RNA–Protein interactions for RNA: ENST00000317419.7

RABGAP1-201, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 3

Gene RABGAP1, Length 2,186 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-201ENST00000317419 CTTNBP2Q8WZ74 1663 aa30.91■■■□□ 2.54
RABGAP1-201ENST00000317419 IQGAP2Q13576 1575 aa30.83■■■□□ 2.53
RABGAP1-201ENST00000317419 LOC105371045A0A1W2PR82 267 aa30.83■■■□□ 2.53
RABGAP1-201ENST00000317419 TNIKQ9UKE5 1360 aa30.82■■■□□ 2.52
RABGAP1-201ENST00000317419 UBTFP17480 764 aaKnown RBP30.82■■■□□ 2.52
RABGAP1-201ENST00000317419 EHMT2Q96KQ7 1210 aa30.82■■■□□ 2.52
RABGAP1-201ENST00000317419 SHROOM2Q13796 1616 aa30.79■■■□□ 2.52
RABGAP1-201ENST00000317419 UGGT2Q9NYU1 1516 aa30.74■■■□□ 2.51
RABGAP1-201ENST00000317419 JPH4Q96JJ6 628 aa30.72■■■□□ 2.51
RABGAP1-201ENST00000317419 DISP1Q96F81 1524 aa30.61■■■□□ 2.49
RABGAP1-201ENST00000317419 SAMD9Q5K651 1589 aa30.6■■■□□ 2.49
RABGAP1-201ENST00000317419 PRG4Q92954 1404 aaPredicted RBP30.6■■■□□ 2.49
RABGAP1-201ENST00000317419 EFCAB5A4FU69 1503 aa30.56■■■□□ 2.48
RABGAP1-201ENST00000317419 ERCC6L2Q5T890 1561 aa30.55■■■□□ 2.48
RABGAP1-201ENST00000317419 KIAA0556O60303 1618 aa30.55■■■□□ 2.48
RABGAP1-201ENST00000317419 CEP162Q5TB80 1403 aa30.53■■■□□ 2.48
RABGAP1-201ENST00000317419 CARMIL2Q6F5E8 1435 aa30.53■■■□□ 2.48
RABGAP1-201ENST00000317419 ARHGAP35Q9NRY4 1499 aa30.51■■■□□ 2.48
RABGAP1-201ENST00000317419 CLIP1P30622 1438 aa30.5■■■□□ 2.47
RABGAP1-201ENST00000317419 ARHGEF11O15085 1522 aa30.49■■■□□ 2.47
RABGAP1-201ENST00000317419 RANGAP1P46060 587 aaPredicted RBP30.44■■■□□ 2.46
RABGAP1-201ENST00000317419 DNAJC5Q9H3Z4 198 aa30.44■■■□□ 2.46
RABGAP1-201ENST00000317419 RIMBP3CA6NJZ7 1639 aa30.43■■■□□ 2.46
RABGAP1-201ENST00000317419 RIMBP3BA6NNM3 1639 aa30.43■■■□□ 2.46
RABGAP1-201ENST00000317419 RIMBP3Q9UFD9 1639 aa30.43■■■□□ 2.46
RABGAP1-201ENST00000317419 FHOD3Q2V2M9 1422 aa30.37■■■□□ 2.45
RABGAP1-201ENST00000317419 ARAP1Q96P48 1450 aa30.37■■■□□ 2.45
RABGAP1-201ENST00000317419 P3H3Q8IVL6 736 aa30.35■■■□□ 2.45
RABGAP1-201ENST00000317419 PTPRGP23470 1445 aa30.32■■■□□ 2.44
RABGAP1-201ENST00000317419 FMN1Q68DA7 1419 aa30.24■■■□□ 2.43
RABGAP1-201ENST00000317419 ABCA8O94911 1581 aa30.21■■■□□ 2.43
RABGAP1-201ENST00000317419 UACAQ9BZF9 1416 aa30.16■■■□□ 2.42
RABGAP1-201ENST00000317419 UHRF1BP1LA0JNW5 1464 aa30.16■■■□□ 2.42
RABGAP1-201ENST00000317419 PLB1Q6P1J6 1458 aa30.16■■■□□ 2.42
RABGAP1-201ENST00000317419 VPS8Q8N3P4 1428 aa30.14■■■□□ 2.42
RABGAP1-201ENST00000317419 RAPGEF6Q8TEU7 1601 aa30.13■■■□□ 2.41
RABGAP1-201ENST00000317419 TTBK1Q5TCY1 1321 aaPredicted RBP30.12■■■□□ 2.41
RABGAP1-201ENST00000317419 ABCC2Q92887 1545 aa30.11■■■□□ 2.41
RABGAP1-201ENST00000317419 CASKIN1Q8WXD9 1431 aa30.11■■■□□ 2.41
RABGAP1-201ENST00000317419 CYB5RLQ6IPT4 315 aa30.1■■■□□ 2.41
RABGAP1-201ENST00000317419 PCF11O94913 1555 aaKnown RBP30.08■■■□□ 2.41
RABGAP1-201ENST00000317419 ADCY10Q96PN6 1610 aa30.08■■■□□ 2.41
RABGAP1-201ENST00000317419 FYCO1Q9BQS8 1478 aa30.06■■■□□ 2.4
RABGAP1-201ENST00000317419 NUP153P49790 1475 aaKnown RBP30.04■■■□□ 2.4
RABGAP1-201ENST00000317419 HECW1Q76N89 1606 aa30.03■■■□□ 2.4
RABGAP1-201ENST00000317419 KDM5BQ9UGL1 1544 aa29.99■■■□□ 2.39
RABGAP1-201ENST00000317419 ATP10BO94823 1461 aa29.94■■■□□ 2.38
RABGAP1-201ENST00000317419 LRRIQ1Q96JM4 1722 aa29.94■■■□□ 2.38
RABGAP1-201ENST00000317419 EPRSP07814 1512 aaKnown RBP29.93■■■□□ 2.38
RABGAP1-201ENST00000317419 CCDC18Q5T9S5 1454 aa29.9■■■□□ 2.38
RABGAP1-201ENST00000317419 ZCCHC11Q5TAX3 1644 aaKnown RBP29.89■■■□□ 2.38
RABGAP1-201ENST00000317419 MAP3K1Q13233 1512 aa29.86■■■□□ 2.37
RABGAP1-201ENST00000317419 CDK13Q14004 1512 aaKnown RBP29.86■■■□□ 2.37
RABGAP1-201ENST00000317419 ATP1B4Q9UN42 357 aaPredicted RBP29.84■■■□□ 2.37
RABGAP1-201ENST00000317419 CFAP43Q8NDM7 1665 aa29.81■■■□□ 2.36
RABGAP1-201ENST00000317419 NPM1P06748 294 aaKnown RBP eCLIP29.8■■■□□ 2.36
RABGAP1-201ENST00000317419 TIAM1Q13009 1591 aa29.8■■■□□ 2.36
RABGAP1-201ENST00000317419 MAPKBP1O60336 1514 aa29.79■■■□□ 2.36
RABGAP1-201ENST00000317419 ARID3CA6NKF2 412 aa29.78■■■□□ 2.36
RABGAP1-201ENST00000317419 ASXL2Q76L83 1435 aa29.72■■■□□ 2.35
RABGAP1-201ENST00000317419 MAGI3Q5TCQ9 1506 aa29.72■■■□□ 2.35
RABGAP1-201ENST00000317419 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.69■■■□□ 2.34
RABGAP1-201ENST00000317419 HNRNPUL2Q1KMD3 747 aaKnown RBP29.69■■■□□ 2.34
RABGAP1-201ENST00000317419 CDK11AQ9UQ88 783 aaPredicted RBP29.69■■■□□ 2.34
RABGAP1-201ENST00000317419 WDR7Q9Y4E6 1490 aa29.68■■■□□ 2.34
RABGAP1-201ENST00000317419 PLEKHD1A6NEE1 506 aa29.66■■■□□ 2.34
RABGAP1-201ENST00000317419 TROQ12816 1431 aaPredicted RBP29.66■■■□□ 2.34
RABGAP1-201ENST00000317419 LRRC9Q6ZRR7 1453 aa29.66■■■□□ 2.34
RABGAP1-201ENST00000317419 APLP2Q06481 763 aa29.66■■■□□ 2.34
RABGAP1-201ENST00000317419 EHBP1L1Q8N3D4 1523 aa29.63■■■□□ 2.33
RABGAP1-201ENST00000317419 KANK4Q5T7N3 995 aaPredicted RBP29.62■■■□□ 2.33
RABGAP1-201ENST00000317419 MTUS2Q5JR59 1369 aa29.59■■■□□ 2.33
RABGAP1-201ENST00000317419 ABCC10Q5T3U5 1492 aa29.54■■■□□ 2.32
RABGAP1-201ENST00000317419 GLI2P10070 1586 aa29.53■■■□□ 2.32
RABGAP1-201ENST00000317419 KIF14Q15058 1648 aa29.52■■■□□ 2.32
RABGAP1-201ENST00000317419 DIP2BQ9P265 1576 aa29.52■■■□□ 2.32
RABGAP1-201ENST00000317419 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.48■■■□□ 2.31
RABGAP1-201ENST00000317419 SUPT6HQ7KZ85 1726 aaKnown RBP29.48■■■□□ 2.31
RABGAP1-201ENST00000317419 KCNH8Q96L42 1107 aa29.47■■■□□ 2.31
RABGAP1-201ENST00000317419 ABCA9Q8IUA7 1624 aa29.47■■■□□ 2.31
RABGAP1-201ENST00000317419 NCOA2Q15596 1464 aa29.45■■■□□ 2.3
RABGAP1-201ENST00000317419 TTC37Q6PGP7 1564 aa29.43■■■□□ 2.3
RABGAP1-201ENST00000317419 KIF13AQ9H1H9 1805 aa29.43■■■□□ 2.3
RABGAP1-201ENST00000317419 MAP3K4Q9Y6R4 1608 aa29.39■■■□□ 2.3
RABGAP1-201ENST00000317419 FAM69CQ0P6D2 419 aa29.37■■■□□ 2.29
RABGAP1-201ENST00000317419 PPARGC1BQ86YN6 1023 aaKnown RBP29.35■■■□□ 2.29
RABGAP1-201ENST00000317419 GPATCH8Q9UKJ3 1502 aaKnown RBP29.34■■■□□ 2.29
RABGAP1-201ENST00000317419 ARAP3Q8WWN8 1544 aa29.33■■■□□ 2.29
RABGAP1-201ENST00000317419 PLCH2O75038 1416 aa29.32■■■□□ 2.28
RABGAP1-201ENST00000317419 CDC42BPAQ5VT25 1732 aa29.32■■■□□ 2.28
RABGAP1-201ENST00000317419 PHLDB1Q86UU1 1377 aa29.31■■■□□ 2.28
RABGAP1-201ENST00000317419 CD109Q6YHK3 1445 aa29.31■■■□□ 2.28
RABGAP1-201ENST00000317419 CCNB3Q8WWL7 1395 aa29.31■■■□□ 2.28
RABGAP1-201ENST00000317419 MYO5CQ9NQX4 1742 aa29.3■■■□□ 2.28
RABGAP1-201ENST00000317419 PREX2Q70Z35 1606 aa29.3■■■□□ 2.28
RABGAP1-201ENST00000317419 MYOM3Q5VTT5 1437 aa29.28■■■□□ 2.28
RABGAP1-201ENST00000317419 ITSN2Q9NZM3 1697 aa29.27■■■□□ 2.28
RABGAP1-201ENST00000317419 CDC42BPBQ9Y5S2 1711 aa29.26■■■□□ 2.28
RABGAP1-201ENST00000317419 PPRC1Q5VV67 1664 aaKnown RBP29.25■■■□□ 2.27
RABGAP1-201ENST00000317419 MIA2Q96PC5 1412 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms