RNA–Protein interactions for RNA: ENST00000310931.8

HDLBP-201, Transcript of high density lipoprotein binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDLBP, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-201ENST00000310931 GTF3C3Q9Y5Q9 886 aa13.94□□□□□ -0.18
HDLBP-201ENST00000310931 PBRM1Q86U86 1689 aa13.93□□□□□ -0.18
HDLBP-201ENST00000310931 RTL5Q5HYW3 569 aaPredicted RBP13.93□□□□□ -0.18
HDLBP-201ENST00000310931 CEP162Q5TB80 1403 aa13.91□□□□□ -0.18
HDLBP-201ENST00000310931 CLIP1P30622 1438 aa13.89□□□□□ -0.19
HDLBP-201ENST00000310931 EIF4G3O43432 1585 aaKnown RBP13.88□□□□□ -0.19
HDLBP-201ENST00000310931 ADAMTS12P58397 1594 aa13.88□□□□□ -0.19
HDLBP-201ENST00000310931 APLP2Q06481 763 aa13.88□□□□□ -0.19
HDLBP-201ENST00000310931 AQRO60306 1485 aaKnown RBP eCLIP13.87□□□□□ -0.193e-7■■■■■ 31.7
HDLBP-201ENST00000310931 TRIM26Q12899 539 aaPredicted RBP13.86□□□□□ -0.19
HDLBP-201ENST00000310931 EFCAB5A4FU69 1503 aa13.85□□□□□ -0.19
HDLBP-201ENST00000310931 SYNJ2O15056 1496 aa13.85□□□□□ -0.19
HDLBP-201ENST00000310931 CHMP7Q8WUX9 453 aaPredicted RBP13.83□□□□□ -0.19
HDLBP-201ENST00000310931 SNAPC4Q5SXM2 1469 aa13.83□□□□□ -0.2
HDLBP-201ENST00000310931 DAXXQ9UER7 740 aaPredicted RBP13.82□□□□□ -0.2
HDLBP-201ENST00000310931 ZNF608Q9ULD9 1512 aaPredicted RBP13.82□□□□□ -0.2
HDLBP-201ENST00000310931 CTTNBP2Q8WZ74 1663 aa13.81□□□□□ -0.2
HDLBP-201ENST00000310931 EIF5BO60841 1220 aaKnown RBP13.79□□□□□ -0.2
HDLBP-201ENST00000310931 GRIN2AQ12879 1464 aa13.78□□□□□ -0.2
HDLBP-201ENST00000310931 KIAA0586Q9BVV6 1533 aa13.76□□□□□ -0.21
HDLBP-201ENST00000310931 VPS8Q8N3P4 1428 aa13.76□□□□□ -0.21
HDLBP-201ENST00000310931 IQGAP2Q13576 1575 aa13.74□□□□□ -0.21
HDLBP-201ENST00000310931 FMN1Q68DA7 1419 aa13.73□□□□□ -0.21
HDLBP-201ENST00000310931 CARMIL2Q6F5E8 1435 aa13.72□□□□□ -0.21
HDLBP-201ENST00000310931 FBLN2P98095 1184 aa13.71□□□□□ -0.22
HDLBP-201ENST00000310931 NUP160Q12769 1436 aa13.69□□□□□ -0.22
HDLBP-201ENST00000310931 DIEXFQ68CQ4 756 aaKnown RBP13.69□□□□□ -0.22
HDLBP-201ENST00000310931 UGGT2Q9NYU1 1516 aa13.68□□□□□ -0.22
HDLBP-201ENST00000310931 ACIN1Q9UKV3 1341 aaKnown RBP13.68□□□□□ -0.22
HDLBP-201ENST00000310931 ARHGAP35Q9NRY4 1499 aa13.67□□□□□ -0.22
HDLBP-201ENST00000310931 RANGAP1P46060 587 aaPredicted RBP13.65□□□□□ -0.22
HDLBP-201ENST00000310931 SAMD9Q5K651 1589 aa13.64□□□□□ -0.23
HDLBP-201ENST00000310931 MAP3K1Q13233 1512 aa13.64□□□□□ -0.23
HDLBP-201ENST00000310931 ARAP1Q96P48 1450 aa13.64□□□□□ -0.23
HDLBP-201ENST00000310931 FYCO1Q9BQS8 1478 aa13.62□□□□□ -0.23
HDLBP-201ENST00000310931 GLIPR1L2Q4G1C9 344 aa13.6□□□□□ -0.23
HDLBP-201ENST00000310931 CASKIN1Q8WXD9 1431 aa13.6□□□□□ -0.23
HDLBP-201ENST00000310931 BCANQ96GW7 911 aa13.59□□□□□ -0.23
HDLBP-201ENST00000310931 CEP170Q5SW79 1584 aa13.59□□□□□ -0.23
HDLBP-201ENST00000310931 CCDC18Q5T9S5 1454 aa13.59□□□□□ -0.23
HDLBP-201ENST00000310931 JPH4Q96JJ6 628 aa13.57□□□□□ -0.24
HDLBP-201ENST00000310931 CHD1O14646 1710 aa13.57□□□□□ -0.24
HDLBP-201ENST00000310931 KIAA0556O60303 1618 aa13.56□□□□□ -0.24
HDLBP-201ENST00000310931 CDK11AQ9UQ88 783 aaPredicted RBP13.56□□□□□ -0.24
HDLBP-201ENST00000310931 HECW1Q76N89 1606 aa13.56□□□□□ -0.24
HDLBP-201ENST00000310931 FHOD3Q2V2M9 1422 aa13.55□□□□□ -0.24
HDLBP-201ENST00000310931 SCAF1Q9H7N4 1312 aaKnown RBP13.53□□□□□ -0.24
HDLBP-201ENST00000310931 OSCARQ8IYS5 282 aa13.51□□□□□ -0.25
HDLBP-201ENST00000310931 P3H3Q8IVL6 736 aa13.51□□□□□ -0.25
HDLBP-201ENST00000310931 ATP1B4Q9UN42 357 aaPredicted RBP13.51□□□□□ -0.25
HDLBP-201ENST00000310931 ZNF316A6NFI3 1004 aaPredicted RBP13.51□□□□□ -0.25
HDLBP-201ENST00000310931 PRG4Q92954 1404 aaPredicted RBP13.5□□□□□ -0.25
HDLBP-201ENST00000310931 BCL11AQ9H165 835 aa13.49□□□□□ -0.25
HDLBP-201ENST00000310931 SHROOM2Q13796 1616 aa13.49□□□□□ -0.25
HDLBP-201ENST00000310931 DISP1Q96F81 1524 aa13.48□□□□□ -0.25
HDLBP-201ENST00000310931 TIAM1Q13009 1591 aa13.48□□□□□ -0.25
HDLBP-201ENST00000310931 CLASP1Q7Z460 1538 aa13.48□□□□□ -0.25
HDLBP-201ENST00000310931 PCF11O94913 1555 aaKnown RBP13.48□□□□□ -0.25
HDLBP-201ENST00000310931 CFAP43Q8NDM7 1665 aa13.47□□□□□ -0.25
HDLBP-201ENST00000310931 PTPRGP23470 1445 aa13.47□□□□□ -0.25
HDLBP-201ENST00000310931 MTUS2Q5JR59 1369 aa13.45□□□□□ -0.26
HDLBP-201ENST00000310931 RAPGEF6Q8TEU7 1601 aa13.44□□□□□ -0.26
HDLBP-201ENST00000310931 EHBP1L1Q8N3D4 1523 aa13.44□□□□□ -0.26
HDLBP-201ENST00000310931 LRRC9Q6ZRR7 1453 aa13.42□□□□□ -0.26
HDLBP-201ENST00000310931 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.42□□□□□ -0.26
HDLBP-201ENST00000310931 MYT1LQ9UL68 1186 aa13.39□□□□□ -0.27
HDLBP-201ENST00000310931 EPRSP07814 1512 aaKnown RBP13.39□□□□□ -0.27
HDLBP-201ENST00000310931 UACAQ9BZF9 1416 aa13.39□□□□□ -0.27
HDLBP-201ENST00000310931 HNRNPUL2Q1KMD3 747 aaKnown RBP13.38□□□□□ -0.27
HDLBP-201ENST00000310931 UHRF1BP1LA0JNW5 1464 aa13.37□□□□□ -0.27
HDLBP-201ENST00000310931 ABCA8O94911 1581 aa13.36□□□□□ -0.27
HDLBP-201ENST00000310931 PLEKHD1A6NEE1 506 aa13.36□□□□□ -0.27
HDLBP-201ENST00000310931 SUPT6HQ7KZ85 1726 aaKnown RBP13.36□□□□□ -0.27
HDLBP-201ENST00000310931 NEUROD1Q13562 356 aa13.34□□□□□ -0.27
HDLBP-201ENST00000310931 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.33□□□□□ -0.272e-7■□□□□ 8.8
HDLBP-201ENST00000310931 NPM1P06748 294 aaKnown RBP eCLIP13.33□□□□□ -0.28
HDLBP-201ENST00000310931 ABCC2Q92887 1545 aa13.33□□□□□ -0.28
HDLBP-201ENST00000310931 ANP32EQ9BTT0 268 aa13.32□□□□□ -0.28
HDLBP-201ENST00000310931 NUP153P49790 1475 aaKnown RBP13.32□□□□□ -0.28
HDLBP-201ENST00000310931 TROQ12816 1431 aaPredicted RBP13.32□□□□□ -0.28
HDLBP-201ENST00000310931 RRBP1Q9P2E9 1410 aaKnown RBP13.31□□□□□ -0.28
HDLBP-201ENST00000310931 CCNB3Q8WWL7 1395 aa13.3□□□□□ -0.28
HDLBP-201ENST00000310931 MIA2Q96PC5 1412 aa13.29□□□□□ -0.28
HDLBP-201ENST00000310931 PLB1Q6P1J6 1458 aa13.29□□□□□ -0.28
HDLBP-201ENST00000310931 KANK4Q5T7N3 995 aaPredicted RBP13.28□□□□□ -0.28
HDLBP-201ENST00000310931 CLSPNQ9HAW4 1339 aa13.27□□□□□ -0.28
HDLBP-201ENST00000310931 NCOA2Q15596 1464 aa13.27□□□□□ -0.28
HDLBP-201ENST00000310931 MYOM3Q5VTT5 1437 aa13.27□□□□□ -0.29
HDLBP-201ENST00000310931 KIF14Q15058 1648 aa13.26□□□□□ -0.29
HDLBP-201ENST00000310931 CDK13Q14004 1512 aaKnown RBP13.25□□□□□ -0.29
HDLBP-201ENST00000310931 ITSN2Q9NZM3 1697 aa13.25□□□□□ -0.29
HDLBP-201ENST00000310931 ADCY10Q96PN6 1610 aa13.24□□□□□ -0.29
HDLBP-201ENST00000310931 ATP10BO94823 1461 aa13.24□□□□□ -0.29
HDLBP-201ENST00000310931 ANP32AP39687 249 aaKnown RBP13.23□□□□□ -0.29
HDLBP-201ENST00000310931 FGD6Q6ZV73 1430 aa13.23□□□□□ -0.29
HDLBP-201ENST00000310931 KDM5BQ9UGL1 1544 aa13.22□□□□□ -0.29
HDLBP-201ENST00000310931 NBR1Q14596 966 aa13.22□□□□□ -0.29
HDLBP-201ENST00000310931 ARHGEF11O15085 1522 aa13.21□□□□□ -0.29
HDLBP-201ENST00000310931 FAM50AQ14320 339 aaKnown RBP13.2□□□□□ -0.3
HDLBP-201ENST00000310931 PLEKHH2Q8IVE3 1493 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms