RNA–Protein interactions for RNA: ENST00000317501.7

NTRK3-201, Transcript of neurotrophic receptor tyrosine kinase 3, humanhuman

TSL 1 (best) BASIC

Gene NTRK3, Length 3,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK3-201ENST00000317501 DDX10Q13206 875 aaKnown RBP11.77□□□□□ -0.53
NTRK3-201ENST00000317501 ARHGAP35Q9NRY4 1499 aa11.77□□□□□ -0.53
NTRK3-201ENST00000317501 TIAM1Q13009 1591 aa11.77□□□□□ -0.53
NTRK3-201ENST00000317501 RANGAP1P46060 587 aaPredicted RBP11.75□□□□□ -0.53
NTRK3-201ENST00000317501 ANP32CO43423 234 aa11.73□□□□□ -0.53
NTRK3-201ENST00000317501 ERICH6BQ5W0A0 696 aa11.71□□□□□ -0.53
NTRK3-201ENST00000317501 ITGAEP38570 1179 aa11.71□□□□□ -0.54
NTRK3-201ENST00000317501 CFAP43Q8NDM7 1665 aa11.7□□□□□ -0.54
NTRK3-201ENST00000317501 KIF27Q86VH2 1401 aa11.7□□□□□ -0.54
NTRK3-201ENST00000317501 TRIM52Q96A61 297 aa11.69□□□□□ -0.54
NTRK3-201ENST00000317501 CDK11AQ9UQ88 783 aaPredicted RBP11.69□□□□□ -0.54
NTRK3-201ENST00000317501 LRRC9Q6ZRR7 1453 aa11.68□□□□□ -0.54
NTRK3-201ENST00000317501 CUX1P39880 1505 aa11.67□□□□□ -0.54
NTRK3-201ENST00000317501 ERICH6Q7L0X2 663 aa11.67□□□□□ -0.54
NTRK3-201ENST00000317501 SIN3AQ96ST3 1273 aa11.65□□□□□ -0.54
NTRK3-201ENST00000317501 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.65□□□□□ -0.55
NTRK3-201ENST00000317501 PHLDB1Q86UU1 1377 aa11.63□□□□□ -0.55
NTRK3-201ENST00000317501 PPP4R2Q9NY27 417 aa11.6□□□□□ -0.55
NTRK3-201ENST00000317501 FHAD1B1AJZ9 1412 aa11.59□□□□□ -0.55
NTRK3-201ENST00000317501 PRDM2Q13029 1718 aa11.58□□□□□ -0.56
NTRK3-201ENST00000317501 DEKP35659 375 aaKnown RBP11.57□□□□□ -0.56
NTRK3-201ENST00000317501 PCF11O94913 1555 aaKnown RBP11.57□□□□□ -0.56
NTRK3-201ENST00000317501 HMGXB3Q12766 1538 aa11.56□□□□□ -0.56
NTRK3-201ENST00000317501 HNRNPUQ00839 825 aaKnown RBP eCLIP11.56□□□□□ -0.56
NTRK3-201ENST00000317501 PABPN1Q86U42 306 aaKnown RBP eCLIP11.56□□□□□ -0.56
NTRK3-201ENST00000317501 TONSLQ96HA7 1378 aa11.56□□□□□ -0.56
NTRK3-201ENST00000317501 KDM5BQ9UGL1 1544 aa11.55□□□□□ -0.56
NTRK3-201ENST00000317501 HIRIP3Q9BW71 556 aaPredicted RBP11.55□□□□□ -0.56
NTRK3-201ENST00000317501 NCOA2Q15596 1464 aa11.54□□□□□ -0.56
NTRK3-201ENST00000317501 UACAQ9BZF9 1416 aa11.54□□□□□ -0.56
NTRK3-201ENST00000317501 PRKCSHP14314 528 aaPredicted RBP11.53□□□□□ -0.56
NTRK3-201ENST00000317501 FAM50AQ14320 339 aaKnown RBP11.53□□□□□ -0.56
NTRK3-201ENST00000317501 FYCO1Q9BQS8 1478 aa11.53□□□□□ -0.56
NTRK3-201ENST00000317501 AQRO60306 1485 aaKnown RBP eCLIP11.52□□□□□ -0.56
NTRK3-201ENST00000317501 CCDC18Q5T9S5 1454 aa11.52□□□□□ -0.56
NTRK3-201ENST00000317501 PTPN23Q9H3S7 1636 aa11.52□□□□□ -0.57
NTRK3-201ENST00000317501 IGF1RP08069 1367 aa11.52□□□□□ -0.57
NTRK3-201ENST00000317501 CFTRP13569 1480 aa11.51□□□□□ -0.57
NTRK3-201ENST00000317501 IRX6P78412 446 aaPredicted RBP11.51□□□□□ -0.57
NTRK3-201ENST00000317501 HFM1A2PYH4 1435 aa11.51□□□□□ -0.57
NTRK3-201ENST00000317501 NOP58Q9Y2X3 529 aaKnown RBP11.5□□□□□ -0.57
NTRK3-201ENST00000317501 EFCAB5A4FU69 1503 aa11.5□□□□□ -0.57
NTRK3-201ENST00000317501 NCAPD3P42695 1498 aa11.49□□□□□ -0.57
NTRK3-201ENST00000317501 CNTLNQ9NXG0 1405 aa11.48□□□□□ -0.57
NTRK3-201ENST00000317501 CASKIN1Q8WXD9 1431 aa11.48□□□□□ -0.57
NTRK3-201ENST00000317501 FGD5Q6ZNL6 1462 aa11.48□□□□□ -0.57
NTRK3-201ENST00000317501 FGD6Q6ZV73 1430 aa11.48□□□□□ -0.57
NTRK3-201ENST00000317501 CARMIL1Q5VZK9 1371 aa11.47□□□□□ -0.57
NTRK3-201ENST00000317501 ZBED9Q6R2W3 1325 aa11.47□□□□□ -0.57
NTRK3-201ENST00000317501 POLR1AO95602 1720 aaPredicted RBP11.47□□□□□ -0.57
NTRK3-201ENST00000317501 WASHC2AQ641Q2 1341 aa11.45□□□□□ -0.58
NTRK3-201ENST00000317501 HECW1Q76N89 1606 aa11.45□□□□□ -0.58
NTRK3-201ENST00000317501 ABCA5Q8WWZ7 1642 aa11.44□□□□□ -0.58
NTRK3-201ENST00000317501 NAIPQ13075 1403 aa11.43□□□□□ -0.58
NTRK3-201ENST00000317501 GCC2Q8IWJ2 1684 aa11.43□□□□□ -0.58
NTRK3-201ENST00000317501 B4GALNT3Q6L9W6 998 aa11.42□□□□□ -0.58
NTRK3-201ENST00000317501 CTTNBP2Q8WZ74 1663 aa11.42□□□□□ -0.58
NTRK3-201ENST00000317501 PTPRKQ15262 1439 aa11.42□□□□□ -0.58
NTRK3-201ENST00000317501 HSPA5P11021 654 aaKnown RBP11.41□□□□□ -0.58
NTRK3-201ENST00000317501 NCOA1Q15788 1441 aa11.41□□□□□ -0.58
NTRK3-201ENST00000317501 FMN1Q68DA7 1419 aa11.4□□□□□ -0.58
NTRK3-201ENST00000317501 PAK3O75914 559 aaPredicted RBP11.4□□□□□ -0.58
NTRK3-201ENST00000317501 SMG6Q86US8 1419 aaKnown RBP11.4□□□□□ -0.58
NTRK3-201ENST00000317501 IPO9Q96P70 1041 aaKnown RBP11.39□□□□□ -0.59
NTRK3-201ENST00000317501 PRKRIP1Q9H875 184 aaPredicted RBP11.39□□□□□ -0.59
NTRK3-201ENST00000317501 RNF123Q5XPI4 1314 aa11.39□□□□□ -0.59
NTRK3-201ENST00000317501 SNAPC4Q5SXM2 1469 aa11.38□□□□□ -0.59
NTRK3-201ENST00000317501 FHOD3Q2V2M9 1422 aa11.38□□□□□ -0.59
NTRK3-201ENST00000317501 EIF4G2P78344 907 aaKnown RBP eCLIP11.38□□□□□ -0.59
NTRK3-201ENST00000317501 CCDC7Q96M83 1385 aa11.38□□□□□ -0.59
NTRK3-201ENST00000317501 CCDC184Q52MB2 194 aa11.38□□□□□ -0.59
NTRK3-201ENST00000317501 THOC2Q8NI27 1593 aaKnown RBP11.38□□□□□ -0.59
NTRK3-201ENST00000317501 ANP32AP39687 249 aaKnown RBP11.37□□□□□ -0.59
NTRK3-201ENST00000317501 SUPT6HQ7KZ85 1726 aaKnown RBP11.37□□□□□ -0.59
NTRK3-201ENST00000317501 LRRIQ1Q96JM4 1722 aa11.37□□□□□ -0.59
NTRK3-201ENST00000317501 CC2D2AQ9P2K1 1620 aa11.37□□□□□ -0.59
NTRK3-201ENST00000317501 NBR1Q14596 966 aa11.37□□□□□ -0.59
NTRK3-201ENST00000317501 CUL7Q14999 1698 aa11.36□□□□□ -0.59
NTRK3-201ENST00000317501 MYOM3Q5VTT5 1437 aa11.36□□□□□ -0.59
NTRK3-201ENST00000317501 AKNAQ7Z591 1439 aa11.36□□□□□ -0.59
NTRK3-201ENST00000317501 DENND4BO75064 1496 aaPredicted RBP11.36□□□□□ -0.59
NTRK3-201ENST00000317501 RTL5Q5HYW3 569 aaPredicted RBP11.35□□□□□ -0.59
NTRK3-201ENST00000317501 MRS2Q9HD23 443 aa11.34□□□□□ -0.59
NTRK3-201ENST00000317501 EHBP1L1Q8N3D4 1523 aa11.34□□□□□ -0.59
NTRK3-201ENST00000317501 ARHGEF11O15085 1522 aa11.34□□□□□ -0.59
NTRK3-201ENST00000317501 ZBTB47Q9UFB7 747 aaPredicted RBP11.33□□□□□ -0.6
NTRK3-201ENST00000317501 FAM9BQ8IZU0 186 aa11.33□□□□□ -0.6
NTRK3-201ENST00000317501 TCOF1Q13428 1488 aaKnown RBP11.33□□□□□ -0.6
NTRK3-201ENST00000317501 SAMD9Q5K651 1589 aa11.33□□□□□ -0.6
NTRK3-201ENST00000317501 KIF21AQ7Z4S6 1674 aa11.32□□□□□ -0.6
NTRK3-201ENST00000317501 UGGT2Q9NYU1 1516 aa11.32□□□□□ -0.6
NTRK3-201ENST00000317501 MTUS2Q5JR59 1369 aa11.32□□□□□ -0.6
NTRK3-201ENST00000317501 ANO8Q9HCE9 1232 aaPredicted RBP11.31□□□□□ -0.6
NTRK3-201ENST00000317501 NUDCQ9Y266 331 aa11.31□□□□□ -0.6
NTRK3-201ENST00000317501 GRIN2BQ13224 1484 aa11.3□□□□□ -0.6
NTRK3-201ENST00000317501 SPATA31E1Q6ZUB1 1445 aa11.3□□□□□ -0.6
NTRK3-201ENST00000317501 USP35Q9P2H5 1018 aa11.3□□□□□ -0.6
NTRK3-201ENST00000317501 P3H3Q8IVL6 736 aa11.3□□□□□ -0.6
NTRK3-201ENST00000317501 ATP1B4Q9UN42 357 aaPredicted RBP11.3□□□□□ -0.6
NTRK3-201ENST00000317501 C11orf95C9JLR9 678 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms