RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 KANK4Q5T7N3 995 aaPredicted RBP19.15■□□□□ 0.66
DDX54-202ENST00000314045 FGD5Q6ZNL6 1462 aa19.11■□□□□ 0.65
DDX54-202ENST00000314045 ESF1Q9H501 851 aaKnown RBP19.11■□□□□ 0.65
DDX54-202ENST00000314045 CFTRP13569 1480 aa19.11■□□□□ 0.65
DDX54-202ENST00000314045 CHGAP10645 457 aaKnown RBP19.11■□□□□ 0.65
DDX54-202ENST00000314045 CCNB3Q8WWL7 1395 aa19.1■□□□□ 0.65
DDX54-202ENST00000314045 CC2D2AQ9P2K1 1620 aa19.09■□□□□ 0.65
DDX54-202ENST00000314045 IGF1RP08069 1367 aa19.08■□□□□ 0.64
DDX54-202ENST00000314045 HMGXB3Q12766 1538 aa19.08■□□□□ 0.64
DDX54-202ENST00000314045 CARMIL2Q6F5E8 1435 aa19.07■□□□□ 0.64
DDX54-202ENST00000314045 RAD54L2Q9Y4B4 1467 aa19.06■□□□□ 0.64
DDX54-202ENST00000314045 FMN1Q68DA7 1419 aa19.05■□□□□ 0.64
DDX54-202ENST00000314045 BCANQ96GW7 911 aa19.04■□□□□ 0.64
DDX54-202ENST00000314045 NESP48681 1621 aa19.02■□□□□ 0.64
DDX54-202ENST00000314045 FHOD3Q2V2M9 1422 aa19.02■□□□□ 0.64
DDX54-202ENST00000314045 JPH4Q96JJ6 628 aa19.02■□□□□ 0.63
DDX54-202ENST00000314045 KDM2AQ9Y2K7 1162 aa19■□□□□ 0.63
DDX54-202ENST00000314045 STAG3Q9UJ98 1225 aa18.99■□□□□ 0.63
DDX54-202ENST00000314045 DDX10Q13206 875 aaKnown RBP18.99■□□□□ 0.63
DDX54-202ENST00000314045 GAPVD1Q14C86 1478 aa18.98■□□□□ 0.63
DDX54-202ENST00000314045 ACIN1Q9UKV3 1341 aaKnown RBP18.96■□□□□ 0.63
DDX54-202ENST00000314045 DNAJC5BQ9UF47 199 aa18.95■□□□□ 0.62
DDX54-202ENST00000314045 SYNJ1O43426 1573 aa18.93■□□□□ 0.62
DDX54-202ENST00000314045 PLPPR3Q6T4P5 718 aa18.93■□□□□ 0.62
DDX54-202ENST00000314045 ARHGAP35Q9NRY4 1499 aa18.92■□□□□ 0.62
DDX54-202ENST00000314045 HIRIP3Q9BW71 556 aaPredicted RBP18.91■□□□□ 0.62
DDX54-202ENST00000314045 UNC13AQ9UPW8 1703 aa18.9■□□□□ 0.62
DDX54-202ENST00000314045 SIN3AQ96ST3 1273 aa18.9■□□□□ 0.62
DDX54-202ENST00000314045 AQRO60306 1485 aaKnown RBP eCLIP18.89■□□□□ 0.614e-7■■■■■ 37.5
DDX54-202ENST00000314045 RGL3Q3MIN7 710 aa18.86■□□□□ 0.61
DDX54-202ENST00000314045 CLSPNQ9HAW4 1339 aa18.86■□□□□ 0.61
DDX54-202ENST00000314045 ERICH6Q7L0X2 663 aa18.86■□□□□ 0.61
DDX54-202ENST00000314045 EIF4G2P78344 907 aaKnown RBP eCLIP18.84■□□□□ 0.613e-8■■■■□ 20.3
DDX54-202ENST00000314045 CUX1P39880 1505 aa18.82■□□□□ 0.6
DDX54-202ENST00000314045 PEG3Q9GZU2 1588 aa18.81■□□□□ 0.6
DDX54-202ENST00000314045 SETD5Q9C0A6 1442 aa18.81■□□□□ 0.6
DDX54-202ENST00000314045 TOPBP1Q92547 1522 aa18.81■□□□□ 0.6
DDX54-202ENST00000314045 TOP2BQ02880 1626 aa18.78■□□□□ 0.6
DDX54-202ENST00000314045 POLA1P09884 1462 aaPredicted RBP18.77■□□□□ 0.59
DDX54-202ENST00000314045 EFCAB2Q5VUJ9 269 aa18.76■□□□□ 0.59
DDX54-202ENST00000314045 GTF3C3Q9Y5Q9 886 aa18.76■□□□□ 0.59
DDX54-202ENST00000314045 MRC2Q9UBG0 1479 aa18.75■□□□□ 0.59
DDX54-202ENST00000314045 PTPRGP23470 1445 aa18.75■□□□□ 0.59
DDX54-202ENST00000314045 GRIN2BQ13224 1484 aa18.73■□□□□ 0.59
DDX54-202ENST00000314045 RAB3GAP2Q9H2M9 1393 aa18.73■□□□□ 0.59
DDX54-202ENST00000314045 MIER1Q8N108 512 aa18.72■□□□□ 0.59
DDX54-202ENST00000314045 PRXQ9BXM0 1461 aa18.71■□□□□ 0.59
DDX54-202ENST00000314045 CCDC18Q5T9S5 1454 aa18.7■□□□□ 0.58
DDX54-202ENST00000314045 SENP3Q9H4L4 574 aaPredicted RBP18.7■□□□□ 0.58
DDX54-202ENST00000314045 ARID4BQ4LE39 1312 aaPredicted RBP18.7■□□□□ 0.58
DDX54-202ENST00000314045 KIF21BO75037 1637 aa18.68■□□□□ 0.58
DDX54-202ENST00000314045 OSCARQ8IYS5 282 aa18.68■□□□□ 0.58
DDX54-202ENST00000314045 ERICH3Q5RHP9 1530 aa18.67■□□□□ 0.58
DDX54-202ENST00000314045 HNRNPMP52272 730 aaKnown RBP eCLIP18.67■□□□□ 0.58
DDX54-202ENST00000314045 FAM9BQ8IZU0 186 aa18.67■□□□□ 0.58
DDX54-202ENST00000314045 TIMELESSQ9UNS1 1208 aa18.67■□□□□ 0.58
DDX54-202ENST00000314045 DNMBPQ6XZF7 1577 aa18.65■□□□□ 0.58
DDX54-202ENST00000314045 PKD2Q13563 968 aa18.65■□□□□ 0.58
DDX54-202ENST00000314045 IFT140Q96RY7 1462 aa18.65■□□□□ 0.58
DDX54-202ENST00000314045 FOXD1Q16676 465 aa18.65■□□□□ 0.58
DDX54-202ENST00000314045 HNRNPUQ00839 825 aaKnown RBP eCLIP18.64■□□□□ 0.57
DDX54-202ENST00000314045 CARD11Q9BXL7 1154 aa18.64■□□□□ 0.57
DDX54-202ENST00000314045 LAMC3Q9Y6N6 1575 aa18.64■□□□□ 0.57
DDX54-202ENST00000314045 TMC1Q8TDI8 760 aa18.63■□□□□ 0.57
DDX54-202ENST00000314045 ANKRD30AQ9BXX3 1397 aa18.63■□□□□ 0.57
DDX54-202ENST00000314045 NEFMP07197 916 aa18.63■□□□□ 0.57
DDX54-202ENST00000314045 MPHOSPH9Q99550 1183 aa18.62■□□□□ 0.57
DDX54-202ENST00000314045 PPP1R15AO75807 674 aaPredicted RBP18.62■□□□□ 0.57
DDX54-202ENST00000314045 ARAP1Q96P48 1450 aa18.61■□□□□ 0.57
DDX54-202ENST00000314045 MRS2Q9HD23 443 aa18.6■□□□□ 0.57
DDX54-202ENST00000314045 RSPH4AQ5TD94 716 aa18.6■□□□□ 0.57
DDX54-202ENST00000314045 TRHP20396 242 aaPredicted RBP18.6■□□□□ 0.57
DDX54-202ENST00000314045 GGT6Q6P531 493 aa18.59■□□□□ 0.57
DDX54-202ENST00000314045 NUP155O75694 1391 aa18.59■□□□□ 0.57
DDX54-202ENST00000314045 DCAF11Q8TEB1 546 aa18.59■□□□□ 0.57
DDX54-202ENST00000314045 KANK1Q14678 1352 aa18.58■□□□□ 0.56
DDX54-202ENST00000314045 CYB5RLQ6IPT4 315 aa18.56■□□□□ 0.56
DDX54-202ENST00000314045 ABCA10Q8WWZ4 1543 aa18.55■□□□□ 0.56
DDX54-202ENST00000314045 MLECQ14165 292 aa18.54■□□□□ 0.56
DDX54-202ENST00000314045 SPAG9O60271 1321 aaKnown RBP18.53■□□□□ 0.56
DDX54-202ENST00000314045 SALL2Q9Y467 1007 aaPredicted RBP18.53■□□□□ 0.56
DDX54-202ENST00000314045 CASKIN1Q8WXD9 1431 aa18.52■□□□□ 0.56
DDX54-202ENST00000314045 KIF3BO15066 747 aa18.51■□□□□ 0.55
DDX54-202ENST00000314045 PHLDB1Q86UU1 1377 aa18.49■□□□□ 0.55
DDX54-202ENST00000314045 SNAPC4Q5SXM2 1469 aa18.49■□□□□ 0.55
DDX54-202ENST00000314045 LRRC9Q6ZRR7 1453 aa18.49■□□□□ 0.55
DDX54-202ENST00000314045 MYT1Q01538 1121 aa18.48■□□□□ 0.55
DDX54-202ENST00000314045 CDCA8Q53HL2 280 aa18.48■□□□□ 0.55
DDX54-202ENST00000314045 DAXXQ9UER7 740 aaPredicted RBP18.47■□□□□ 0.55
DDX54-202ENST00000314045 SLC24A1O60721 1099 aa18.47■□□□□ 0.55
DDX54-202ENST00000314045 CANXP27824 592 aaKnown RBP18.47■□□□□ 0.55
DDX54-202ENST00000314045 URB2Q14146 1524 aaKnown RBP18.47■□□□□ 0.55
DDX54-202ENST00000314045 ZNF644Q9H582 1327 aaPredicted RBP18.46■□□□□ 0.55
DDX54-202ENST00000314045 DHX57Q6P158 1386 aaKnown RBP18.45■□□□□ 0.54
DDX54-202ENST00000314045 FGD6Q6ZV73 1430 aa18.45■□□□□ 0.54
DDX54-202ENST00000314045 PRG4Q92954 1404 aaPredicted RBP18.45■□□□□ 0.54
DDX54-202ENST00000314045 WDR43Q15061 677 aaKnown RBP eCLIP18.44■□□□□ 0.54
DDX54-202ENST00000314045 MYOM3Q5VTT5 1437 aa18.44■□□□□ 0.54
DDX54-202ENST00000314045 SCAF1Q9H7N4 1312 aaKnown RBP18.43■□□□□ 0.54
DDX54-202ENST00000314045 L3MBTL2Q969R5 705 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms