□□□ 0.66
PTPN6-201ENST00000318974 EHBP1L1Q8N3D4 1523 aa19.18■□□□□ 0.66
PTPN6-201ENST00000318974 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.15■□□□□ 0.66
PTPN6-201ENST00000318974 HNRNPUL2Q1KMD3 747 aaKnown RBP19.15■□□□□ 0.66
PTPN6-201ENST00000318974 UACAQ9BZF9 1416 aa19.14■□□□□ 0.66
PTPN6-201ENST00000318974 MAGI3Q5TCQ9 1506 aa19.14■□□□□ 0.66
PTPN6-201ENST00000318974 RRBP1Q9P2E9 1410 aaKnown RBP19.14■□□□□ 0.65
PTPN6-201ENST00000318974 CDK11AQ9UQ88 783 aaPredicted RBP19.14■□□□□ 0.65
PTPN6-201ENST00000318974 PHLDB1Q86UU1 1377 aa19.13■□□□□ 0.65
PTPN6-201ENST00000318974 CCNB3Q8WWL7 1395 aa19.1■□□□□ 0.65
PTPN6-201ENST00000318974 ATP10BO94823 1461 aa19.1■□□□□ 0.65
PTPN6-201ENST00000318974 NCOA2Q15596 1464 aa19.1■□□□□ 0.65
PTPN6-201ENST00000318974 SUPT6HQ7KZ85 1726 aaKnown RBP19.09■□□□□ 0.65
PTPN6-201ENST00000318974 ABCC2Q92887 1545 aa19.07■□□□□ 0.64
PTPN6-201ENST00000318974 ARHGEF11O15085 1522 aa19.06■□□□□ 0.64
PTPN6-201ENST00000318974 TROQ12816 1431 aaPredicted RBP19.06■□□□□ 0.64
PTPN6-201ENST00000318974 UHRF1BP1LA0JNW5 1464 aa19.05■□□□□ 0.64
PTPN6-201ENST00000318974 PLEKHD1A6NEE1 506 aa19.04■□□□□ 0.64
PTPN6-201ENST00000318974 MYOM3Q5VTT5 1437 aa19.02■□□□□ 0.64
PTPN6-201ENST00000318974 FGD6Q6ZV73 1430 aa19.01■□□□□ 0.63
PTPN6-201ENST00000318974 CCER1Q8TC90 406 aaPredicted RBP18.99■□□□□ 0.63
PTPN6-201ENST00000318974 FAM50AQ14320 339 aaKnown RBP18.98■□□□□ 0.63
PTPN6-201ENST00000318974 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.97■□□□□ 0.63
PTPN6-201ENST00000318974 KDM5BQ9UGL1 1544 aa18.96■□□□□ 0.63
PTPN6-201ENST00000318974 ADCY10Q96PN6 1610 aa18.96■□□□□ 0.63
PTPN6-201ENST00000318974 MIA2Q96PC5 1412 aa18.93■□□□□ 0.62
PTPN6-201ENST00000318974 KIF14Q15058 1648 aa18.92■□□□□ 0.62
PTPN6-201ENST00000318974 ITGAEP38570 1179 aa18.92■□□□□ 0.62
PTPN6-201ENST00000318974 ZCCHC11Q5TAX3 1644 aaKnown RBP18.92■□□□□ 0.62
PTPN6-201ENST00000318974 PTPN23Q9H3S7 1636 aa18.9■□□□□ 0.62
PTPN6-201ENST00000318974 TCOF1Q13428 1488 aaKnown RBP18.89■□□□□ 0.61
PTPN6-201ENST00000318974 ABCC10Q5T3U5 1492 aa18.88■□□□□ 0.61
PTPN6-201ENST00000318974 GPATCH8Q9UKJ3 1502 aaKnown RBP18.87■□□□□ 0.61
PTPN6-201ENST00000318974 ITSN2Q9NZM3 1697 aa18.84■□□□□ 0.61
PTPN6-201ENST00000318974 CFDP1Q9UEE9 299 aaPredicted RBP18.84■□□□□ 0.61
PTPN6-201ENST00000318974 NPM1P06748 294 aaKnown RBP eCLIP18.83■□□□□ 0.6
PTPN6-201ENST00000318974 RIMBP3CA6NJZ7 1639 aa18.81■□□□□ 0.6
PTPN6-201ENST00000318974 RIMBP3BA6NNM3 1639 aa18.81■□□□□ 0.6
PTPN6-201ENST00000318974 RIMBP3Q9UFD9 1639 aa18.81■□□□□ 0.6
PTPN6-201ENST00000318974 KCNH8Q96L42 1107 aa18.81■□□□□ 0.6
PTPN6-201ENST00000318974 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.79■□□□□ 0.6
PTPN6-201ENST00000318974 WDR7Q9Y4E6 1490 aa18.79■□□□□ 0.6
PTPN6-201ENST00000318974 ZNF644Q9H582 1327 aaPredicted RBP18.78■□□□□ 0.6
PTPN6-201ENST00000318974 CYB5RLQ6IPT4 315 aa18.77■□□□□ 0.6
PTPN6-201ENST00000318974 CDC42BPAQ5VT25 1732 aa18.77■□□□□ 0.6
PTPN6-201ENST00000318974 PTPRKQ15262 1439 aa18.77■□□□□ 0.6
PTPN6-201ENST00000318974 ZNF777Q9ULD5 760 aaPredicted RBP18.77■□□□□ 0.59
PTPN6-201ENST00000318974 CAMSAP2Q08AD1 1489 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms