RNA–Protein interactions for RNA: ENST00000314742.12

LINS1-201, Transcript of lines homolog 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LINS1, Length 4,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-201ENST00000314742 BCL11AQ9H165 835 aa6.79□□□□□ -1.32
LINS1-201ENST00000314742 CUX1P39880 1505 aa6.78□□□□□ -1.32
LINS1-201ENST00000314742 PPP4R3CPQ6ZMV5 832 aa6.78□□□□□ -1.32
LINS1-201ENST00000314742 CHMP4AQ9BY43 222 aa6.77□□□□□ -1.33
LINS1-201ENST00000314742 FOXD4L1Q9NU39 408 aa6.76□□□□□ -1.33
LINS1-201ENST00000314742 CC2D2AQ9P2K1 1620 aa6.75□□□□□ -1.33
LINS1-201ENST00000314742 HSP90B1P14625 803 aaKnown RBP6.75□□□□□ -1.33
LINS1-201ENST00000314742 NCAPD3P42695 1498 aa6.74□□□□□ -1.33
LINS1-201ENST00000314742 PDE4CQ08493 712 aa6.74□□□□□ -1.33
LINS1-201ENST00000314742 KIF21BO75037 1637 aa6.73□□□□□ -1.33
LINS1-201ENST00000314742 DNAJC5BQ9UF47 199 aa6.73□□□□□ -1.33
LINS1-201ENST00000314742 HRCP23327 699 aa6.71□□□□□ -1.33
LINS1-201ENST00000314742 DHX37Q8IY37 1157 aaKnown RBP6.7□□□□□ -1.34
LINS1-201ENST00000314742 TSHZ2Q9NRE2 1034 aa6.7□□□□□ -1.34
LINS1-201ENST00000314742 KIF21AQ7Z4S6 1674 aa6.69□□□□□ -1.34
LINS1-201ENST00000314742 CFTRP13569 1480 aa6.69□□□□□ -1.34
LINS1-201ENST00000314742 BAZ1BQ9UIG0 1483 aaKnown RBP6.68□□□□□ -1.34
LINS1-201ENST00000314742 BRD2P25440 801 aaKnown RBP6.68□□□□□ -1.34
LINS1-201ENST00000314742 USP35Q9P2H5 1018 aa6.67□□□□□ -1.34
LINS1-201ENST00000314742 SENP3Q9H4L4 574 aaPredicted RBP6.67□□□□□ -1.34
LINS1-201ENST00000314742 UBE2Q2Q8WVN8 375 aa6.66□□□□□ -1.34
LINS1-201ENST00000314742 RAPGEF2Q9Y4G8 1499 aa6.66□□□□□ -1.34
LINS1-201ENST00000314742 PPARGC1BQ86YN6 1023 aaKnown RBP6.65□□□□□ -1.35
LINS1-201ENST00000314742 SPRYD3Q8NCJ5 442 aa6.65□□□□□ -1.35
LINS1-201ENST00000314742 WRNQ14191 1432 aaPredicted RBP eCLIP6.64□□□□□ -1.351e-6■■■■■ 58.5
LINS1-201ENST00000314742 ARID4BQ4LE39 1312 aaPredicted RBP6.64□□□□□ -1.35
LINS1-201ENST00000314742 NESP48681 1621 aa6.63□□□□□ -1.35
LINS1-201ENST00000314742 PRXQ9BXM0 1461 aa6.63□□□□□ -1.35
LINS1-201ENST00000314742 A0A0U1RQG5 324 aaPredicted RBP6.63□□□□□ -1.35
LINS1-201ENST00000314742 NEUROD2Q15784 382 aa6.62□□□□□ -1.35
LINS1-201ENST00000314742 ARAP1Q96P48 1450 aa6.62□□□□□ -1.35
LINS1-201ENST00000314742 RBM25P49756 843 aaKnown RBP6.62□□□□□ -1.35
LINS1-201ENST00000314742 TAF7LQ5H9L4 462 aa6.62□□□□□ -1.35
LINS1-201ENST00000314742 RAD21O60216 631 aa6.61□□□□□ -1.35
LINS1-201ENST00000314742 TARBP1Q13395 1621 aaKnown RBP6.61□□□□□ -1.35
LINS1-201ENST00000314742 ABCA5Q8WWZ7 1642 aa6.6□□□□□ -1.35
LINS1-201ENST00000314742 AEBP1Q8IUX7 1158 aa6.59□□□□□ -1.35
LINS1-201ENST00000314742 CEP162Q5TB80 1403 aa6.58□□□□□ -1.36
LINS1-201ENST00000314742 BBXQ8WY36 941 aaPredicted RBP6.58□□□□□ -1.36
LINS1-201ENST00000314742 KCTD17Q8N5Z5 321 aa6.58□□□□□ -1.36
LINS1-201ENST00000314742 ZNF526Q8TF50 670 aaPredicted RBP6.58□□□□□ -1.36
LINS1-201ENST00000314742 IGSF3O75054 1194 aa6.58□□□□□ -1.36
LINS1-201ENST00000314742 CNKSR2Q8WXI2 1034 aa6.57□□□□□ -1.36
LINS1-201ENST00000314742 URB2Q14146 1524 aaKnown RBP6.57□□□□□ -1.36
LINS1-201ENST00000314742 PPM1GO15355 546 aaPredicted RBP6.56□□□□□ -1.36
LINS1-201ENST00000314742 ERICH3Q5RHP9 1530 aa6.56□□□□□ -1.36
LINS1-201ENST00000314742 TRIM41Q8WV44 630 aa6.56□□□□□ -1.36
LINS1-201ENST00000314742 ZNF326Q5BKZ1 582 aaKnown RBP6.56□□□□□ -1.36
LINS1-201ENST00000314742 PPP6R1Q9UPN7 881 aa6.56□□□□□ -1.36
LINS1-201ENST00000314742 SAMD1Q6SPF0 538 aaPredicted RBP6.56□□□□□ -1.36
LINS1-201ENST00000314742 PCGF6Q9BYE7 350 aa6.55□□□□□ -1.36
LINS1-201ENST00000314742 RSPH6AQ9H0K4 717 aa6.55□□□□□ -1.36
LINS1-201ENST00000314742 CTTNBP2Q8WZ74 1663 aa6.55□□□□□ -1.36
LINS1-201ENST00000314742 ZEB1P37275 1124 aaPredicted RBP6.55□□□□□ -1.36
LINS1-201ENST00000314742 TNIKQ9UKE5 1360 aa6.54□□□□□ -1.36
LINS1-201ENST00000314742 PBRM1Q86U86 1689 aa6.54□□□□□ -1.36
LINS1-201ENST00000314742 ARID3CA6NKF2 412 aa6.53□□□□□ -1.36
LINS1-201ENST00000314742 PKNOX2Q96KN3 472 aa6.53□□□□□ -1.36
LINS1-201ENST00000314742 CFAP43Q8NDM7 1665 aa6.53□□□□□ -1.36
LINS1-201ENST00000314742 ECM2O94769 699 aaPredicted RBP6.53□□□□□ -1.36
LINS1-201ENST00000314742 ARHGAP35Q9NRY4 1499 aa6.52□□□□□ -1.37
LINS1-201ENST00000314742 FGD5Q6ZNL6 1462 aa6.51□□□□□ -1.37
LINS1-201ENST00000314742 DNMBPQ6XZF7 1577 aa6.51□□□□□ -1.37
LINS1-201ENST00000314742 CLIP1P30622 1438 aa6.51□□□□□ -1.37
LINS1-201ENST00000314742 CCDC136Q96JN2 1154 aa6.51□□□□□ -1.37
LINS1-201ENST00000314742 SAMD9Q5K651 1589 aa6.51□□□□□ -1.37
LINS1-201ENST00000314742 POLA1P09884 1462 aaPredicted RBP6.5□□□□□ -1.37
LINS1-201ENST00000314742 TOPBP1Q92547 1522 aa6.5□□□□□ -1.37
LINS1-201ENST00000314742 THOC2Q8NI27 1593 aaKnown RBP6.5□□□□□ -1.37
LINS1-201ENST00000314742 RAD54L2Q9Y4B4 1467 aa6.5□□□□□ -1.37
LINS1-201ENST00000314742 APBB1O00213 710 aa6.5□□□□□ -1.37
LINS1-201ENST00000314742 GOLGA3Q08378 1498 aa6.49□□□□□ -1.37
LINS1-201ENST00000314742 MAGI3Q5TCQ9 1506 aa6.49□□□□□ -1.37
LINS1-201ENST00000314742 CHGAP10645 457 aaKnown RBP6.48□□□□□ -1.37
LINS1-201ENST00000314742 LAMC3Q9Y6N6 1575 aa6.48□□□□□ -1.37
LINS1-201ENST00000314742 FOXD4L5Q5VV16 416 aaPredicted RBP6.48□□□□□ -1.37
LINS1-201ENST00000314742 FOXD4L4Q8WXT5 416 aaPredicted RBP6.48□□□□□ -1.37
LINS1-201ENST00000314742 PCF11O94913 1555 aaKnown RBP6.48□□□□□ -1.37
LINS1-201ENST00000314742 PSMD1Q99460 953 aa6.47□□□□□ -1.37
LINS1-201ENST00000314742 CUX2O14529 1486 aa6.47□□□□□ -1.37
LINS1-201ENST00000314742 ABCA10Q8WWZ4 1543 aa6.47□□□□□ -1.37
LINS1-201ENST00000314742 CEP164Q9UPV0 1460 aa6.47□□□□□ -1.37
LINS1-201ENST00000314742 IGF1RP08069 1367 aa6.47□□□□□ -1.37
LINS1-201ENST00000314742 ZMYND15Q9H091 742 aa6.47□□□□□ -1.37
LINS1-201ENST00000314742 IRX6P78412 446 aaPredicted RBP6.46□□□□□ -1.38
LINS1-201ENST00000314742 SNAPC4Q5SXM2 1469 aa6.46□□□□□ -1.38
LINS1-201ENST00000314742 EEA1Q15075 1411 aa6.46□□□□□ -1.38
LINS1-201ENST00000314742 CADPSQ9ULU8 1353 aa6.46□□□□□ -1.38
LINS1-201ENST00000314742 BCL11BQ9C0K0 894 aaPredicted RBP6.46□□□□□ -1.38
LINS1-201ENST00000314742 FANCD2Q9BXW9 1451 aa6.45□□□□□ -1.38
LINS1-201ENST00000314742 NAP1L5Q96NT1 182 aaPredicted RBP6.45□□□□□ -1.38
LINS1-201ENST00000314742 TMCO4Q5TGY1 634 aa6.45□□□□□ -1.38
LINS1-201ENST00000314742 PUS7Q96PZ0 661 aaKnown RBP6.44□□□□□ -1.38
LINS1-201ENST00000314742 DENND4BO75064 1496 aaPredicted RBP6.44□□□□□ -1.38
LINS1-201ENST00000314742 KDM5BQ9UGL1 1544 aa6.44□□□□□ -1.38
LINS1-201ENST00000314742 WDR70Q9NW82 654 aa6.43□□□□□ -1.38
LINS1-201ENST00000314742 PTMSP20962 102 aa6.43□□□□□ -1.38
LINS1-201ENST00000314742 CUL7Q14999 1698 aa6.42□□□□□ -1.38
LINS1-201ENST00000314742 VPS8Q8N3P4 1428 aa6.42□□□□□ -1.38
LINS1-201ENST00000314742 KDM6BO15054 1643 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms