RNA–Protein interactions for RNA: ENST00000314852.2

IMP3-201, Transcript of IMP3, U3 small nucleolar ribonucleoprotein, humanhuman

APPRIS P1 TSL 2 BASIC

Gene IMP3, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP3-201ENST00000314852 TOPBP1Q92547 1522 aa27.24■■□□□ 1.95
IMP3-201ENST00000314852 CARMIL1Q5VZK9 1371 aa27.21■■□□□ 1.95
IMP3-201ENST00000314852 MRC2Q9UBG0 1479 aa27.19■■□□□ 1.94
IMP3-201ENST00000314852 FGD5Q6ZNL6 1462 aa27.16■■□□□ 1.94
IMP3-201ENST00000314852 TIAM1Q13009 1591 aa27.15■■□□□ 1.94
IMP3-201ENST00000314852 FHAD1B1AJZ9 1412 aa27.12■■□□□ 1.93
IMP3-201ENST00000314852 POLA1P09884 1462 aaPredicted RBP27.09■■□□□ 1.93
IMP3-201ENST00000314852 THOC2Q8NI27 1593 aaKnown RBP27.08■■□□□ 1.93
IMP3-201ENST00000314852 WDR62O43379 1518 aa27.08■■□□□ 1.93
IMP3-201ENST00000314852 LRRC9Q6ZRR7 1453 aa27.04■■□□□ 1.92
IMP3-201ENST00000314852 YTHDC1Q96MU7 727 aaKnown RBP27■■□□□ 1.91
IMP3-201ENST00000314852 RAD54L2Q9Y4B4 1467 aa26.98■■□□□ 1.91
IMP3-201ENST00000314852 ABCA10Q8WWZ4 1543 aa26.98■■□□□ 1.91
IMP3-201ENST00000314852 CFAP43Q8NDM7 1665 aa26.97■■□□□ 1.91
IMP3-201ENST00000314852 EFCAB5A4FU69 1503 aa26.96■■□□□ 1.91
IMP3-201ENST00000314852 SETD5Q9C0A6 1442 aa26.96■■□□□ 1.91
IMP3-201ENST00000314852 RAB3GAP2Q9H2M9 1393 aa26.95■■□□□ 1.9
IMP3-201ENST00000314852 AQRO60306 1485 aaKnown RBP eCLIP26.94■■□□□ 1.9
IMP3-201ENST00000314852 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.93■■□□□ 1.9
IMP3-201ENST00000314852 CUL7Q14999 1698 aa26.91■■□□□ 1.9
IMP3-201ENST00000314852 FYCO1Q9BQS8 1478 aa26.89■■□□□ 1.89
IMP3-201ENST00000314852 TIMELESSQ9UNS1 1208 aa26.89■■□□□ 1.89
IMP3-201ENST00000314852 TARBP1Q13395 1621 aaKnown RBP26.87■■□□□ 1.89
IMP3-201ENST00000314852 MAPKBP1O60336 1514 aa26.86■■□□□ 1.89
IMP3-201ENST00000314852 PHLDB1Q86UU1 1377 aa26.86■■□□□ 1.89
IMP3-201ENST00000314852 WDR97A6NE52 1622 aa26.85■■□□□ 1.89
IMP3-201ENST00000314852 CASKIN1Q8WXD9 1431 aa26.85■■□□□ 1.89
IMP3-201ENST00000314852 PCF11O94913 1555 aaKnown RBP26.84■■□□□ 1.89
IMP3-201ENST00000314852 ITGAEP38570 1179 aa26.8■■□□□ 1.88
IMP3-201ENST00000314852 IFT140Q96RY7 1462 aa26.8■■□□□ 1.88
IMP3-201ENST00000314852 CTTNBP2Q8WZ74 1663 aa26.77■■□□□ 1.88
IMP3-201ENST00000314852 FMN1Q68DA7 1419 aa26.76■■□□□ 1.88
IMP3-201ENST00000314852 TDRD9Q8NDG6 1382 aaKnown RBP26.76■■□□□ 1.87
IMP3-201ENST00000314852 ABCA5Q8WWZ7 1642 aa26.72■■□□□ 1.87
IMP3-201ENST00000314852 FHOD3Q2V2M9 1422 aa26.71■■□□□ 1.87
IMP3-201ENST00000314852 ZNF608Q9ULD9 1512 aaPredicted RBP26.69■■□□□ 1.86
IMP3-201ENST00000314852 FAM50AQ14320 339 aaKnown RBP26.69■■□□□ 1.86
IMP3-201ENST00000314852 GAPVD1Q14C86 1478 aa26.68■■□□□ 1.86
IMP3-201ENST00000314852 MYT1Q01538 1121 aa26.66■■□□□ 1.86
IMP3-201ENST00000314852 P3H3Q8IVL6 736 aa26.63■■□□□ 1.85
IMP3-201ENST00000314852 SNAPC4Q5SXM2 1469 aa26.61■■□□□ 1.85
IMP3-201ENST00000314852 SAMD9Q5K651 1589 aa26.6■■□□□ 1.85
IMP3-201ENST00000314852 FGD6Q6ZV73 1430 aa26.6■■□□□ 1.85
IMP3-201ENST00000314852 EIF4G3O43432 1585 aaKnown RBP26.57■■□□□ 1.84
IMP3-201ENST00000314852 ATP1B4Q9UN42 357 aaPredicted RBP26.57■■□□□ 1.84
IMP3-201ENST00000314852 PBRM1Q86U86 1689 aa26.54■■□□□ 1.84
IMP3-201ENST00000314852 GRIN2BQ13224 1484 aa26.52■■□□□ 1.84
IMP3-201ENST00000314852 PPP1R15AO75807 674 aaPredicted RBP26.52■■□□□ 1.84
IMP3-201ENST00000314852 MTUS2Q5JR59 1369 aa26.51■■□□□ 1.83
IMP3-201ENST00000314852 HFM1A2PYH4 1435 aa26.5■■□□□ 1.83
IMP3-201ENST00000314852 SIN3AQ96ST3 1273 aa26.49■■□□□ 1.83
IMP3-201ENST00000314852 UACAQ9BZF9 1416 aa26.46■■□□□ 1.83
IMP3-201ENST00000314852 MYOM3Q5VTT5 1437 aa26.44■■□□□ 1.82
IMP3-201ENST00000314852 EHBP1L1Q8N3D4 1523 aa26.44■■□□□ 1.82
IMP3-201ENST00000314852 SUPT16HQ9Y5B9 1047 aaKnown RBP26.44■■□□□ 1.82
IMP3-201ENST00000314852 CCDC18Q5T9S5 1454 aa26.42■■□□□ 1.82
IMP3-201ENST00000314852 SUPT6HQ7KZ85 1726 aaKnown RBP26.42■■□□□ 1.82
IMP3-201ENST00000314852 NCOA2Q15596 1464 aa26.41■■□□□ 1.82
IMP3-201ENST00000314852 PTPN23Q9H3S7 1636 aa26.4■■□□□ 1.82
IMP3-201ENST00000314852 ADAMTS12P58397 1594 aa26.39■■□□□ 1.82
IMP3-201ENST00000314852 CCER2I3L3R5 266 aa26.38■■□□□ 1.81
IMP3-201ENST00000314852 ARHGEF11O15085 1522 aa26.37■■□□□ 1.81
IMP3-201ENST00000314852 LRRIQ1Q96JM4 1722 aa26.35■■□□□ 1.81
IMP3-201ENST00000314852 TONSLQ96HA7 1378 aa26.35■■□□□ 1.81
IMP3-201ENST00000314852 MAGI1Q96QZ7 1491 aaPredicted RBP26.35■■□□□ 1.81
IMP3-201ENST00000314852 DDX10Q13206 875 aaKnown RBP26.34■■□□□ 1.81
IMP3-201ENST00000314852 NAIPQ13075 1403 aa26.34■■□□□ 1.81
IMP3-201ENST00000314852 PTPRKQ15262 1439 aa26.34■■□□□ 1.81
IMP3-201ENST00000314852 UGGT2Q9NYU1 1516 aa26.34■■□□□ 1.81
IMP3-201ENST00000314852 TCOF1Q13428 1488 aaKnown RBP26.31■■□□□ 1.8
IMP3-201ENST00000314852 AKNAQ7Z591 1439 aa26.3■■□□□ 1.8
IMP3-201ENST00000314852 HECW1Q76N89 1606 aa26.26■■□□□ 1.79
IMP3-201ENST00000314852 SYNJ2O15056 1496 aa26.25■■□□□ 1.79
IMP3-201ENST00000314852 ANP32CO43423 234 aa26.24■■□□□ 1.79
IMP3-201ENST00000314852 MIA2Q96PC5 1412 aa26.23■■□□□ 1.79
IMP3-201ENST00000314852 KCNH8Q96L42 1107 aa26.21■■□□□ 1.79
IMP3-201ENST00000314852 GRIN2AQ12879 1464 aa26.21■■□□□ 1.79
IMP3-201ENST00000314852 IQGAP2Q13576 1575 aa26.19■■□□□ 1.78
IMP3-201ENST00000314852 GCC2Q8IWJ2 1684 aa26.19■■□□□ 1.78
IMP3-201ENST00000314852 CHMP7Q8WUX9 453 aaPredicted RBP26.19■■□□□ 1.78
IMP3-201ENST00000314852 MAGI3Q5TCQ9 1506 aa26.16■■□□□ 1.78
IMP3-201ENST00000314852 FBLN2P98095 1184 aa26.15■■□□□ 1.78
IMP3-201ENST00000314852 EPRSP07814 1512 aaKnown RBP26.15■■□□□ 1.78
IMP3-201ENST00000314852 KDM5BQ9UGL1 1544 aa26.12■■□□□ 1.77
IMP3-201ENST00000314852 CHD1O14646 1710 aa26.06■■□□□ 1.76
IMP3-201ENST00000314852 CEP170Q5SW79 1584 aa26.06■■□□□ 1.76
IMP3-201ENST00000314852 NUP160Q12769 1436 aa26.05■■□□□ 1.76
IMP3-201ENST00000314852 ROCK1Q13464 1354 aa26.04■■□□□ 1.76
IMP3-201ENST00000314852 HIRIP3Q9BW71 556 aaPredicted RBP26.02■■□□□ 1.76
IMP3-201ENST00000314852 KIAA0586Q9BVV6 1533 aa26.02■■□□□ 1.76
IMP3-201ENST00000314852 NEFLP07196 543 aa26■■□□□ 1.75
IMP3-201ENST00000314852 TSHZ2Q9NRE2 1034 aa26■■□□□ 1.75
IMP3-201ENST00000314852 RRP7BPQ9NSQ0 103 aa25.99■■□□□ 1.75
IMP3-201ENST00000314852 DENND4BO75064 1496 aaPredicted RBP25.99■■□□□ 1.75
IMP3-201ENST00000314852 MPHOSPH9Q99550 1183 aa25.96■■□□□ 1.75
IMP3-201ENST00000314852 CDK13Q14004 1512 aaKnown RBP25.94■■□□□ 1.74
IMP3-201ENST00000314852 FKBP8Q14318 412 aa25.94■■□□□ 1.74
IMP3-201ENST00000314852 TRIM52Q96A61 297 aa25.94■■□□□ 1.74
IMP3-201ENST00000314852 EIF4G2P78344 907 aaKnown RBP eCLIP25.92■■□□□ 1.74
IMP3-201ENST00000314852 CHIC2Q9UKJ5 165 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms